BLASTX nr result

ID: Glycyrrhiza24_contig00009245 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00009245
         (718 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003608560.1| hypothetical protein MTR_4g097480 [Medicago ...   237   2e-60
ref|XP_002310885.1| predicted protein [Populus trichocarpa] gi|2...   134   2e-29
emb|CBI19366.3| unnamed protein product [Vitis vinifera]               96   6e-18
ref|XP_002533572.1| conserved hypothetical protein [Ricinus comm...    92   1e-16
ref|XP_002320018.1| predicted protein [Populus trichocarpa] gi|2...    88   2e-15

>ref|XP_003608560.1| hypothetical protein MTR_4g097480 [Medicago truncatula]
           gi|355509615|gb|AES90757.1| hypothetical protein
           MTR_4g097480 [Medicago truncatula]
          Length = 175

 Score =  237 bits (604), Expect = 2e-60
 Identities = 127/187 (67%), Positives = 142/187 (75%), Gaps = 7/187 (3%)
 Frame = +1

Query: 25  MSHRKSHSQGSIPFSWEDKPGVCKTPNNGCPLNITGSSLQAINKKSSSFTLPPS-----S 189
           MSHRKSHS GSIPFSWEDKPG+CKTPNN CPLN       +INKKSSS  L PS     S
Sbjct: 1   MSHRKSHSYGSIPFSWEDKPGICKTPNNECPLN-------SINKKSSS-KLSPSHFDNIS 52

Query: 190 TNNHVETQDKKI--PLPPCLSQQPPRRSTSGKGFRWKEDPFVVAYKECTKSEKSCKLPCK 363
             N +E QDKKI  PLPPC +Q PP+RSTSGKGF+ +EDPF+VAYKECTKS+K+CK+  K
Sbjct: 53  KKNILEFQDKKISIPLPPCQTQ-PPQRSTSGKGFKLQEDPFLVAYKECTKSDKNCKMQSK 111

Query: 364 NKKGGVGLGSNFSSRRSMCIFSCRGANDVKDDSYLKLSQLPRLPADRDRSLTLEHEHKRG 543
           NKKG   +G NF S RS  IFSCR A DVKDDSY+KLS+LPRLPA RDRS  LE E  R 
Sbjct: 112 NKKG---VGFNFVSLRSYSIFSCRSAIDVKDDSYIKLSKLPRLPAHRDRSRMLEEEQHRR 168

Query: 544 FNYQPWL 564
           FNY+PWL
Sbjct: 169 FNYEPWL 175


>ref|XP_002310885.1| predicted protein [Populus trichocarpa] gi|222853788|gb|EEE91335.1|
           predicted protein [Populus trichocarpa]
          Length = 163

 Score =  134 bits (336), Expect = 2e-29
 Identities = 77/167 (46%), Positives = 105/167 (62%), Gaps = 5/167 (2%)
 Frame = +1

Query: 25  MSHRKSHSQGSIPFSWEDKPGVCKTPNNGCPLNITGSSLQAINKKSSSFTLPPSSTNNH- 201
           MSHRK +SQGSIPFSWED PGV K  +    ++I G +   I+  +S    P  S  ++ 
Sbjct: 1   MSHRKVYSQGSIPFSWEDSPGVSKVIHKEYTIDI-GLNAVNISSPTSPILFPRDSDTSYK 59

Query: 202 -VETQDKKIPLPPCLSQ--QPPRRSTSGKGFR-WKEDPFVVAYKECTKSEKSCKLPCKNK 369
            + +   KIPLPPC+S   +PPRRS S KGFR W+EDPF+ AYKECTK+ ++ KL  ++K
Sbjct: 60  VLGSHGIKIPLPPCVSAKIEPPRRSKSVKGFRWWQEDPFLAAYKECTKNGRNGKLSSESK 119

Query: 370 KGGVGLGSNFSSRRSMCIFSCRGANDVKDDSYLKLSQLPRLPADRDR 510
           K           R+S  IFSC+ + DV+DD+ + L+ LP +P DR R
Sbjct: 120 K-----NVRSKLRKSRLIFSCKDSCDVQDDNLVMLANLPAIPRDRVR 161


