BLASTX nr result

ID: Glycyrrhiza24_contig00009147 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00009147
         (962 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003539457.1| PREDICTED: uncharacterized RNA-binding prote...   247   3e-63
ref|XP_003537962.1| PREDICTED: uncharacterized RNA-binding prote...   244   3e-62
ref|XP_003543536.1| PREDICTED: uncharacterized RNA-binding prote...   238   1e-60
ref|XP_003547003.1| PREDICTED: uncharacterized RNA-binding prote...   233   5e-59
ref|XP_003539458.1| PREDICTED: uncharacterized RNA-binding prote...   223   5e-56

>ref|XP_003539457.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
           isoform 1 [Glycine max]
          Length = 401

 Score =  247 bits (630), Expect = 3e-63
 Identities = 128/187 (68%), Positives = 141/187 (75%)
 Frame = +3

Query: 6   VGNLDLNVTEEELKQTFLQFGDIVSVKIHAGKGYGFVQFVTRTSAEEAIQRMQGKMIGQQ 185
           +GNLDLNVTEEELKQ F+QFGDIV VKI+AGKGYG+VQF TR SAE+AIQRMQGK+IGQQ
Sbjct: 218 IGNLDLNVTEEELKQAFVQFGDIVLVKIYAGKGYGYVQFGTRASAEDAIQRMQGKVIGQQ 277

Query: 186 VIQISWGSSTSTARQDLPGGWGPHMDPSQWSXXXXXXXXXXXXXXXTSHDPSLXXXXXXX 365
           VIQISWG ST TARQD+PGGWG  MDPSQWS                +HDPSL       
Sbjct: 278 VIQISWG-STLTARQDVPGGWGAQMDPSQWSAYYGYGQGYESYAYGATHDPSLYAYGAYA 336

Query: 366 XXXXXPQRVEGAQAQDMSAMSVPTEECYDPLTMPDVDKLNTAYLSIHGNAILGRCLWQKT 545
                PQ VEG  AQDMSA+S+P EE YDPL MPDVDKLN AYLSIHG++ILGR LWQ+T
Sbjct: 337 GYAQYPQNVEG--AQDMSAVSMPMEELYDPLAMPDVDKLNAAYLSIHGSSILGRSLWQRT 394

Query: 546 SPFLQQA 566
           S  LQQA
Sbjct: 395 SQSLQQA 401


>ref|XP_003537962.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
           isoform 1 [Glycine max]
          Length = 401

 Score =  244 bits (622), Expect = 3e-62
 Identities = 126/187 (67%), Positives = 141/187 (75%)
 Frame = +3

Query: 6   VGNLDLNVTEEELKQTFLQFGDIVSVKIHAGKGYGFVQFVTRTSAEEAIQRMQGKMIGQQ 185
           +GNLDLNVTEEELKQTF+QFGDIV VKI+AGKGYG+VQF TR SAE+AIQRMQGK+IGQQ
Sbjct: 218 IGNLDLNVTEEELKQTFMQFGDIVLVKIYAGKGYGYVQFGTRVSAEDAIQRMQGKVIGQQ 277

Query: 186 VIQISWGSSTSTARQDLPGGWGPHMDPSQWSXXXXXXXXXXXXXXXTSHDPSLXXXXXXX 365
           VIQISWGSS  TARQD+PGGWG  MDPSQWS                + DPS+       
Sbjct: 278 VIQISWGSS-MTARQDVPGGWGVQMDPSQWSAYYGYGQGYEAYAYGATQDPSIYTYGAYA 336

Query: 366 XXXXXPQRVEGAQAQDMSAMSVPTEECYDPLTMPDVDKLNTAYLSIHGNAILGRCLWQKT 545
                PQ+VEG  AQDMS +S+P EE YDPL MPDVDKLN AYLSIHG++ILGR LWQ+T
Sbjct: 337 GYAQYPQQVEG--AQDMSVVSMPMEELYDPLAMPDVDKLNAAYLSIHGSSILGRSLWQRT 394

Query: 546 SPFLQQA 566
           S  LQQA
Sbjct: 395 SQSLQQA 401


>ref|XP_003543536.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
           isoform 1 [Glycine max]
          Length = 419

 Score =  238 bits (608), Expect = 1e-60
 Identities = 129/193 (66%), Positives = 141/193 (73%), Gaps = 5/193 (2%)
 Frame = +3

Query: 3   FVGNLDLNVTEEELKQTFLQFGDIVSVKIHAGKGYGFVQFVTRTSAEEAIQRMQGKMIGQ 182
           FVGNLDLNV+EEELKQ  LQFG+IVSVKI  GKG+GFVQF TR SAEEAIQ+MQGKMIGQ
Sbjct: 230 FVGNLDLNVSEEELKQNSLQFGEIVSVKIQPGKGFGFVQFGTRASAEEAIQKMQGKMIGQ 289

