BLASTX nr result

ID: Glycyrrhiza24_contig00009008 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00009008
         (1136 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK33567.1| unknown [Lotus japonicus]                              420   e-115
ref|XP_003598631.1| F-box protein SKIP5 [Medicago truncatula] gi...   396   e-108
ref|XP_002269519.1| PREDICTED: F-box protein SKIP5 [Vitis vinife...   367   4e-99
ref|XP_002513076.1| conserved hypothetical protein [Ricinus comm...   357   4e-96
ref|NP_001242768.1| uncharacterized protein LOC100808414 [Glycin...   356   5e-96

>gb|AFK33567.1| unknown [Lotus japonicus]
          Length = 268

 Score =  420 bits (1079), Expect = e-115
 Identities = 216/256 (84%), Positives = 223/256 (87%), Gaps = 9/256 (3%)
 Frame = -2

Query: 979 KRFQRNKTSSSSSP---------INNLDDGCLMHIFSFLPPIPDRFNTALVCHRWNYLAC 827
           KR+QR +TSSSSS          INNLDDGCLMHIFSFLPPIPDRFNTALVCHRWNYLAC
Sbjct: 14  KRWQRKRTSSSSSSSSSSSSSSHINNLDDGCLMHIFSFLPPIPDRFNTALVCHRWNYLAC 73

Query: 826 HPRLWLRVDRSVKDLSDPCVFPNIETAVSASRPGDTILVAAGGSHRVSNIQIKKPLCLIG 647
           HPRLWLRVDRSVKDLS P VFPNIETAVSASRPGDTIL+AAGGSH  SNIQIKKPLCLIG
Sbjct: 74  HPRLWLRVDRSVKDLSQPGVFPNIETAVSASRPGDTILIAAGGSHHTSNIQIKKPLCLIG 133

Query: 646 AGELPDDTTLICSRGSDSAFEFLSTCKLANLTVKAEXXXXXXXXXXXLTVDGCILQCESD 467
           AGELPDDTTLICSRGSDSA E LSTCKLANLTVKAE           LTVDGCILQCES+
Sbjct: 134 AGELPDDTTLICSRGSDSALELLSTCKLANLTVKAELGCCLLHRKGRLTVDGCILQCESN 193

Query: 466 PLDFLSCPIVSTASSSEEVLPSQTKSSSNSDGVFVSQTRIEGGAKAVLTSGDLALQRVRV 287
           PLDFLSCPIVSTA+SS EVLPSQTKS+   DGVFVSQTRIEGGAKAV+TSGDLALQRVRV
Sbjct: 194 PLDFLSCPIVSTANSS-EVLPSQTKSNGGGDGVFVSQTRIEGGAKAVVTSGDLALQRVRV 252

Query: 286 IYARTSLLFWFDVEHM 239
           IYARTSLLFWFDVE M
Sbjct: 253 IYARTSLLFWFDVEQM 268


>ref|XP_003598631.1| F-box protein SKIP5 [Medicago truncatula]
           gi|355487679|gb|AES68882.1| F-box protein SKIP5
           [Medicago truncatula]
          Length = 260

 Score =  396 bits (1017), Expect = e-108
 Identities = 199/247 (80%), Positives = 218/247 (88%)
 Frame = -2

Query: 979 KRFQRNKTSSSSSPINNLDDGCLMHIFSFLPPIPDRFNTALVCHRWNYLACHPRLWLRVD 800
           K+ +R +TS  S  INNLDDGCLMHIFSFL PIPDRFNTALVCHRWNYLACHPRLWLRVD
Sbjct: 17  KKCERKRTSCYSR-INNLDDGCLMHIFSFLSPIPDRFNTALVCHRWNYLACHPRLWLRVD 75

Query: 799 RSVKDLSDPCVFPNIETAVSASRPGDTILVAAGGSHRVSNIQIKKPLCLIGAGELPDDTT 620
           RSVKDLS+P VFPNIETAVSASRPGDTIL+AAGG HRV+NIQI KPLCLIGAGE+PDDT 
Sbjct: 76  RSVKDLSEPGVFPNIETAVSASRPGDTILIAAGGIHRVANIQINKPLCLIGAGEIPDDTM 135

