BLASTX nr result

ID: Glycyrrhiza24_contig00009118 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00009118
         (1289 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001241605.1| uncharacterized protein LOC100788473 [Glycin...   455   e-125
ref|XP_003527856.1| PREDICTED: transcription initiation factor I...   454   e-125
gb|AFK48669.1| unknown [Lotus japonicus]                              442   e-121
gb|ACJ85879.1| unknown [Medicago truncatula] gi|388492442|gb|AFK...   429   e-117
ref|XP_004152667.1| PREDICTED: transcription initiation factor I...   407   e-111

>ref|NP_001241605.1| uncharacterized protein LOC100788473 [Glycine max]
           gi|255646380|gb|ACU23669.1| unknown [Glycine max]
          Length = 262

 Score =  455 bits (1170), Expect = e-125
 Identities = 226/248 (91%), Positives = 232/248 (93%), Gaps = 1/248 (0%)
 Frame = +3

Query: 60  LETTKAERSVWLMKCPLVVAKSWQNHPPSQPLSKVVLSXXXXXXXXXX-SALQFKMEMAG 236
           LETTKAERSVWLMKCPLVVAKSWQ HPPSQPL+KVVLS           SA+QF MEMAG
Sbjct: 15  LETTKAERSVWLMKCPLVVAKSWQAHPPSQPLAKVVLSLDPLHPEEDDPSAVQFTMEMAG 74

Query: 237 TETVNMPKTYSLNMFKDFVPMCIFSETSQGGKVAMEGKVEHKFDMKPHGENIEEYGKLCR 416
           +E VNMPKTYSLNMFKDFVPMC+FSETSQGGKVAMEGKVEHKFDMKPHGENIEEYGKLCR
Sbjct: 75  SEAVNMPKTYSLNMFKDFVPMCVFSETSQGGKVAMEGKVEHKFDMKPHGENIEEYGKLCR 134

Query: 417 ERTKKSEIRNRQIQVIDNDRGVLMRPMPGMVGLVSSNSKDKKKTQPVKQSDTKRTRRDRG 596
           ERT KS I+NRQIQVIDNDRGVLMRPMPGM+GLVSSNSKDKKKTQPVKQSDTKRTRRDRG
Sbjct: 135 ERTNKSMIKNRQIQVIDNDRGVLMRPMPGMIGLVSSNSKDKKKTQPVKQSDTKRTRRDRG 194

Query: 597 ELEDIMFKLFERQPNWALKQLVQETDQPAQFLKEILNELCVYNKRGANQGTYELKPEYKK 776
           ELEDIMFKLFERQPNWALKQLVQETDQPAQFLKEILNELCVYNKRGANQGTYELKPEYKK
Sbjct: 195 ELEDIMFKLFERQPNWALKQLVQETDQPAQFLKEILNELCVYNKRGANQGTYELKPEYKK 254

Query: 777 SVEDTSAE 800
           SVEDTSAE
Sbjct: 255 SVEDTSAE 262


>ref|XP_003527856.1| PREDICTED: transcription initiation factor IIF subunit beta-like
           [Glycine max]
          Length = 262

 Score =  454 bits (1168), Expect = e-125
 Identities = 226/248 (91%), Positives = 231/248 (93%), Gaps = 1/248 (0%)
 Frame = +3

Query: 60  LETTKAERSVWLMKCPLVVAKSWQNHPPSQPLSKVVLSXXXXXXXXXX-SALQFKMEMAG 236
           LETTKAERSVWLMKCPLVVAKSWQ HPPSQPL+KVVLS           SA+QF MEMAG
Sbjct: 15  LETTKAERSVWLMKCPLVVAKSWQTHPPSQPLAKVVLSLDPLHPEEDDPSAVQFTMEMAG 74

Query: 237 TETVNMPKTYSLNMFKDFVPMCIFSETSQGGKVAMEGKVEHKFDMKPHGENIEEYGKLCR 416
           TE VNM KTYSLNMFKDFVPMC+FSETSQGGKVAMEGKVEHKFDMKPHGENIEEYGKLCR
Sbjct: 75  TEAVNMSKTYSLNMFKDFVPMCVFSETSQGGKVAMEGKVEHKFDMKPHGENIEEYGKLCR 134

