BLASTX nr result

ID: Glycyrrhiza24_contig00008977 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00008977
         (1072 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003549396.1| PREDICTED: uncharacterized protein LOC100791...   142   2e-31
ref|XP_003541338.1| PREDICTED: uncharacterized protein LOC100804...   139   9e-31
gb|AFK36285.1| unknown [Medicago truncatula]                          136   8e-30
ref|XP_003610094.1| U4/U6.U5 small nuclear ribonucleoprotein 27 ...   136   8e-30
ref|XP_004146322.1| PREDICTED: uncharacterized protein LOC101220...   123   7e-26

>ref|XP_003549396.1| PREDICTED: uncharacterized protein LOC100791549 [Glycine max]
          Length = 182

 Score =  142 bits (357), Expect = 2e-31
 Identities = 74/106 (69%), Positives = 77/106 (72%), Gaps = 1/106 (0%)
 Frame = -1

Query: 736 KRHRRDSAEDEHKETKKAVSDFVDGIXXXXXXXXXXXXXXXXXXXXXXXXXXXML-GIPT 560
           KRHRRDSAE++HKETKKAVSDFVDGI                            + GIPT
Sbjct: 77  KRHRRDSAEEDHKETKKAVSDFVDGIVKEQQQKENGDGGEGEAEGSEDELEIMKMFGIPT 136

Query: 559 GFDSTKGKPVPGADVSGVRAVTKRQPRQYMNRRGGFNRPLPAERNR 422
           GFDSTKGKPVPGADVSGVRAVTKRQPRQYMNRRGGFNRPLPAERNR
Sbjct: 137 GFDSTKGKPVPGADVSGVRAVTKRQPRQYMNRRGGFNRPLPAERNR 182


>ref|XP_003541338.1| PREDICTED: uncharacterized protein LOC100804021 [Glycine max]
          Length = 184

 Score =  139 bits (351), Expect = 9e-31
 Identities = 74/108 (68%), Positives = 77/108 (71%), Gaps = 3/108 (2%)
 Frame = -1

Query: 736 KRHRRDSAEDEHKETKKAVSDFVDGIXXXXXXXXXXXXXXXXXXXXXXXXXXXML---GI 566
           KRHRRDS E+EHKETKKAVSDFVDGI                           M+   GI
Sbjct: 77  KRHRRDSTEEEHKETKKAVSDFVDGIVKEQQQKQQKDNGDGGGEAEGNEDELEMMKMFGI 136

Query: 565 PTGFDSTKGKPVPGADVSGVRAVTKRQPRQYMNRRGGFNRPLPAERNR 422
           PTGFDSTKGKPVPGADVSGVRAVTKRQPRQYMNRRGGFNRPLPAE+NR
Sbjct: 137 PTGFDSTKGKPVPGADVSGVRAVTKRQPRQYMNRRGGFNRPLPAEKNR 184


>gb|AFK36285.1| unknown [Medicago truncatula]
          Length = 186

 Score =  136 bits (343), Expect = 8e-30
 Identities = 72/108 (66%), Positives = 75/108 (69%), Gaps = 3/108 (2%)
 Frame = -1

Query: 736 KRHRRDSAEDE---HKETKKAVSDFVDGIXXXXXXXXXXXXXXXXXXXXXXXXXXXMLGI 566
           KRHRRDS +DE   HKETKK VSDFVDGI                           M+GI
Sbjct: 79  KRHRRDSVDDEPKEHKETKKVVSDFVDGIAKEQQQQKQKENGEEVDVNEDEIEMMKMMGI 138

Query: 565 PTGFDSTKGKPVPGADVSGVRAVTKRQPRQYMNRRGGFNRPLPAERNR 422
           P GFDSTKGKPVPGADVSGVRAVTKRQPRQYMNRRGGFNRPLPAE+NR
Sbjct: 139 PVGFDSTKGKPVPGADVSGVRAVTKRQPRQYMNRRGGFNRPLPAEKNR 186


>ref|XP_003610094.1| U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein [Medicago
           truncatula] gi|355511149|gb|AES92291.1| U4/U6.U5 small
           nuclear ribonucleoprotein 27 kDa protein [Medicago
           truncatula]
          Length = 186

 Score =  136 bits (343), Expect = 8e-30
 Identities = 72/108 (66%), Positives = 75/108 (69%), Gaps = 3/108 (2%)
 Frame = -1

Query: 736 KRHRRDSAEDE---HKETKKAVSDFVDGIXXXXXXXXXXXXXXXXXXXXXXXXXXXMLGI 566
           KRHRRDS +DE   HKETKK VSDFVDGI                           M+GI
Sbjct: 79  KRHRRDSVDDEPKEHKETKKVVSDFVDGIAKEQQQQKQKENGEEVDVNEDEIEMMKMMGI 138

Query: 565 PTGFDSTKGKPVPGADVSGVRAVTKRQPRQYMNRRGGFNRPLPAERNR 422
           P GFDSTKGKPVPGADVSGVRAVTKRQPRQYMNRRGGFNRPLPAE+NR
Sbjct: 139 PVGFDSTKGKPVPGADVSGVRAVTKRQPRQYMNRRGGFNRPLPAEKNR 186


>ref|XP_004146322.1| PREDICTED: uncharacterized protein LOC101220695 isoform 1 [Cucumis
           sativus] gi|449457173|ref|XP_004146323.1| PREDICTED:
           uncharacterized protein LOC101220695 isoform 2 [Cucumis
           sativus] gi|449502931|ref|XP_004161783.1| PREDICTED:
           uncharacterized LOC101220695 isoform 1 [Cucumis sativus]
           gi|449502935|ref|XP_004161784.1| PREDICTED:
           uncharacterized LOC101220695 isoform 2 [Cucumis sativus]
          Length = 232

 Score =  123 bits (309), Expect = 7e-26
 Identities = 67/112 (59%), Positives = 70/112 (62%), Gaps = 7/112 (6%)
 Frame = -1

Query: 736 KRHRRDSAEDEHKETKKAVSDFVDGIXXXXXXXXXXXXXXXXXXXXXXXXXXXM------ 575
           KRHRRD   D+ KE +KAVSDFVDGI                                  
Sbjct: 121 KRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKDNVGGGEVVEEAMADEDEMEMMK 180

Query: 574 -LGIPTGFDSTKGKPVPGADVSGVRAVTKRQPRQYMNRRGGFNRPLPAERNR 422
            LGIP GFDSTKGKPVPGADVSGVR VTKRQPRQYMNRRGGFNRPLPAER+R
Sbjct: 181 KLGIPVGFDSTKGKPVPGADVSGVRVVTKRQPRQYMNRRGGFNRPLPAERSR 232


Top