BLASTX nr result

ID: Glycyrrhiza24_contig00009141 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00009141
         (817 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK48249.1| unknown [Lotus japonicus]                              300   3e-79
gb|AFK39165.1| unknown [Lotus japonicus]                              298   1e-78
ref|NP_001236460.1| uncharacterized protein LOC100305515 [Glycin...   295   6e-78
ref|XP_003524501.1| PREDICTED: LOW QUALITY PROTEIN: H/ACA ribonu...   277   1e-73
ref|NP_001235327.1| uncharacterized protein LOC100499993 [Glycin...   271   1e-70

>gb|AFK48249.1| unknown [Lotus japonicus]
          Length = 157

 Score =  300 bits (767), Expect = 3e-79
 Identities = 146/157 (92%), Positives = 157/157 (100%)
 Frame = -1

Query: 748 MGSDSEGEKSVQKEKERKKMLALAPIAKPLAGKKLCKRTLKLVRRAAEHKCLKRGVKEVV 569
           MGSDSEGEKSVQKEKERKK+LA+APIAKPLAGKKLCKRTLKLVRRAAEHKCLKRGVKEVV
Sbjct: 1   MGSDSEGEKSVQKEKERKKLLAVAPIAKPLAGKKLCKRTLKLVRRAAEHKCLKRGVKEVV 60

Query: 568 KSIRRGHKGLCVIAGNISPIDVITHVPILCEESDIPYVYVTSKEDLATAGATKRPTCCVL 389
           KSIRRGHKGLCVIAGNISPIDVITHVP+LCEESD+PYVYVTSKEDLA+AGATKRPTCCVL
Sbjct: 61  KSIRRGHKGLCVIAGNISPIDVITHVPVLCEESDVPYVYVTSKEDLASAGATKRPTCCVL 120

Query: 388 VMTKPAKGEIEQGEQEKLKSDYDQVVSDVTELTSTLF 278
           V+TKPAKGE+E+GEQEKLKSDYDQVVSDVTE+T++LF
Sbjct: 121 VLTKPAKGEMEKGEQEKLKSDYDQVVSDVTEITASLF 157


>gb|AFK39165.1| unknown [Lotus japonicus]
          Length = 157

 Score =  298 bits (763), Expect = 1e-78
 Identities = 145/157 (92%), Positives = 157/157 (100%)
 Frame = -1

Query: 748 MGSDSEGEKSVQKEKERKKMLALAPIAKPLAGKKLCKRTLKLVRRAAEHKCLKRGVKEVV 569
           MGSDSEGEKSVQKEKERKK+LA+APIAKPLAGKKLCKRTLKLVRRAAEHKCLKRGV+EVV
Sbjct: 1   MGSDSEGEKSVQKEKERKKLLAVAPIAKPLAGKKLCKRTLKLVRRAAEHKCLKRGVEEVV 60

Query: 568 KSIRRGHKGLCVIAGNISPIDVITHVPILCEESDIPYVYVTSKEDLATAGATKRPTCCVL 389
           KSIRRGHKGLCVIAGNISPIDVITHVP+LCEESD+PYVYVTSKEDLA+AGATKRPTCCVL
Sbjct: 61  KSIRRGHKGLCVIAGNISPIDVITHVPVLCEESDVPYVYVTSKEDLASAGATKRPTCCVL 120

Query: 388 VMTKPAKGEIEQGEQEKLKSDYDQVVSDVTELTSTLF 278
           V+TKPAKGE+E+GEQEKLKSDYDQVVSDVTE+T++LF
Sbjct: 121 VLTKPAKGEMEKGEQEKLKSDYDQVVSDVTEITASLF 157


>ref|NP_001236460.1| uncharacterized protein LOC100305515 [Glycine max]
           gi|356562662|ref|XP_003549588.1| PREDICTED: H/ACA
           ribonucleoprotein complex subunit 2-like protein-like
           [Glycine max] gi|255625761|gb|ACU13225.1| unknown
           [Glycine max]
          Length = 157

 Score =  295 bits (756), Expect = 6e-78
 Identities = 147/157 (93%), Positives = 153/157 (97%)
 Frame = -1

Query: 748 MGSDSEGEKSVQKEKERKKMLALAPIAKPLAGKKLCKRTLKLVRRAAEHKCLKRGVKEVV 569
           MGSDSE EKSVQKEKE+KKMLALAPIAKPLAGKKLCKRTLKLVRRAAEHKCLKRGVKEVV
Sbjct: 1   MGSDSEAEKSVQKEKEKKKMLALAPIAKPLAGKKLCKRTLKLVRRAAEHKCLKRGVKEVV 60