Query: 417 ERTKKSEIRNRQIQVIDNDRGVLMRPMPGMVGLVSSNSKDKKKTQPVKQSDTKRTRRDRG 596
           ERT KS I+NRQIQVIDNDRGVLMRPMPGM+GLVSSNSKDKKKTQPVKQSDTKRTRRDRG
Sbjct: 135 ERTNKSMIKNRQIQVIDNDRGVLMRPMPGMIGLVSSNSKDKKKTQPVKQSDTKRTRRDRG 194

Query: 597 ELEDIMFKLFERQPNWALKQLVQETDQPAQFLKEILNELCVYNKRGANQGTYELKPEYKK 776
           ELEDIMFKLFERQPNWALKQLVQETDQPAQFLKEILNELCVYNKRGANQGTYELKPEYKK
Sbjct: 195 ELEDIMFKLFERQPNWALKQLVQETDQPAQFLKEILNELCVYNKRGANQGTYELKPEYKK 254

Query: 777 SVEDTSAE 800
           SVEDTSAE
Sbjct: 255 SVEDTSAE 262


>gb|AFK48669.1| unknown [Lotus japonicus]
          Length = 258

 Score =  442 bits (1136), Expect = e-121
 Identities = 218/249 (87%), Positives = 227/249 (91%), Gaps = 2/249 (0%)
 Frame = +3

Query: 60  LETTKAERSVWLMKCPLVVAKSWQNH--PPSQPLSKVVLSXXXXXXXXXXSALQFKMEMA 233
           +ET+KAERSVWLMKCP+VVAKSWQNH   PSQPLSKVVLS          S LQF MEM 
Sbjct: 10  VETSKAERSVWLMKCPVVVAKSWQNHHPSPSQPLSKVVLSLDPLLPEDDPSHLQFTMEMT 69

Query: 234 GTETVNMPKTYSLNMFKDFVPMCIFSETSQGGKVAMEGKVEHKFDMKPHGENIEEYGKLC 413
           G+E VNMPKTY+LNMFKDFVPMC+FSETSQGGKVAMEGKVEHKFDMKPHGENIEEYGKLC
Sbjct: 70  GSEAVNMPKTYALNMFKDFVPMCVFSETSQGGKVAMEGKVEHKFDMKPHGENIEEYGKLC 129

Query: 414 RERTKKSEIRNRQIQVIDNDRGVLMRPMPGMVGLVSSNSKDKKKTQPVKQSDTKRTRRDR 593
           RERT KS I+NRQIQVIDNDRGVLMRPMPGM+GLVSSNSKDKK+TQPVKQSDTKRTRRDR
Sbjct: 130 RERTNKSMIKNRQIQVIDNDRGVLMRPMPGMIGLVSSNSKDKKRTQPVKQSDTKRTRRDR 189

Query: 594 GELEDIMFKLFERQPNWALKQLVQETDQPAQFLKEILNELCVYNKRGANQGTYELKPEYK 773
           GELEDIMFKLFERQPNWALKQLVQETDQPAQFLKEILNELCVYNKRGANQGTYELKPEYK
Sbjct: 190 GELEDIMFKLFERQPNWALKQLVQETDQPAQFLKEILNELCVYNKRGANQGTYELKPEYK 249

Query: 774 KSVEDTSAE 800
           KSVED   E
Sbjct: 250 KSVEDVKVE 258


>gb|ACJ85879.1| unknown [Medicago truncatula] gi|388492442|gb|AFK34287.1| unknown
           [Medicago truncatula]
          Length = 262

 Score =  429 bits (1102), Expect = e-117
 Identities = 210/262 (80%), Positives = 227/262 (86%)
 Frame = +3

Query: 15  MDEEXXXXXXXXXXXLETTKAERSVWLMKCPLVVAKSWQNHPPSQPLSKVVLSXXXXXXX 194
           M++E           LET+KAERSVWLMKCP+ VAKSWQNHPPSQPLSKVV S       
Sbjct: 1   MEDENSYGGSSGGSNLETSKAERSVWLMKCPVAVAKSWQNHPPSQPLSKVVFSIDPLLPE 60

