BLASTX nr result

ID: Glycyrrhiza24_contig00008982 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00008982
         (1518 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003542685.1| PREDICTED: ribosome biogenesis regulatory pr...   447   e-123
ref|XP_003549765.1| PREDICTED: ribosome biogenesis regulatory pr...   445   e-122
gb|AFK36394.1| unknown [Lotus japonicus]                              431   e-118
ref|XP_003593202.1| Ribosome biogenesis regulatory protein-like ...   386   e-105
ref|XP_004149022.1| PREDICTED: ribosome biogenesis regulatory pr...   384   e-104

>ref|XP_003542685.1| PREDICTED: ribosome biogenesis regulatory protein homolog isoform 1
            [Glycine max]
          Length = 332

 Score =  447 bits (1149), Expect = e-123
 Identities = 229/291 (78%), Positives = 242/291 (83%)
 Frame = -1

Query: 1353 MEIEGEKPKLFEVDLGNLMAFDSRHTFPSQPPPSREDLVNQVLHKGTQLVQAIADALFTL 1174
            ME+EGEK   F+VDLGNLMAFDS HTFPSQP  SREDL+ Q L KGT LVQAIADALF L
Sbjct: 1    MEMEGEKQHKFDVDLGNLMAFDSYHTFPSQPSLSREDLIKQCLLKGTHLVQAIADALFIL 60

Query: 1173 PSTEDVDGXXXXXXXXXXXXPREKHLPKPKPPTKWEVFAQXXXXXXXXXXKIVYDEQSGT 994
            PSTED+DG            PREKHLPKPKPPTKWE FA+          KIVYDEQSGT
Sbjct: 61   PSTEDLDGPLVTLPPPLTKLPREKHLPKPKPPTKWEAFAKKKGIQKRKKDKIVYDEQSGT 120

Query: 993  WKRRHGYDRANDEDAVPIIEAKPTDDPEEDPFAKRKENKKSRVEKQEKNRLQNLKNAAKF 814
            WKRRHGYDRANDE+A+PIIEAKPTDDPEEDPFAKRKENKK+R+EKQEKNRLQNLK AAKF
Sbjct: 121  WKRRHGYDRANDEEAIPIIEAKPTDDPEEDPFAKRKENKKNRIEKQEKNRLQNLKEAAKF 180

Query: 813  GALPSHVQLAATALPITGTQAAPKKVTKDELGNVXXXXXXXXXXXGKFDKKLPGEKPAQH 634
            GALPSHVQLAATALPITGTQAAPKKVTKDELGNV           GKFDKKL GEKP +H
Sbjct: 181  GALPSHVQLAATALPITGTQAAPKKVTKDELGNVAGIAATATASGGKFDKKLAGEKPQKH 240

Query: 633  KGKYRKFLPVVEGTGIGSQEREQTEKILNKIISKNSHDILNVDKAVTMHNV 481
            +GKYRKFLPVVEGTGIGS EREQTEKILNKIISKNSH+ILNV+KAVTMHNV
Sbjct: 241  EGKYRKFLPVVEGTGIGSLEREQTEKILNKIISKNSHNILNVEKAVTMHNV 291


>ref|XP_003549765.1| PREDICTED: ribosome biogenesis regulatory protein homolog [Glycine
            max]
          Length = 331

 Score =  445 bits (1144), Expect = e-122
 Identities = 228/289 (78%), Positives = 239/289 (82%)
 Frame = -1

Query: 1347 IEGEKPKLFEVDLGNLMAFDSRHTFPSQPPPSREDLVNQVLHKGTQLVQAIADALFTLPS 1168
            +E EK   F+VDLGNLMAFDS HTFPSQPP SREDL  Q L KGT LVQAIADALFTLPS
Sbjct: 1    MEAEKQHQFDVDLGNLMAFDSYHTFPSQPPLSREDLTRQCLLKGTHLVQAIADALFTLPS 60

Query: 1167 TEDVDGXXXXXXXXXXXXPREKHLPKPKPPTKWEVFAQXXXXXXXXXXKIVYDEQSGTWK 988
             EDVDG            PREKHLPKPKPPTKWE FA+          KIVYDEQSGTWK
Sbjct: 61   IEDVDGPLVTLPPPTTKLPREKHLPKPKPPTKWEAFAKKKGIQKRKKDKIVYDEQSGTWK 120

