BLASTX nr result

ID: Glycyrrhiza24_contig00009232 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00009232
         (681 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003627845.1| Short internode related sequence [Medicago t...    92   7e-17
ref|XP_003546717.1| PREDICTED: uncharacterized protein LOC100790...    86   5e-15
ref|XP_003542825.1| PREDICTED: uncharacterized protein LOC100777...    78   1e-12
ref|XP_003539250.1| PREDICTED: uncharacterized protein LOC100805...    75   2e-11
ref|XP_003598516.1| Short internodes [Medicago truncatula] gi|35...    70   4e-10

>ref|XP_003627845.1| Short internode related sequence [Medicago truncatula]
           gi|355521867|gb|AET02321.1| Short internode related
           sequence [Medicago truncatula]
          Length = 327

 Score = 92.4 bits (228), Expect = 7e-17
 Identities = 66/132 (50%), Positives = 79/132 (59%), Gaps = 11/132 (8%)
 Frame = -1

Query: 363 MSMLGLRDLLLIAXXXXXXXXXXXXXXXXXPISADHHA---LPSSSALSVGLGIFPLLTT 193
           M+MLGLRDL+LIA                  IS+DH+    LPSSSALSVGLGIFPLLTT
Sbjct: 1   MNMLGLRDLVLIAQTPSSLHNQQNQT-----ISSDHNPNLPLPSSSALSVGLGIFPLLTT 55

Query: 192 TMP---QPHHHNNNDAAPQDCGNTNPNYFWNLKMCHQHQRNKGVMMIN-----VEEDEIE 37
           T P    P+++NNND   QD      + FWNLKMC   Q    VMM+N     VEE++ +
Sbjct: 56  THPHHQNPNNNNNNDNIHQD------SNFWNLKMCQPQQ----VMMMNSSRKRVEEEDDD 105

Query: 36  GSNKHLMMMGCE 1
             NK+L MMGCE
Sbjct: 106 VRNKNL-MMGCE 116


>ref|XP_003546717.1| PREDICTED: uncharacterized protein LOC100790311 [Glycine max]
          Length = 322

 Score = 86.3 bits (212), Expect = 5e-15
 Identities = 59/122 (48%), Positives = 69/122 (56%), Gaps = 6/122 (4%)
 Frame = -1

Query: 363 MSMLGLRDLLLIAXXXXXXXXXXXXXXXXXPISADHHA---LPSSSALSVGLGIFPLLTT 193
           M+MLGLRDL LIA                 PISA+HH+   LPS ++LSVGLGIFPLLT 
Sbjct: 1   MNMLGLRDLFLIAPTPSQLHHHQQHQHQNQPISAEHHSNLPLPSQASLSVGLGIFPLLTV 60

Query: 192 TMPQPHHHNNNDAAPQDCGNTNPNYFWNLKMCHQHQRN---KGVMMINVEEDEIEGSNKH 22
                 H    D A  +  NTN NY WNLKMC   + N   KGVM  N+E+   EGSNK 
Sbjct: 61  PHTNDVHAQVQDCANNNTNNTNTNY-WNLKMCGPTEVNSTRKGVM--NMED---EGSNKQ 114

Query: 21  LM 16
           +M
Sbjct: 115 MM 116


>ref|XP_003542825.1| PREDICTED: uncharacterized protein LOC100777812 [Glycine max]
          Length = 319

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 57/125 (45%), Positives = 69/125 (55%), Gaps = 9/125 (7%)
 Frame = -1

Query: 363 MSMLGLRDLLLIAXXXXXXXXXXXXXXXXXPISADHHA---LPSSSALSVGLGIFPLLTT 193
           M+MLGLRDL+ IA                  ISA+HH+   LPS ++LSVGLGIFPLLT 
Sbjct: 1   MNMLGLRDLVFIAPTPSQLHHHQQHQP----ISAEHHSNLPLPSQASLSVGLGIFPLLTV 56

Query: 192 TMPQPHHHNNNDAAPQDCGNTNPN---YFWNLKMCHQHQRN---KGVMMINVEEDEIEGS 31
                 H N+     QDC N N N    +WNLKMC   + N   KGVM  N+E+   EGS
Sbjct: 57  P-----HTNDVQVQVQDCANNNNNTNTNYWNLKMCGATEVNSTRKGVM--NMED---EGS 106

Query: 30  NKHLM 16
           NK +M
Sbjct: 107 NKQMM 111


>ref|XP_003539250.1| PREDICTED: uncharacterized protein LOC100805228 [Glycine max]
          Length = 331

 Score = 74.7 bits (182), Expect = 2e-11
 Identities = 51/119 (42%), Positives = 65/119 (54%), Gaps = 12/119 (10%)
 Frame = -1

Query: 363 MSMLGLRDLLLIAXXXXXXXXXXXXXXXXXPISA---DHHALPSSSA-LSVGLGIFPLLT 196
           MSMLGLRDL+LIA                   +    ++  LPSS+A LSVG GIFPLLT
Sbjct: 1   MSMLGLRDLVLIAPTPSSLNHHQGQPFSENHTNTHTPNNIPLPSSAASLSVGFGIFPLLT 60

Query: 195 TT--MPQPHHHNNNDAAPQDCGNTNPN---YFWNLKMCHQHQRN---KGVMMINVEEDE 43
            T  +PQ HHH++N+   +  G  N N    +WNLKMC Q   N   KGV+ +   +DE
Sbjct: 61  ATPCVPQSHHHHHNNEVQELGGGANSNTTTNYWNLKMCQQEVNNPPKKGVINVADHDDE 119


>ref|XP_003598516.1| Short internodes [Medicago truncatula] gi|355487564|gb|AES68767.1|
           Short internodes [Medicago truncatula]
          Length = 329

 Score = 70.1 bits (170), Expect = 4e-10
 Identities = 50/131 (38%), Positives = 66/131 (50%), Gaps = 20/131 (15%)
 Frame = -1

Query: 363 MSMLGLRDLLLIAXXXXXXXXXXXXXXXXXP-----ISADH---HALPSSSALSVGLGIF 208
           MSMLGLRDL+LIA                       IS DH   H+LPSS++LSVG GIF
Sbjct: 1   MSMLGLRDLVLIAPSPSSLQHHHQQNQNQNQNQNQPISHDHNSNHSLPSSASLSVGFGIF 60

Query: 207 PLLTTTMPQPHHHNNNDAAPQDCGNTNPNYFWNLKMCHQ-----------HQRNKG-VMM 64
           PLLT T   P   + N+   ++   +N N FWNL+MC +            + N G + M
Sbjct: 61  PLLTATPCMPQQQSQNNEVQEN--PSNNNNFWNLRMCPEVVNLPKKGVITEEENHGKIAM 118

Query: 63  INVEEDEIEGS 31
           +  EE+ + GS
Sbjct: 119 MESEENGVYGS 129


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