BLASTX nr result

ID: Glycyrrhiza24_contig00009381 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00009381
         (404 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]              73   3e-11
dbj|BAE79382.1| unnamed protein product [Ipomoea batatas]              73   3e-11
ref|YP_006666138.1| RnaseH (mitochondrion) [Malus x domestica] g...    73   3e-11
dbj|BAE79385.1| unnamed protein product [Ipomoea batatas]              72   4e-11
dbj|BAE71259.1| hypothetical protein [Trifolium pratense]              67   2e-09

>dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]
          Length = 1898

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 42/120 (35%), Positives = 66/120 (55%)
 Frame = +1

Query: 1    LIWNCHGLFMRGFHCNLGSASVVLAELRGLTLGFHLARSMTIASILVELDSQVIVHMIRT 180
            L+ N +GL++ G+ CN+G+A+  LAEL GL  G  LA++     ++ E DS+ +V ++R 
Sbjct: 1760 LLRNENGLWVAGYTCNIGTANSFLAELWGLREGLLLAKNRGFTKLIAETDSEAVVQVLRK 1819

Query: 181  WRTHCAHLQPLLAEALGLMEAQDWHCSISHIFREANFCADKLAELGHHGRFQWTVLENPP 360
                      L+ +   L++       ++HI RE N CAD LA LG    +  T+LE PP
Sbjct: 1820 DGPVTPDASILVKDCKLLLD-HFQEIKVTHILREGNQCADFLANLGQSSSWGTTILERPP 1878


>dbj|BAE79382.1| unnamed protein product [Ipomoea batatas]
          Length = 1366

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 42/120 (35%), Positives = 66/120 (55%)
 Frame = +1

Query: 1    LIWNCHGLFMRGFHCNLGSASVVLAELRGLTLGFHLARSMTIASILVELDSQVIVHMIRT 180
            L+ N +GL++ G+ CN+G+A+  LAEL GL  G  LA++     ++ E DS+ +V ++R 
Sbjct: 1228 LLRNENGLWVAGYTCNIGTANSFLAELWGLREGLLLAKNRGFTKLIAETDSEAVVQVLRK 1287

Query: 181  WRTHCAHLQPLLAEALGLMEAQDWHCSISHIFREANFCADKLAELGHHGRFQWTVLENPP 360
                      L+ +   L++       ++HI RE N CAD LA LG    +  T+LE PP
Sbjct: 1288 DGPVTPDASILVKDCKLLLD-HFQEIKVTHILREGNQCADFLANLGQSSSWGTTILERPP 1346


>ref|YP_006666138.1| RnaseH (mitochondrion) [Malus x domestica]
           gi|401661941|emb|CBX33402.1| rnaseH (mitochondrion)
           [Malus x domestica]
          Length = 153

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 41/120 (34%), Positives = 62/120 (51%)
 Frame = +1

Query: 1   LIWNCHGLFMRGFHCNLGSASVVLAELRGLTLGFHLARSMTIASILVELDSQVIVHMIRT 180
           L+ + +G ++ GF  NLG   ++ AEL GL  G  LA      S+ VE+DS  +V ++  
Sbjct: 13  LLRDNNGNWISGFTANLGKGKIIAAELWGLFFGLRLAWMRGFRSVEVEVDSATVVTLVNQ 72

Query: 181 WRTHCAHLQPLLAEALGLMEAQDWHCSISHIFREANFCADKLAELGHHGRFQWTVLENPP 360
                  L  L+      ++  DWHC +SHI+RE NF AD LA +G      +   ++PP
Sbjct: 73  QDNSLHPLHTLIRGCQAYLK-MDWHCKLSHIYREKNFSADYLASIGLTYDLGYFESQSPP 131


>dbj|BAE79385.1| unnamed protein product [Ipomoea batatas]
          Length = 1366

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 42/120 (35%), Positives = 66/120 (55%)
 Frame = +1

Query: 1    LIWNCHGLFMRGFHCNLGSASVVLAELRGLTLGFHLARSMTIASILVELDSQVIVHMIRT 180
            L+ N +GL++ G+ CN+G+A+  LAEL GL  G  LA++     ++ E DS+ +V ++R 
Sbjct: 1228 LLRNENGLWVAGYICNIGTANSFLAELWGLREGLLLAKNRGFTKLIAETDSEAVVQVLRK 1287

Query: 181  WRTHCAHLQPLLAEALGLMEAQDWHCSISHIFREANFCADKLAELGHHGRFQWTVLENPP 360
                      L+ +   L++       ++HI RE N CAD LA LG    +  T+LE PP
Sbjct: 1288 DGPVTPDASILVKDCKLLLD-HFQEIKVTHILREGNQCADFLANLGQSSSWGTTILERPP 1346


>dbj|BAE71259.1| hypothetical protein [Trifolium pratense]
          Length = 553

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 36/108 (33%), Positives = 59/108 (54%)
 Frame = +1

Query: 1   LIWNCHGLFMRGFHCNLGSASVVLAELRGLTLGFHLARSMTIASILVELDSQVIVHMIRT 180
           +I    G ++ GF   LG+ S ++AEL G+  G   AR +   ++ + +DS V+V  I+T
Sbjct: 413 IIRGSQGEWLGGFARGLGNCSAIIAELWGVAEGLSYARRLGFTAVELNVDSVVVVQAIKT 472

Query: 181 WRTHCAHLQPLLAEALGLMEAQDWHCSISHIFREANFCADKLAELGHH 324
            R   +   PL+     +++  DW   I H +RE+N CAD +A +G H
Sbjct: 473 GRFSSSVGLPLVKHIRRMLDL-DWEIKIEHAYRESNKCADAMANIGCH 519


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