Query: 987  RRHGYDRANDEDAVPIIEAKPTDDPEEDPFAKRKENKKSRVEKQEKNRLQNLKNAAKFGA 808
            RRHGYDRANDEDA+PIIEAKPTDDPEEDPFAKRKENKK+R+EKQEKNRLQNLK AAKFGA
Sbjct: 121  RRHGYDRANDEDAIPIIEAKPTDDPEEDPFAKRKENKKNRIEKQEKNRLQNLKEAAKFGA 180

Query: 807  LPSHVQLAATALPITGTQAAPKKVTKDELGNVXXXXXXXXXXXGKFDKKLPGEKPAQHKG 628
            LPSH+QLAATALPITGTQAAPKKVTKDELGNV           GKFDKKL GEKP +H+G
Sbjct: 181  LPSHIQLAATALPITGTQAAPKKVTKDELGNVAGIAATATASGGKFDKKLAGEKPQKHEG 240

Query: 627  KYRKFLPVVEGTGIGSQEREQTEKILNKIISKNSHDILNVDKAVTMHNV 481
            KYRKFLPVVEGTGIGS EREQTEKILNKIISKNSH+ILNV+KAVTMHNV
Sbjct: 241  KYRKFLPVVEGTGIGSLEREQTEKILNKIISKNSHNILNVEKAVTMHNV 289


>gb|AFK36394.1| unknown [Lotus japonicus]
          Length = 351

 Score =  431 bits (1109), Expect = e-118
 Identities = 221/292 (75%), Positives = 241/292 (82%), Gaps = 1/292 (0%)
 Frame = -1

Query: 1353 MEIEG-EKPKLFEVDLGNLMAFDSRHTFPSQPPPSREDLVNQVLHKGTQLVQAIADALFT 1177
            MEI+G E  K+FEVDLG+LMAFDS HTFP+QPP SREDLV Q L KGT+LVQAIAD+LFT
Sbjct: 1    MEIDGVEHQKVFEVDLGHLMAFDSHHTFPTQPPLSREDLVKQALQKGTELVQAIADSLFT 60

Query: 1176 LPSTEDVDGXXXXXXXXXXXXPREKHLPKPKPPTKWEVFAQXXXXXXXXXXKIVYDEQSG 997
            LP+TEDVDG            PREKHLPKPKPPTKW+ FA+          K++YDEQSG
Sbjct: 61   LPATEDVDGPLVKLPAPLTRLPREKHLPKPKPPTKWDAFAKKKGIQKKKKDKVLYDEQSG 120

Query: 996  TWKRRHGYDRANDEDAVPIIEAKPTDDPEEDPFAKRKENKKSRVEKQEKNRLQNLKNAAK 817
            TWKRR+GYDRANDEDAVPIIEAK TDDP EDPFAKRKENK++RV+KQEKNRLQNLK AAK
Sbjct: 121  TWKRRYGYDRANDEDAVPIIEAKETDDPTEDPFAKRKENKRNRVDKQEKNRLQNLKEAAK 180

Query: 816  FGALPSHVQLAATALPITGTQAAPKKVTKDELGNVXXXXXXXXXXXGKFDKKLPGEKPAQ 637
            FGALPSHVQLAATALPITGTQAAPKKVTKDELGNV           GKFDKKL GEKP Q
Sbjct: 181  FGALPSHVQLAATALPITGTQAAPKKVTKDELGNVAGIAATSTASGGKFDKKLAGEKPPQ 240

Query: 636  HKGKYRKFLPVVEGTGIGSQEREQTEKILNKIISKNSHDILNVDKAVTMHNV 481
            HKGKYRKFLPV EGTG+GS ER+QTEKILNKI+SKNSHDILNV+KAVT+  V
Sbjct: 241  HKGKYRKFLPVAEGTGMGSLERQQTEKILNKIMSKNSHDILNVNKAVTVQTV 292


>ref|XP_003593202.1| Ribosome biogenesis regulatory protein-like protein [Medicago
            truncatula] gi|355482250|gb|AES63453.1| Ribosome
            biogenesis regulatory protein-like protein [Medicago
            truncatula]
          Length = 327

 Score =  386 bits (992), Expect = e-105
 Identities = 199/286 (69%), Positives = 226/286 (79%), Gaps = 1/286 (0%)
 Frame = -1

Query: 1335 KPKLFEVDLGNLMAFDSRHTF-PSQPPPSREDLVNQVLHKGTQLVQAIADALFTLPSTED 1159
            K   FEVDLGNLMA DS H++ PSQ   SR +LV + L KGT+LVQAIAD+LF LPST+D
Sbjct: 4    KNSSFEVDLGNLMALDSHHSYYPSQQ--SRVELVKECLQKGTELVQAIADSLFILPSTQD 61