Query: 195 XXXSALQFKMEMAGTETVNMPKTYSLNMFKDFVPMCIFSETSQGGKVAMEGKVEHKFDMK 374
              + LQF MEM+GTE VNMPKTYSLNMFKDFVPMCIFSETS+G KVAMEGKVEHKFDMK
Sbjct: 61  DDPAHLQFTMEMSGTEAVNMPKTYSLNMFKDFVPMCIFSETSEGDKVAMEGKVEHKFDMK 120

Query: 375 PHGENIEEYGKLCRERTKKSEIRNRQIQVIDNDRGVLMRPMPGMVGLVSSNSKDKKKTQP 554
           P  EN+++YGKLCRERTKKS I+NRQ+Q+I +DRG  MRPMPGMVGLVSSN KDKK+TQP
Sbjct: 121 PRHENMDDYGKLCRERTKKSMIKNRQVQIIADDRGTHMRPMPGMVGLVSSNFKDKKRTQP 180

Query: 555 VKQSDTKRTRRDRGELEDIMFKLFERQPNWALKQLVQETDQPAQFLKEILNELCVYNKRG 734
           VKQ+DTKRTRRDRGELEDIMFKLFERQPNWALKQLVQETDQPAQFLKEILNELCVYNKRG
Sbjct: 181 VKQTDTKRTRRDRGELEDIMFKLFERQPNWALKQLVQETDQPAQFLKEILNELCVYNKRG 240

Query: 735 ANQGTYELKPEYKKSVEDTSAE 800
           ANQGTYELKPEYKKSVED +AE
Sbjct: 241 ANQGTYELKPEYKKSVEDANAE 262


>ref|XP_004152667.1| PREDICTED: transcription initiation factor IIF subunit beta-like
           [Cucumis sativus] gi|449520699|ref|XP_004167371.1|
           PREDICTED: transcription initiation factor IIF subunit
           beta-like [Cucumis sativus]
          Length = 260

 Score =  407 bits (1045), Expect = e-111
 Identities = 203/249 (81%), Positives = 219/249 (87%), Gaps = 2/249 (0%)
 Frame = +3

Query: 60  LETTKAERSVWLMKCPLVVAKSWQNHPPSQ--PLSKVVLSXXXXXXXXXXSALQFKMEMA 233
           L+T KA+RSVWLMKCPL+VAKSWQ HPPS   PL+KV+LS          S+LQFKMEMA
Sbjct: 14  LDTGKADRSVWLMKCPLLVAKSWQAHPPSDSLPLAKVILSLDPLQSDES-SSLQFKMEMA 72

Query: 234 GTETVNMPKTYSLNMFKDFVPMCIFSETSQGGKVAMEGKVEHKFDMKPHGENIEEYGKLC 413
           GTET N+PK++SLNMFKDFVPMC+FSE SQG KV+MEGKVEHKFDMKPH EN+E YGKLC
Sbjct: 73  GTETGNVPKSFSLNMFKDFVPMCVFSEASQG-KVSMEGKVEHKFDMKPHSENLEMYGKLC 131

Query: 414 RERTKKSEIRNRQIQVIDNDRGVLMRPMPGMVGLVSSNSKDKKKTQPVKQSDTKRTRRDR 593
           RERT KS ++NRQIQVIDNDRGV MRPMPGMVGL+SS SK+KKK  PVKQSD KRTRRDR
Sbjct: 132 RERTNKSMVKNRQIQVIDNDRGVHMRPMPGMVGLISSTSKEKKKVAPVKQSDVKRTRRDR 191

Query: 594 GELEDIMFKLFERQPNWALKQLVQETDQPAQFLKEILNELCVYNKRGANQGTYELKPEYK 773
           GELEDIMFKLFERQPNWALKQLVQETDQPAQFLKEILNELCVYNKRG NQGTYELKPEYK
Sbjct: 192 GELEDIMFKLFERQPNWALKQLVQETDQPAQFLKEILNELCVYNKRGTNQGTYELKPEYK 251

Query: 774 KSVEDTSAE 800
           KSVEDT  E
Sbjct: 252 KSVEDTGGE 260


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