BLASTX nr result

ID: Glycyrrhiza24_contig00009145 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00009145
         (241 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003591129.1| DEAD-box ATP-dependent RNA helicase [Medicag...   120   1e-25
ref|XP_003536072.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   117   1e-24
ref|XP_004143411.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   110   2e-22
emb|CAN71941.1| hypothetical protein VITISV_038912 [Vitis vinifera]   109   2e-22
ref|XP_003635571.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   108   3e-22

>ref|XP_003591129.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
           gi|355480177|gb|AES61380.1| DEAD-box ATP-dependent RNA
           helicase [Medicago truncatula]
          Length = 604

 Score =  120 bits (301), Expect = 1e-25
 Identities = 62/68 (91%), Positives = 64/68 (94%)
 Frame = +2

Query: 38  LGLDSRLVHALLKKGIEKPTPIQRVAIPLILEGKDVVARAKTGSGKTFAYLLPLLQKLFT 217
           LGLD+RLV ALLKK IEKPTPIQ VAIPLILEGKDVVARAKTGSGKT AYLLPLLQKLFT
Sbjct: 30  LGLDARLVRALLKKRIEKPTPIQHVAIPLILEGKDVVARAKTGSGKTLAYLLPLLQKLFT 89

Query: 218 SNVDRKKL 241
           +NVDRKKL
Sbjct: 90  ANVDRKKL 97


>ref|XP_003536072.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 16-like [Glycine
           max]
          Length = 601

 Score =  117 bits (292), Expect = 1e-24
 Identities = 59/68 (86%), Positives = 64/68 (94%)
 Frame = +2

Query: 38  LGLDSRLVHALLKKGIEKPTPIQRVAIPLILEGKDVVARAKTGSGKTFAYLLPLLQKLFT 217
           LG+D+RL+ AL+KK IEKPTPIQRVAIPLILEGKDVVARAKTGSGKT AYLLPLLQKLFT
Sbjct: 27  LGVDARLLRALIKKRIEKPTPIQRVAIPLILEGKDVVARAKTGSGKTLAYLLPLLQKLFT 86

Query: 218 SNVDRKKL 241
           +N DRKKL
Sbjct: 87  ANSDRKKL 94


>ref|XP_004143411.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 16-like [Cucumis
           sativus] gi|449508529|ref|XP_004163338.1| PREDICTED:
           DEAD-box ATP-dependent RNA helicase 16-like [Cucumis
           sativus]
          Length = 596

 Score =  110 bits (274), Expect = 2e-22
 Identities = 56/67 (83%), Positives = 60/67 (89%)
 Frame = +2

Query: 38  LGLDSRLVHALLKKGIEKPTPIQRVAIPLILEGKDVVARAKTGSGKTFAYLLPLLQKLFT 217
           LGLD RLV AL+KK I+KPTPIQ VAIPLILEGKDVVARAKTGSGKTFAYLLPLLQKLFT
Sbjct: 26  LGLDPRLVRALIKKEIQKPTPIQHVAIPLILEGKDVVARAKTGSGKTFAYLLPLLQKLFT 85

Query: 218 SNVDRKK 238
            +  +KK
Sbjct: 86  GSSTKKK 92


>emb|CAN71941.1| hypothetical protein VITISV_038912 [Vitis vinifera]
          Length = 377

 Score =  109 bits (273), Expect = 2e-22
 Identities = 55/68 (80%), Positives = 60/68 (88%)
 Frame = +2

Query: 38  LGLDSRLVHALLKKGIEKPTPIQRVAIPLILEGKDVVARAKTGSGKTFAYLLPLLQKLFT 217
           LGL+  L+ AL+KKGIEKPTPIQ VAIPLILEGKDVVARAKTGSGKTFAYLLPLLQKLF+
Sbjct: 29  LGLEPSLIRALIKKGIEKPTPIQEVAIPLILEGKDVVARAKTGSGKTFAYLLPLLQKLFS 88

Query: 218 SNVDRKKL 241
            +  R KL
Sbjct: 89  ESESRNKL 96


>ref|XP_003635571.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 16-like, partial
           [Vitis vinifera]
          Length = 301

 Score =  108 bits (271), Expect = 3e-22
 Identities = 55/68 (80%), Positives = 59/68 (86%)
 Frame = +2

Query: 38  LGLDSRLVHALLKKGIEKPTPIQRVAIPLILEGKDVVARAKTGSGKTFAYLLPLLQKLFT 217
           LGL+  L+ AL+KKGIEKPTPIQ VAIPLILEGKDVVARAKTGSGKTFAYLLPLLQKLF 
Sbjct: 29  LGLEPSLIRALIKKGIEKPTPIQEVAIPLILEGKDVVARAKTGSGKTFAYLLPLLQKLFC 88

Query: 218 SNVDRKKL 241
            +  R KL
Sbjct: 89  ESESRNKL 96


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