Query: 183 QVIQISWGSSTSTARQDLPGGWGPHMDPSQWSXXXXXXXXXXXXXXXTSHDPSLXXXXXX 362
           QV++ISWG  T TARQDLPGGWGP MDP+QWS                +HDPSL      
Sbjct: 290 QVVRISWG-RTLTARQDLPGGWGPQMDPNQWSAYYGYGQGYEAYAYGPAHDPSLYAYGAY 348

Query: 363 XXXXXXPQRVEGAQAQDMSAMSVPT----EECYDPLTMPDVDKLNTAYLSIHGNAILGRC 530
                 PQ+VEG  AQD+S MSVPT    EE YDPL MPDVDKLN AYLS+HG+AILGR 
Sbjct: 349 PGYAQYPQQVEG--AQDLSGMSVPTMEQREELYDPLAMPDVDKLNAAYLSVHGSAILGRS 406

Query: 531 LWQKT-SPFLQQA 566
           LWQKT S  LQQA
Sbjct: 407 LWQKTCSSSLQQA 419


>ref|XP_003547003.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
           [Glycine max]
          Length = 404

 Score =  233 bits (594), Expect = 5e-59
 Identities = 126/193 (65%), Positives = 139/193 (72%), Gaps = 5/193 (2%)
 Frame = +3

Query: 3   FVGNLDLNVTEEELKQTFLQFGDIVSVKIHAGKGYGFVQFVTRTSAEEAIQRMQGKMIGQ 182
           FVGNLDLNV+EEELKQ FLQFG+IVSVK+ +GKG GFVQF TR SAEEAIQ+MQ KMIGQ
Sbjct: 215 FVGNLDLNVSEEELKQNFLQFGEIVSVKVQSGKGCGFVQFGTRASAEEAIQKMQEKMIGQ 274

Query: 183 QVIQISWGSSTSTARQDLPGGWGPHMDPSQWSXXXXXXXXXXXXXXXTSHDPSLXXXXXX 362
           QV++ISWG  T TARQDLPGGWGP MDP+QWS                +HDPS       
Sbjct: 275 QVVRISWG-RTLTARQDLPGGWGPQMDPNQWSAYYGYGQGYEAYAYGAAHDPSFYAYGAY 333

Query: 363 XXXXXXPQRVEGAQAQDMSAMSVPT----EECYDPLTMPDVDKLNTAYLSIHGNAILGRC 530
                 PQ+VEG  AQD+S MSVPT    EE YDPL MPDVDKLN AYLS+HG+AILGR 
Sbjct: 334 AGYAQYPQQVEG--AQDLSGMSVPTMEQREELYDPLAMPDVDKLNAAYLSVHGSAILGRL 391

Query: 531 LWQKT-SPFLQQA 566
            WQKT S  LQQA
Sbjct: 392 PWQKTCSTSLQQA 404


>ref|XP_003539458.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
           isoform 2 [Glycine max]
          Length = 392

 Score =  223 bits (568), Expect = 5e-56
 Identities = 122/187 (65%), Positives = 134/187 (71%)
 Frame = +3

Query: 6   VGNLDLNVTEEELKQTFLQFGDIVSVKIHAGKGYGFVQFVTRTSAEEAIQRMQGKMIGQQ 185
           +GNLDLNVTEEELKQ F+QFGDIV VKI+AGKGYG+VQF TR SAE+AIQRMQGK+IGQQ
Sbjct: 218 IGNLDLNVTEEELKQAFVQFGDIVLVKIYAGKGYGYVQFGTRASAEDAIQRMQGKVIGQQ 277

Query: 186 VIQISWGSSTSTARQDLPGGWGPHMDPSQWSXXXXXXXXXXXXXXXTSHDPSLXXXXXXX 365
           VIQISWG ST TARQ         MDPSQWS                +HDPSL       
Sbjct: 278 VIQISWG-STLTARQ---------MDPSQWSAYYGYGQGYESYAYGATHDPSLYAYGAYA 327

Query: 366 XXXXXPQRVEGAQAQDMSAMSVPTEECYDPLTMPDVDKLNTAYLSIHGNAILGRCLWQKT 545
                PQ VEG  AQDMSA+S+P EE YDPL MPDVDKLN AYLSIHG++ILGR LWQ+T
Sbjct: 328 GYAQYPQNVEG--AQDMSAVSMPMEELYDPLAMPDVDKLNAAYLSIHGSSILGRSLWQRT 385

Query: 546 SPFLQQA 566
           S  LQQA
Sbjct: 386 SQSLQQA 392


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