BLASTX nr result

ID: Glycyrrhiza24_contig00009156 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00009156
         (1282 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003539022.1| PREDICTED: ethylene-responsive transcription...   129   2e-27
gb|ACU20216.1| unknown [Glycine max]                                  125   2e-26
ref|XP_002299408.1| AP2/ERF domain-containing transcription fact...   119   2e-24
ref|XP_002332694.1| AP2/ERF domain-containing transcription fact...   119   2e-24
gb|ADE41101.1| AP2 domain class transcription factor [Malus x do...   118   4e-24

>ref|XP_003539022.1| PREDICTED: ethylene-responsive transcription factor 5-like [Glycine
            max]
          Length = 276

 Score =  129 bits (324), Expect = 2e-27
 Identities = 73/145 (50%), Positives = 84/145 (57%)
 Frame = +1

Query: 592  VWLGTFDTAIEAAKAYDRAAFKLRGSKAILNFPLXXXXXXXXXXXXXXXXXXXXXXXXXX 771
            VWLGTFDTAIEAAKAYDRAAF+LRGSKAILNFPL                          
Sbjct: 164  VWLGTFDTAIEAAKAYDRAAFRLRGSKAILNFPLEAGADDRKRQREEKVEPVL------- 216

Query: 772  XXXXXXXXXXXXXXXXXXXXXXXEEVVKRIKITDQTEISRISDTPLTPSSWMGFWETDVK 951
                                    EVVKR KI  ++++S I + PLTPSSW+GFW +D  
Sbjct: 217  ------------------------EVVKREKI-GESDVSLIKNNPLTPSSWLGFWGSDAN 251

Query: 952  SVFTVPPLSPLSPHPAIGYRQLMVV 1026
             +FTVPPLSPLSPHPA+G+ QLMVV
Sbjct: 252  GIFTVPPLSPLSPHPALGFPQLMVV 276



 Score = 85.1 bits (209), Expect = 4e-14
 Identities = 66/162 (40%), Positives = 75/162 (46%), Gaps = 19/162 (11%)
 Frame = +2

Query: 41  MANPVELSALNRIKLHLLGELSPLPTPXXXXXXXXXXXXLWFQFDEPPNPXXXXXXXXXX 220
           MAN +E+SALNRIKLHLLGELSPL                  QF EP N           
Sbjct: 1   MANALEVSALNRIKLHLLGELSPLT-----------------QFQEP-NTTSLCSQSSTS 42

Query: 221 XXXXXXXXXXXXXXXXXXXXXXXIIDLETQTSPFDKKP----PQL-----------SRKP 355
                                      +     F+ KP    PQL           SR+P
Sbjct: 43  DSFTTVDQIFSEFLDFPTTTTSSTEQNQFSAFEFEPKPEIIEPQLEFSFPTTRCKSSRRP 102

Query: 356 SLQISLPKKTEWIQFGEPEI---VAKPEPE-EKKKHYRGVRQ 469
           SLQISLPKKTEWIQFGEPE+   V++  P  E+KKHYRGVRQ
Sbjct: 103 SLQISLPKKTEWIQFGEPEVTETVSQSNPNAEEKKHYRGVRQ 144


>gb|ACU20216.1| unknown [Glycine max]
          Length = 276

 Score =  125 bits (314), Expect = 2e-26
 Identities = 72/145 (49%), Positives = 83/145 (57%)
 Frame = +1

Query: 592  VWLGTFDTAIEAAKAYDRAAFKLRGSKAILNFPLXXXXXXXXXXXXXXXXXXXXXXXXXX 771
            VWLGTFDTAIEAAKAYDRAAF+LRGSKAILNFPL                          
Sbjct: 164  VWLGTFDTAIEAAKAYDRAAFRLRGSKAILNFPLEAGADDRKRQREEKVEPVL------- 216

Query: 772  XXXXXXXXXXXXXXXXXXXXXXXEEVVKRIKITDQTEISRISDTPLTPSSWMGFWETDVK 951
                                    EVVKR KI  ++++S I + PLTPSSW+GFW +D  
Sbjct: 217  ------------------------EVVKREKI-GESDVSLIKNNPLTPSSWLGFWGSDAN 251

Query: 952  SVFTVPPLSPLSPHPAIGYRQLMVV 1026
             +FTVPPLSPLSP PA+G+ QLMVV
Sbjct: 252  GIFTVPPLSPLSPPPALGFPQLMVV 276



 Score = 85.1 bits (209), Expect = 4e-14
 Identities = 66/162 (40%), Positives = 75/162 (46%), Gaps = 19/162 (11%)
 Frame = +2

Query: 41  MANPVELSALNRIKLHLLGELSPLPTPXXXXXXXXXXXXLWFQFDEPPNPXXXXXXXXXX 220
           MAN +E+SALNRIKLHLLGELSPL                  QF EP N           
Sbjct: 1   MANALEVSALNRIKLHLLGELSPLT-----------------QFQEP-NTTSLCSQSSTS 42

Query: 221 XXXXXXXXXXXXXXXXXXXXXXXIIDLETQTSPFDKKP----PQL-----------SRKP 355
                                      +     F+ KP    PQL           SR+P
Sbjct: 43  DSFTTVDQIFSEFLDFPTTTTSSTEQNQFSAFEFEPKPEIIEPQLEFSFPTTRCKSSRRP 102