Query: 619 LICSRGSDSAFEFLSTCKLANLTVKAEXXXXXXXXXXXLTVDGCILQCESDPLDFLSCPI 440
           L CSRG DSAFEFLS CKL+NLTVKAE           LT+DGC+LQCES+PLDFLSCPI
Sbjct: 136 LTCSRGLDSAFEFLSNCKLSNLTVKAELGCCLLHRSGRLTIDGCVLQCESNPLDFLSCPI 195

Query: 439 VSTASSSEEVLPSQTKSSSNSDGVFVSQTRIEGGAKAVLTSGDLALQRVRVIYARTSLLF 260
           +STA+SS +++PSQT +S+N DGVFVSQTRIEGGAKAVLTSGDLALQRVRV+YARTSLLF
Sbjct: 196 ISTANSS-DMVPSQT-NSNNGDGVFVSQTRIEGGAKAVLTSGDLALQRVRVVYARTSLLF 253

Query: 259 WFDVEHM 239
           WFDVE M
Sbjct: 254 WFDVEQM 260


>ref|XP_002269519.1| PREDICTED: F-box protein SKIP5 [Vitis vinifera]
           gi|297742690|emb|CBI35143.3| unnamed protein product
           [Vitis vinifera]
          Length = 254

 Score =  367 bits (941), Expect = 4e-99
 Identities = 186/249 (74%), Positives = 209/249 (83%), Gaps = 3/249 (1%)
 Frame = -2

Query: 982 WKRFQRNKTS---SSSSPINNLDDGCLMHIFSFLPPIPDRFNTALVCHRWNYLACHPRLW 812
           WK  + + +S   S+SS I+NLDDGCLMHIFSFL PIPDR+NTALVCHRW+YLACHPRLW
Sbjct: 7   WKHRKSSTSSIPNSNSSSIHNLDDGCLMHIFSFLSPIPDRYNTALVCHRWHYLACHPRLW 66

Query: 811 LRVDRSVKDLSDPCVFPNIETAVSASRPGDTILVAAGGSHRVSNIQIKKPLCLIGAGELP 632
           LRVDRSVKD S+P VFP+IE AVSA+RPGDTIL+AAGGSH  SNIQIKKPLCLIG GELP
Sbjct: 67  LRVDRSVKDSSEPGVFPSIEMAVSAARPGDTILIAAGGSHLASNIQIKKPLCLIGGGELP 126

Query: 631 DDTTLICSRGSDSAFEFLSTCKLANLTVKAEXXXXXXXXXXXLTVDGCILQCESDPLDFL 452
           DDTTL+CSRGSDSA EFLSTCK+ANLTVKAE           LT+DGCILQCES+PLD+L
Sbjct: 127 DDTTLLCSRGSDSALEFLSTCKVANLTVKAELGCCLLHRSGRLTIDGCILQCESNPLDYL 186

Query: 451 SCPIVSTASSSEEVLPSQTKSSSNSDGVFVSQTRIEGGAKAVLTSGDLALQRVRVIYART 272
           SCPIVSTA +  E+L S  K  S+ D V VS+TRIEGGAKAV+TSG LALQRVRVIYART
Sbjct: 187 SCPIVSTA-AGPEILTSSVK--SHGDSVSVSRTRIEGGAKAVVTSGSLALQRVRVIYART 243

Query: 271 SLLFWFDVE 245
           S+ FWFDV+
Sbjct: 244 SIFFWFDVD 252


>ref|XP_002513076.1| conserved hypothetical protein [Ricinus communis]
           gi|223548087|gb|EEF49579.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 250

 Score =  357 bits (915), Expect = 4e-96
 Identities = 177/245 (72%), Positives = 199/245 (81%)
 Frame = -2

