BLASTX nr result

ID: Glycyrrhiza24_contig00008929 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00008929
         (260 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003527808.1| PREDICTED: DDB1- and CUL4-associated factor ...   152   4e-35
ref|XP_003523712.1| PREDICTED: DDB1- and CUL4-associated factor ...   148   5e-34
ref|XP_002528006.1| conserved hypothetical protein [Ricinus comm...   145   4e-33
ref|XP_002280997.2| PREDICTED: DDB1- and CUL4-associated factor ...   142   3e-32
ref|XP_002330835.1| predicted protein [Populus trichocarpa] gi|2...   140   8e-32

>ref|XP_003527808.1| PREDICTED: DDB1- and CUL4-associated factor homolog 1-like [Glycine
            max]
          Length = 1868

 Score =  152 bits (383), Expect = 4e-35
 Identities = 73/86 (84%), Positives = 76/86 (88%)
 Frame = -1

Query: 260  CKAARFSNSGTAFAALSSESAQREILLYDIQRCELISKFSDTSTNFTGRGHVYSLIHFSP 81
            CKAARFSNSG  FAALSSESA+REILLYDIQ C + SK SDT    TGRGHVYSLIHF+P
Sbjct: 1536 CKAARFSNSGNVFAALSSESARREILLYDIQTCHIESKLSDTFAASTGRGHVYSLIHFNP 1595

Query: 80   SDSMLLWNGVLWDRRVSGPVHRFDQF 3
            SDSMLLWNGVLWDRRVSGPVHRFDQF
Sbjct: 1596 SDSMLLWNGVLWDRRVSGPVHRFDQF 1621


>ref|XP_003523712.1| PREDICTED: DDB1- and CUL4-associated factor homolog 1-like [Glycine
            max]
          Length = 1857

 Score =  148 bits (373), Expect = 5e-34
 Identities = 72/86 (83%), Positives = 74/86 (86%)
 Frame = -1

Query: 260  CKAARFSNSGTAFAALSSESAQREILLYDIQRCELISKFSDTSTNFTGRGHVYSLIHFSP 81
            CKAARFSNSG  FAALSSESA+REI LYDIQ C L S FSDT    TGRGHVYSLIHF+P
Sbjct: 1525 CKAARFSNSGNVFAALSSESARREIRLYDIQTCHLESNFSDTFAASTGRGHVYSLIHFNP 1584

Query: 80   SDSMLLWNGVLWDRRVSGPVHRFDQF 3
            SDSMLLWNGVLWDRR SGPVHRFDQF
Sbjct: 1585 SDSMLLWNGVLWDRRDSGPVHRFDQF 1610


>ref|XP_002528006.1| conserved hypothetical protein [Ricinus communis]
            gi|223532632|gb|EEF34418.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1871

 Score =  145 bits (365), Expect = 4e-33
 Identities = 67/86 (77%), Positives = 75/86 (87%)
 Frame = -1

Query: 260  CKAARFSNSGTAFAALSSESAQREILLYDIQRCELISKFSDTSTNFTGRGHVYSLIHFSP 81
            CKAARFSNSG  FA L+ E A+REILLYD+Q C++ S  SDT ++FTGRGHVYSLIHFSP
Sbjct: 1534 CKAARFSNSGNVFATLTVEPARREILLYDVQTCQVESTLSDTVSSFTGRGHVYSLIHFSP 1593

Query: 80   SDSMLLWNGVLWDRRVSGPVHRFDQF 3
            SD+MLLWNGVLWDRR SGPVHRFDQF
Sbjct: 1594 SDTMLLWNGVLWDRRQSGPVHRFDQF 1619


>ref|XP_002280997.2| PREDICTED: DDB1- and CUL4-associated factor homolog 1-like [Vitis
            vinifera]
          Length = 2024

 Score =  142 bits (358), Expect = 3e-32
 Identities = 68/86 (79%), Positives = 75/86 (87%)
 Frame = -1

Query: 260  CKAARFSNSGTAFAALSSESAQREILLYDIQRCELISKFSDTSTNFTGRGHVYSLIHFSP 81
            CKAARFSNSGT FAALSSES++REIL+YDIQ  +L  K +DTS +  GRGHVY LIHFSP
Sbjct: 1690 CKAARFSNSGTIFAALSSESSRREILVYDIQTLQLDLKLADTSASSAGRGHVYPLIHFSP 1749

Query: 80   SDSMLLWNGVLWDRRVSGPVHRFDQF 3
            SD+MLLWNGVLWDRR SGPVHRFDQF
Sbjct: 1750 SDTMLLWNGVLWDRRGSGPVHRFDQF 1775


>ref|XP_002330835.1| predicted protein [Populus trichocarpa] gi|222872637|gb|EEF09768.1|
            predicted protein [Populus trichocarpa]
          Length = 1791

 Score =  140 bits (354), Expect = 8e-32
 Identities = 64/86 (74%), Positives = 74/86 (86%)
 Frame = -1

Query: 260  CKAARFSNSGTAFAALSSESAQREILLYDIQRCELISKFSDTSTNFTGRGHVYSLIHFSP 81
            CKAA FSNSG  FAAL++E A+REI+LYD+Q C + S  SDT ++ TGRGHVYSL+HFSP
Sbjct: 1457 CKAATFSNSGNVFAALTTEQARREIMLYDVQTCHVESTLSDTVSSSTGRGHVYSLVHFSP 1516

Query: 80   SDSMLLWNGVLWDRRVSGPVHRFDQF 3
            SD+MLLWNGVLWDRR SGPVHRFDQF
Sbjct: 1517 SDTMLLWNGVLWDRRQSGPVHRFDQF 1542