>emb|CBI19366.3| unnamed protein product [Vitis vinifera]
          Length = 164

 Score = 96.3 bits (238), Expect = 6e-18
 Identities = 62/165 (37%), Positives = 87/165 (52%), Gaps = 3/165 (1%)
 Frame = +1

Query: 25  MSHRKSHSQGSIPFSWEDKPGVCKT--PNNGCPLNITGSSLQAINKKSSSFTLPPSSTNN 198
           M+  K HSQG++PF+WE+KPGVCK    +  CP + TG  +  +         P      
Sbjct: 1   MNQSKIHSQGNVPFAWENKPGVCKARRDDEDCPTD-TGHFVIKLQPP------PCPLEKG 53

Query: 199 HVETQDKKIPLPPCLSQQPPRRSTSGKG-FRWKEDPFVVAYKECTKSEKSCKLPCKNKKG 375
                  +IPLPPC  Q PP R++S KG  R +EDPF+ AYKECTK+ +      K   G
Sbjct: 54  RPSVHGSQIPLPPCTFQGPPSRNSSKKGHLRKQEDPFLAAYKECTKNTR------KGHDG 107

Query: 376 GVGLGSNFSSRRSMCIFSCRGANDVKDDSYLKLSQLPRLPADRDR 510
              LG     R SM   SC+ + +V+DD+ +  S+L  L +  +R
Sbjct: 108 KTHLG-----RSSMFNLSCKHSCNVRDDNLVSKSRLSALVSRVER 147


>ref|XP_002533572.1| conserved hypothetical protein [Ricinus communis]
           gi|223526549|gb|EEF28807.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 146

 Score = 92.0 bits (227), Expect = 1e-16
 Identities = 57/132 (43%), Positives = 73/132 (55%), Gaps = 8/132 (6%)
 Frame = +1

Query: 139 LQAINKKSSSFTLPPSSTNN------HVETQDKKI-PLPPCLSQQPPRRSTSGKGFRW-K 294
           L A +  SS  T P     N       V  QD KI PLPPC   Q PRRSTS KG  W +
Sbjct: 15  LHAFDLSSSPPTSPTPFPRNLGSSFLKVSAQDTKIIPLPPCQKLQLPRRSTSAKGLGWWQ 74

Query: 295 EDPFVVAYKECTKSEKSCKLPCKNKKGGVGLGSNFSSRRSMCIFSCRGANDVKDDSYLKL 474
            DPF+ AYKECTK++++  LP +N K  V    +   +  + IFSC+ + DVKDD+ + L
Sbjct: 75  NDPFLAAYKECTKNQRNGNLPRENNKKNV--FGHKVKKSKLLIFSCKNSCDVKDDNLVNL 132

Query: 475 SQLPRLPADRDR 510
             LP +  DR R
Sbjct: 133 CSLPPIRRDRMR 144


>ref|XP_002320018.1| predicted protein [Populus trichocarpa] gi|222860791|gb|EEE98333.1|
           predicted protein [Populus trichocarpa]
          Length = 151

 Score = 87.8 bits (216), Expect = 2e-15
 Identities = 57/161 (35%), Positives = 82/161 (50%), Gaps = 7/161 (4%)
 Frame = +1

Query: 25  MSHRKSHSQGSIPFSWEDKPGVCKTPNNGCPLNITGSSLQAINKKSSSFTLPPSS---TN 195
           M   K HS+G++PFSWE KPG  K            S    +++++S   L P      +
Sbjct: 1   MKQSKIHSKGNVPFSWEKKPGESKVT----------SHHDYLSRETSVVKLQPPPCPVES 50

Query: 196 NHVETQDKKIPLPPCLSQQP--PRRSTSGKGFR--WKEDPFVVAYKECTKSEKSCKLPCK 363
           + + T D  IPLPPC  Q P  P RS+S +G +    +DPF+ AYKECTK         K
Sbjct: 51  SRISTHDIIIPLPPCTFQAPGAPLRSSSRRGLKKDIDDDPFLAAYKECTK---------K 101

Query: 364 NKKGGVGLGSNFSSRRSMCIFSCRGANDVKDDSYLKLSQLP 486
           +K  G   GS    R      SC+ +  V+DD+ +++SQ+P
Sbjct: 102 DKPVGKDFGSGRRKRAIFDFSSCKQSCSVRDDNLVRVSQVP 142


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