Query: 976 RFQRNKTSSSSSPINNLDDGCLMHIFSFLPPIPDRFNTALVCHRWNYLACHPRLWLRVDR 797
           +++R K    +  INNLDDGCLMHIFSFL PIPDR+NTALVCHRW++LACHPRLWLRVDR
Sbjct: 8   KWKRKKKEGDNCRINNLDDGCLMHIFSFLSPIPDRYNTALVCHRWHFLACHPRLWLRVDR 67

Query: 796 SVKDLSDPCVFPNIETAVSASRPGDTILVAAGGSHRVSNIQIKKPLCLIGAGELPDDTTL 617
           S+KD S P VFP+IE AVSA+RPGDTIL++AGGSH  SNIQI KPLCLIG GELPD+T L
Sbjct: 68  SIKDTSQPGVFPSIEMAVSAARPGDTILISAGGSHLASNIQINKPLCLIGGGELPDETML 127

Query: 616 ICSRGSDSAFEFLSTCKLANLTVKAEXXXXXXXXXXXLTVDGCILQCESDPLDFLSCPIV 437
           +CSRGSDSA EFLSTCKLANLTVKAE           LT+D C+LQCESDPLD+LSCPIV
Sbjct: 128 LCSRGSDSALEFLSTCKLANLTVKAELGCCLLHRSGKLTIDSCVLQCESDPLDYLSCPIV 187

Query: 436 STASSSEEVLPSQTKSSSNSDGVFVSQTRIEGGAKAVLTSGDLALQRVRVIYARTSLLFW 257
           STA    EVL +  K  +N D V VSQTRIEGGAKAVLT+GDL LQRVRVIY+RT + FW
Sbjct: 188 STA-GKHEVLSAPMK--TNGDSVTVSQTRIEGGAKAVLTNGDLVLQRVRVIYSRTYVYFW 244

Query: 256 FDVEH 242
           FDV H
Sbjct: 245 FDVGH 249


>ref|NP_001242768.1| uncharacterized protein LOC100808414 [Glycine max]
           gi|255647505|gb|ACU24216.1| unknown [Glycine max]
          Length = 227

 Score =  356 bits (914), Expect = 5e-96
 Identities = 180/218 (82%), Positives = 195/218 (89%), Gaps = 1/218 (0%)
 Frame = -2

Query: 982 WKRFQRNK-TSSSSSPINNLDDGCLMHIFSFLPPIPDRFNTALVCHRWNYLACHPRLWLR 806
           WKR QR K +SSSSS INNLDDGCLMHIF+FLPPIPDRFNTALVCHRWNYLACHPRLWLR
Sbjct: 10  WKRSQRTKPSSSSSSHINNLDDGCLMHIFNFLPPIPDRFNTALVCHRWNYLACHPRLWLR 69

Query: 805 VDRSVKDLSDPCVFPNIETAVSASRPGDTILVAAGGSHRVSNIQIKKPLCLIGAGELPDD 626
           VDRSVK+LS+P VFPNIETAVSASRPGDTIL+AAGG+HRV+NIQI+KPLCLIGAGE+PDD
Sbjct: 70  VDRSVKELSEPGVFPNIETAVSASRPGDTILIAAGGTHRVANIQIRKPLCLIGAGEVPDD 129

Query: 625 TTLICSRGSDSAFEFLSTCKLANLTVKAEXXXXXXXXXXXLTVDGCILQCESDPLDFLSC 446
           TTL+CSRGSDSA EFLSTCKLANLTV+AE           LT+DGCILQCES+PLD+LSC
Sbjct: 130 TTLVCSRGSDSALEFLSTCKLANLTVRAELGCCLLHRKGRLTIDGCILQCESNPLDYLSC 189

Query: 445 PIVSTASSSEEVLPSQTKSSSNSDGVFVSQTRIEGGAK 332
           PIVSTASSS  VLPSQTK S+N DGVFVSQTRIEG  K
Sbjct: 190 PIVSTASSS-VVLPSQTK-SNNGDGVFVSQTRIEGVPK 225


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