Query: 356 SLQISLPKKTEWIQFGEPEI---VAKPEPE-EKKKHYRGVRQ 469
           SLQISLPKKTEWIQFGEPE+   V++  P  E+KKHYRGVRQ
Sbjct: 103 SLQISLPKKTEWIQFGEPEVTETVSQSNPNAEEKKHYRGVRQ 144


>ref|XP_002299408.1| AP2/ERF domain-containing transcription factor [Populus trichocarpa]
            gi|222846666|gb|EEE84213.1| AP2/ERF domain-containing
            transcription factor [Populus trichocarpa]
          Length = 287

 Score =  119 bits (298), Expect = 2e-24
 Identities = 65/145 (44%), Positives = 79/145 (54%)
 Frame = +1

Query: 592  VWLGTFDTAIEAAKAYDRAAFKLRGSKAILNFPLXXXXXXXXXXXXXXXXXXXXXXXXXX 771
            VWLGTFDTAIEAAKAYD AAF+LRGSKAILNFPL                          
Sbjct: 155  VWLGTFDTAIEAAKAYDSAAFRLRGSKAILNFPLEAGKSNSQQPEQFLETSCKKRKFEGI 214

Query: 772  XXXXXXXXXXXXXXXXXXXXXXXEEVVKRIKITDQTEISRISDTPLTPSSWMGFWETDVK 951
                                    +VVKR   + ++E+  ++  PLTPSSW GFW+ +  
Sbjct: 215  KSSVEGTNSIT------------NKVVKRETSSPESEVKAVASGPLTPSSWKGFWDGETM 262

Query: 952  SVFTVPPLSPLSPHPAIGYRQLMVV 1026
             +F+VPPLSPLSPHP+ GY +LMVV
Sbjct: 263  GIFSVPPLSPLSPHPSFGYSRLMVV 287


>ref|XP_002332694.1| AP2/ERF domain-containing transcription factor [Populus trichocarpa]
            gi|222832948|gb|EEE71425.1| AP2/ERF domain-containing
            transcription factor [Populus trichocarpa]
          Length = 288

 Score =  119 bits (298), Expect = 2e-24
 Identities = 66/145 (45%), Positives = 77/145 (53%)
 Frame = +1

Query: 592  VWLGTFDTAIEAAKAYDRAAFKLRGSKAILNFPLXXXXXXXXXXXXXXXXXXXXXXXXXX 771
            VWLGTFDTAIEAAKAYD AAF+LRGSKAILNFPL                          
Sbjct: 155  VWLGTFDTAIEAAKAYDSAAFRLRGSKAILNFPLEAGKSNSQQPEQFLETSSKKRKIEEI 214

Query: 772  XXXXXXXXXXXXXXXXXXXXXXXEEVVKRIKITDQTEISRISDTPLTPSSWMGFWETDVK 951
                                    +V KR   + +TE+   +  PLTPSSW GFW+ +V 
Sbjct: 215  ESSMESTGSVIT-----------NKVAKRESSSPETEVKAAATEPLTPSSWKGFWDGEVM 263

Query: 952  SVFTVPPLSPLSPHPAIGYRQLMVV 1026
             +F VPPLSPLSPHP+ GY +LMVV
Sbjct: 264  GIFNVPPLSPLSPHPSFGYSRLMVV 288


>gb|ADE41101.1| AP2 domain class transcription factor [Malus x domestica]
          Length = 332

 Score =  118 bits (295), Expect = 4e-24
 Identities = 71/148 (47%), Positives = 81/148 (54%), Gaps = 3/148 (2%)
 Frame = +1

Query: 592  VWLGTFDTAIEAAKAYDRAAFKLRGSKAILNFPLXXXXXXXXXXXXXXXXXXXXXXXXXX 771
            VWLGTFDTAIEAA+AYDRAAFKLRG+KAILNFPL                          
Sbjct: 217  VWLGTFDTAIEAARAYDRAAFKLRGAKAILNFPLEAGKAEPVVSVERKRRREERRDEAKE 276

Query: 772  XXXXXXXXXXXXXXXXXXXXXXXEEVVKRIKITDQTEISRISDTPLTPSSWMGFWET--- 942
                                     VVK+ K+T+         TPLTPSSWM FWE+   
Sbjct: 277  VV-----------------------VVKKEKLTE---------TPLTPSSWMSFWESEKE 304

Query: 943  DVKSVFTVPPLSPLSPHPAIGYRQLMVV 1026
            DVK VF++PPLSPLSPHPA+GY Q+MVV
Sbjct: 305  DVKGVFSIPPLSPLSPHPAMGYPQVMVV 332



 Score = 58.9 bits (141), Expect = 3e-06
 Identities = 35/62 (56%), Positives = 39/62 (62%), Gaps = 8/62 (12%)
 Frame = +2

Query: 308 QTSPFDKKPPQLSRKPSLQISLPKKTEWIQFGEPEIVA-KP-------EPEEKKKHYRGV 463
           QT+P   KP   +RKP+L ISLP KTEWIQF   +  A KP         EEKKKHYRGV
Sbjct: 139 QTAP---KPANPTRKPALTISLPNKTEWIQFASSDQAAEKPAAVQKVSSNEEKKKHYRGV 195

Query: 464 RQ 469
           RQ
Sbjct: 196 RQ 197


Top