BLASTX nr result

ID: Glycyrrhiza24_contig00009177 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00009177
         (721 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003540910.1| PREDICTED: 40S ribosomal protein S20-2-like ...   240   2e-61
gb|AFK45945.1| unknown [Lotus japonicus]                              235   6e-60
ref|XP_003625216.1| 40S ribosomal protein S20-2 [Medicago trunca...   235   6e-60
ref|XP_003521199.1| PREDICTED: 40S ribosomal protein S20-1-like ...   235   8e-60
ref|XP_003605577.1| 40S ribosomal protein S20-2 [Medicago trunca...   235   8e-60

>ref|XP_003540910.1| PREDICTED: 40S ribosomal protein S20-2-like [Glycine max]
           gi|356554377|ref|XP_003545523.1| PREDICTED: 40S
           ribosomal protein S20-2-like [Glycine max]
          Length = 122

 Score =  240 bits (613), Expect = 2e-61
 Identities = 120/122 (98%), Positives = 121/122 (99%)
 Frame = +3

Query: 99  MAYAAMKPTKPGLEESQEQIHKIRITLSSKNVKNLEKVCSDLVRGAKDKRLRVKGPVRMP 278
           MAYAAMKPTKPGLEESQEQIHKIRITLSSKNVKNLEKVC+DLVRGAKDK LRVKGPVRMP
Sbjct: 1   MAYAAMKPTKPGLEESQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKHLRVKGPVRMP 60

Query: 279 TKVLNITTRKSPCGEGTNTWDRFELRVHKRVIDLYSSPDVVKQITSITIEPGVEVEVTIA 458
           TKVLNITTRKSPCGEGTNTWDRFELRVHKRVIDLYSSPDVVKQITSITIEPGVEVEVTIA
Sbjct: 61  TKVLNITTRKSPCGEGTNTWDRFELRVHKRVIDLYSSPDVVKQITSITIEPGVEVEVTIA 120

Query: 459 DA 464
           DA
Sbjct: 121 DA 122


>gb|AFK45945.1| unknown [Lotus japonicus]
          Length = 122

 Score =  235 bits (600), Expect = 6e-60
 Identities = 117/122 (95%), Positives = 121/122 (99%)
 Frame = +3

Query: 99  MAYAAMKPTKPGLEESQEQIHKIRITLSSKNVKNLEKVCSDLVRGAKDKRLRVKGPVRMP 278
           MAYAAMKPTKPGLEES EQIHKIRITLSSK+V+NLEKVCSDL+RGAKDKRLRVKGPVR+P
Sbjct: 1   MAYAAMKPTKPGLEESGEQIHKIRITLSSKHVQNLEKVCSDLIRGAKDKRLRVKGPVRIP 60

Query: 279 TKVLNITTRKSPCGEGTNTWDRFELRVHKRVIDLYSSPDVVKQITSITIEPGVEVEVTIA 458
           TKVLNITTRKSPCGEGTNTWDRFELRVHKRVIDLYSSPDVVKQITSITIEPGVEVEVTIA
Sbjct: 61  TKVLNITTRKSPCGEGTNTWDRFELRVHKRVIDLYSSPDVVKQITSITIEPGVEVEVTIA 120

Query: 459 DA 464
           DA
Sbjct: 121 DA 122


>ref|XP_003625216.1| 40S ribosomal protein S20-2 [Medicago truncatula]
           gi|124360667|gb|ABN08656.1| Ribosomal protein S10,
           eukaryotic and archaeal form [Medicago truncatula]
           gi|355500231|gb|AES81434.1| 40S ribosomal protein S20-2
           [Medicago truncatula]
          Length = 122

 Score =  235 bits (600), Expect = 6e-60
 Identities = 117/122 (95%), Positives = 121/122 (99%)
 Frame = +3

Query: 99  MAYAAMKPTKPGLEESQEQIHKIRITLSSKNVKNLEKVCSDLVRGAKDKRLRVKGPVRMP 278
           MAYAAMKPTKPGLEESQEQIHKIRITLSSK+VKNLEKVC+DLVRGAKDK LRVKGPVRMP
Sbjct: 1   MAYAAMKPTKPGLEESQEQIHKIRITLSSKHVKNLEKVCADLVRGAKDKHLRVKGPVRMP 60

Query: 279 TKVLNITTRKSPCGEGTNTWDRFELRVHKRVIDLYSSPDVVKQITSITIEPGVEVEVTIA 458
           TKVL+ITTRK+PCGEGTNTWDRFELRVHKRVIDLYSSPDVVKQITSITIEPGVEVEVTIA
Sbjct: 61  TKVLHITTRKTPCGEGTNTWDRFELRVHKRVIDLYSSPDVVKQITSITIEPGVEVEVTIA 120

Query: 459 DA 464
           DA
Sbjct: 121 DA 122


>ref|XP_003521199.1| PREDICTED: 40S ribosomal protein S20-1-like [Glycine max]
          Length = 123

 Score =  235 bits (599), Expect = 8e-60
 Identities = 117/120 (97%), Positives = 120/120 (100%)
 Frame = +3

Query: 105 YAAMKPTKPGLEESQEQIHKIRITLSSKNVKNLEKVCSDLVRGAKDKRLRVKGPVRMPTK 284
           YAAMKPTKPGLEESQEQIHKIRITLSSK+VKNLEKVC+DLVRGAKDKRLRVKGPVRMPTK
Sbjct: 4   YAAMKPTKPGLEESQEQIHKIRITLSSKHVKNLEKVCADLVRGAKDKRLRVKGPVRMPTK 63

Query: 285 VLNITTRKSPCGEGTNTWDRFELRVHKRVIDLYSSPDVVKQITSITIEPGVEVEVTIADA 464
           VL+ITTRKSPCGEGTNTWDRFELRVHKRVIDLYSSPDVVKQITSITIEPGVEVEVTIADA
Sbjct: 64  VLHITTRKSPCGEGTNTWDRFELRVHKRVIDLYSSPDVVKQITSITIEPGVEVEVTIADA 123


>ref|XP_003605577.1| 40S ribosomal protein S20-2 [Medicago truncatula]
           gi|355506632|gb|AES87774.1| 40S ribosomal protein S20-2
           [Medicago truncatula] gi|388508260|gb|AFK42196.1|
           unknown [Medicago truncatula]
          Length = 122

 Score =  235 bits (599), Expect = 8e-60
 Identities = 117/122 (95%), Positives = 121/122 (99%)
 Frame = +3

Query: 99  MAYAAMKPTKPGLEESQEQIHKIRITLSSKNVKNLEKVCSDLVRGAKDKRLRVKGPVRMP 278
           MAYAAMKPTKPGLEESQEQIHKIRITLSSK+V+NLEKVCSDLVRGAKDK LRVKGPVRMP
Sbjct: 1   MAYAAMKPTKPGLEESQEQIHKIRITLSSKHVQNLEKVCSDLVRGAKDKHLRVKGPVRMP 60

Query: 279 TKVLNITTRKSPCGEGTNTWDRFELRVHKRVIDLYSSPDVVKQITSITIEPGVEVEVTIA 458
           TKVL+ITTRK+PCGEGTNTWDRFELRVHKRVIDLYSSPDVVKQITSITIEPGVEVEVTIA
Sbjct: 61  TKVLHITTRKTPCGEGTNTWDRFELRVHKRVIDLYSSPDVVKQITSITIEPGVEVEVTIA 120

Query: 459 DA 464
           DA
Sbjct: 121 DA 122


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