Query: 568 KSIRRGHKGLCVIAGNISPIDVITHVPILCEESDIPYVYVTSKEDLATAGATKRPTCCVL 389
           KSIRRGHKGLCVIAGNISPIDVITHVPILCEESDIPY+YV SKEDLA AGATKRPTCCVL
Sbjct: 61  KSIRRGHKGLCVIAGNISPIDVITHVPILCEESDIPYIYVPSKEDLAGAGATKRPTCCVL 120

Query: 388 VMTKPAKGEIEQGEQEKLKSDYDQVVSDVTELTSTLF 278
           V TKPAKGEIEQGEQEKLKSDYDQVV++VTELT++LF
Sbjct: 121 VQTKPAKGEIEQGEQEKLKSDYDQVVAEVTELTTSLF 157


>ref|XP_003524501.1| PREDICTED: LOW QUALITY PROTEIN: H/ACA ribonucleoprotein complex
           subunit 2-like protein-like [Glycine max]
          Length = 166

 Score =  277 bits (708), Expect(2) = 1e-73
 Identities = 140/157 (89%), Positives = 147/157 (93%)
 Frame = -1

Query: 748 MGSDSEGEKSVQKEKERKKMLALAPIAKPLAGKKLCKRTLKLVRRAAEHKCLKRGVKEVV 569
           MGSDSE EK      E+KKMLALAPIAKPLAGKKLCKRTLKLVRRAAEHKCLKRGVKEVV
Sbjct: 1   MGSDSEAEK------EKKKMLALAPIAKPLAGKKLCKRTLKLVRRAAEHKCLKRGVKEVV 54

Query: 568 KSIRRGHKGLCVIAGNISPIDVITHVPILCEESDIPYVYVTSKEDLATAGATKRPTCCVL 389
           KSIRRGHKGLCVIAGNISPIDVITH+PILCE+SDIPY+YV SKEDLA AGATKRPTCCVL
Sbjct: 55  KSIRRGHKGLCVIAGNISPIDVITHLPILCEDSDIPYIYVPSKEDLAGAGATKRPTCCVL 114

Query: 388 VMTKPAKGEIEQGEQEKLKSDYDQVVSDVTELTSTLF 278
           V TKPAKGEIEQGEQEKLKSDYDQVVS+VTELT++LF
Sbjct: 115 VQTKPAKGEIEQGEQEKLKSDYDQVVSEVTELTTSLF 151



 Score = 26.2 bits (56), Expect(2) = 1e-73
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = -3

Query: 281 FLKQAQMYLYCWLQLN 234
           F KQA MY+YC  QL+
Sbjct: 151 FXKQAHMYVYCLFQLD 166


>ref|NP_001235327.1| uncharacterized protein LOC100499993 [Glycine max]
           gi|255628377|gb|ACU14533.1| unknown [Glycine max]
          Length = 151

 Score =  271 bits (694), Expect = 1e-70
 Identities = 137/157 (87%), Positives = 145/157 (92%)
 Frame = -1

Query: 748 MGSDSEGEKSVQKEKERKKMLALAPIAKPLAGKKLCKRTLKLVRRAAEHKCLKRGVKEVV 569
           MGSDSE EK      E+KKMLALAPIAKPLAGKKLCKRTLKLVRRAAEHKCLKRGVKEVV
Sbjct: 1   MGSDSEAEK------EKKKMLALAPIAKPLAGKKLCKRTLKLVRRAAEHKCLKRGVKEVV 54

Query: 568 KSIRRGHKGLCVIAGNISPIDVITHVPILCEESDIPYVYVTSKEDLATAGATKRPTCCVL 389
           KSI+RGHKGLCVIAGNISPIDVITH+PILCE+SDIPY+YV SKEDLA AGATKRPTCCVL
Sbjct: 55  KSIKRGHKGLCVIAGNISPIDVITHLPILCEDSDIPYIYVPSKEDLAGAGATKRPTCCVL 114

Query: 388 VMTKPAKGEIEQGEQEKLKSDYDQVVSDVTELTSTLF 278
           V TKP KGEIE+GEQEKLKSDYDQVVS VTELT++LF
Sbjct: 115 VQTKPVKGEIERGEQEKLKSDYDQVVSGVTELTTSLF 151


Top