Query: 1158 VDGXXXXXXXXXXXXPREKHLPKPKPPTKWEVFAQXXXXXXXXXXKIVYDEQSGTWKRRH 979
            V+G            PREKHLP+PKPPTKW+ FA+          K VYD+QSGTWKRRH
Sbjct: 62   VEGPLVQLPAPSTRLPREKHLPRPKPPTKWDEFAKKKGIINRNKDKQVYDDQSGTWKRRH 121

Query: 978  GYDRANDEDAVPIIEAKPTDDPEEDPFAKRKENKKSRVEKQEKNRLQNLKNAAKFGALPS 799
            GYDRANDE+A+PIIEAKPTDDP+EDPFAKRKENK+ RV+K EKNR+QNLKNAAKFGALPS
Sbjct: 122  GYDRANDEEAIPIIEAKPTDDPDEDPFAKRKENKRGRVDKNEKNRIQNLKNAAKFGALPS 181

Query: 798  HVQLAATALPITGTQAAPKKVTKDELGNVXXXXXXXXXXXGKFDKKLPGEKPAQHKGKYR 619
            HVQLAAT+LPITGT    KKVTKDELG+V           GKFDKKLPGEKP +HKGK R
Sbjct: 182  HVQLAATSLPITGTHVPQKKVTKDELGSVAGFASTATASGGKFDKKLPGEKPPKHKGKNR 241

Query: 618  KFLPVVEGTGIGSQEREQTEKILNKIISKNSHDILNVDKAVTMHNV 481
            KFLPV EGTG+GS+EREQTE ILNKI+SKN+HDILNV+KAVT+ NV
Sbjct: 242  KFLPVAEGTGVGSKEREQTENILNKIMSKNNHDILNVNKAVTVTNV 287


>ref|XP_004149022.1| PREDICTED: ribosome biogenesis regulatory protein homolog [Cucumis
            sativus] gi|449476004|ref|XP_004154612.1| PREDICTED:
            ribosome biogenesis regulatory protein homolog [Cucumis
            sativus]
          Length = 329

 Score =  384 bits (986), Expect = e-104
 Identities = 200/291 (68%), Positives = 228/291 (78%)
 Frame = -1

Query: 1353 MEIEGEKPKLFEVDLGNLMAFDSRHTFPSQPPPSREDLVNQVLHKGTQLVQAIADALFTL 1174
            MEIE + P  F++DLG+LMAF+  H FPS P  SREDLV++ L KGT+LVQ+IA+ LF L
Sbjct: 1    MEIENQHP--FQIDLGHLMAFNPHHQFPSLPS-SREDLVSECLQKGTELVQSIANDLFNL 57

Query: 1173 PSTEDVDGXXXXXXXXXXXXPREKHLPKPKPPTKWEVFAQXXXXXXXXXXKIVYDEQSGT 994
            PSTED DG            PREK LPKPKPPTKWE+FAQ          K VYDEQ+ T
Sbjct: 58   PSTEDRDGPLVRLPPPTTRLPREKPLPKPKPPTKWELFAQKKGIKNRKKDKRVYDEQTHT 117

Query: 993  WKRRHGYDRANDEDAVPIIEAKPTDDPEEDPFAKRKENKKSRVEKQEKNRLQNLKNAAKF 814
            WKRRHGYDRANDED +PIIEAK TD+  EDPFA R+ +KK RVEKQEKNRLQNLK AAK 
Sbjct: 118  WKRRHGYDRANDEDNIPIIEAKMTDESGEDPFAARRADKKKRVEKQEKNRLQNLKQAAKV 177

Query: 813  GALPSHVQLAATALPITGTQAAPKKVTKDELGNVXXXXXXXXXXXGKFDKKLPGEKPAQH 634
            GALPSH+QLAATALPITGTQAAPKK+TKDELGNV           GKFDKK  GEKPA+H
Sbjct: 178  GALPSHIQLAATALPITGTQAAPKKITKDELGNVAGMAATSTASGGKFDKKFAGEKPAKH 237

Query: 633  KGKYRKFLPVVEGTGIGSQEREQTEKILNKIISKNSHDILNVDKAVTMHNV 481
            +GKYRKFLPVVEGTGIGS+EREQTEK+L+++ISKNSH+ILNV+KAV M+NV
Sbjct: 238  QGKYRKFLPVVEGTGIGSREREQTEKVLSRLISKNSHEILNVNKAVNMYNV 288


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