BLASTX nr result

ID: Glycyrrhiza24_contig00009044 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00009044
         (795 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003536253.1| PREDICTED: uncharacterized protein At4g14450...    99   1e-18
emb|CAN71216.1| hypothetical protein VITISV_033484 [Vitis vinifera]    73   8e-11
emb|CBI23583.3| unnamed protein product [Vitis vinifera]               70   4e-10
ref|XP_002284531.1| PREDICTED: uncharacterized protein At4g14450...    70   4e-10
ref|XP_004163215.1| PREDICTED: uncharacterized protein At4g14450...    65   2e-08

>ref|XP_003536253.1| PREDICTED: uncharacterized protein At4g14450, chloroplastic-like
           [Glycine max]
          Length = 95

 Score = 99.0 bits (245), Expect = 1e-18
 Identities = 55/92 (59%), Positives = 59/92 (64%)
 Frame = +1

Query: 70  MADLQRNDNRQQPSRLQRRAPSSLQINRAVEWNVAIXXXXXXXXXXXXXXXVTEQKPSQD 249
           M++ Q N+NR QPSRLQRRAPSSLQINRAVEWNVAI                 E KP Q+
Sbjct: 1   MSNPQTNNNRHQPSRLQRRAPSSLQINRAVEWNVAIPLLSPLASSPPP----MELKPPQE 56

Query: 250 TSQRHHRGTSEPEKVVVSFKNWQHPAAPFCYE 345
             QR      E EKV VSFK WQHPAAPFCYE
Sbjct: 57  PPQR------EAEKVTVSFKKWQHPAAPFCYE 82


>emb|CAN71216.1| hypothetical protein VITISV_033484 [Vitis vinifera]
          Length = 104

 Score = 72.8 bits (177), Expect = 8e-11
 Identities = 43/87 (49%), Positives = 49/87 (56%), Gaps = 3/87 (3%)
 Frame = +1

Query: 94  NRQQPSRLQRRAPSSLQINRAVEWNVAIXXXXXXXXXXXXXXXV---TEQKPSQDTSQRH 264
           NR+ PSRLQRRAPSSLQI+ A +W VAI               +    E KP ++  Q  
Sbjct: 14  NRRPPSRLQRRAPSSLQISPAADWKVAIPLLSPLATSPSSPKLIDRTAEVKPKEEPRQ-- 71

Query: 265 HRGTSEPEKVVVSFKNWQHPAAPFCYE 345
              T E EK V  FK WQHPAAPFCYE
Sbjct: 72  ---TKEGEKPV--FKKWQHPAAPFCYE 93


>emb|CBI23583.3| unnamed protein product [Vitis vinifera]
          Length = 1287

 Score = 70.5 bits (171), Expect = 4e-10
 Identities = 42/87 (48%), Positives = 48/87 (55%), Gaps = 3/87 (3%)
 Frame = +1

Query: 94   NRQQPSRLQRRAPSSLQINRAVEWNVAIXXXXXXXXXXXXXXXV---TEQKPSQDTSQRH 264
            NR+ PSRLQRRAPSSLQI+ A +W VAI               +    E KP ++  Q  
Sbjct: 1197 NRRPPSRLQRRAPSSLQISPAADWKVAIPLLSPLATSPSSPKLIDRTAEVKPKEEPRQ-- 1254

Query: 265  HRGTSEPEKVVVSFKNWQHPAAPFCYE 345
                 E EK V  FK WQHPAAPFCYE
Sbjct: 1255 ---MKEGEKPV--FKKWQHPAAPFCYE 1276


>ref|XP_002284531.1| PREDICTED: uncharacterized protein At4g14450, chloroplastic-like
           [Vitis vinifera]
          Length = 104

 Score = 70.5 bits (171), Expect = 4e-10
 Identities = 42/87 (48%), Positives = 48/87 (55%), Gaps = 3/87 (3%)
 Frame = +1

Query: 94  NRQQPSRLQRRAPSSLQINRAVEWNVAIXXXXXXXXXXXXXXXV---TEQKPSQDTSQRH 264
           NR+ PSRLQRRAPSSLQI+ A +W VAI               +    E KP ++  Q  
Sbjct: 14  NRRPPSRLQRRAPSSLQISPAADWKVAIPLLSPLATSPSSPKLIDRTAEVKPKEEPRQ-- 71

Query: 265 HRGTSEPEKVVVSFKNWQHPAAPFCYE 345
                E EK V  FK WQHPAAPFCYE
Sbjct: 72  ---MKEGEKPV--FKKWQHPAAPFCYE 93


>ref|XP_004163215.1| PREDICTED: uncharacterized protein At4g14450, chloroplastic-like
           [Cucumis sativus]
          Length = 118

 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 42/96 (43%), Positives = 49/96 (51%), Gaps = 16/96 (16%)
 Frame = +1

Query: 106 PSRLQRRAPSSLQINRAVEWNVAIXXXXXXXXXXXXXXXV------TEQKPSQDTS---- 255
           PSRLQRRAP+SLQINR+ +W VAI               +        ++PS  TS    
Sbjct: 14  PSRLQRRAPASLQINRS-DWKVAIPLLSPLVSPSSSPKDIHSWSTPDSRQPSSTTSSSSH 72

Query: 256 ------QRHHRGTSEPEKVVVSFKNWQHPAAPFCYE 345
                   HH   SEPEK  V FK WQHPAAPF Y+
Sbjct: 73  HHHLHHHHHHHKESEPEKAPV-FKKWQHPAAPFHYD 107


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