BLASTX nr result
ID: Glycyrrhiza24_contig00008929
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza24_contig00008929 (260 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003527808.1| PREDICTED: DDB1- and CUL4-associated factor ... 152 4e-35 ref|XP_003523712.1| PREDICTED: DDB1- and CUL4-associated factor ... 148 5e-34 ref|XP_002528006.1| conserved hypothetical protein [Ricinus comm... 145 4e-33 ref|XP_002280997.2| PREDICTED: DDB1- and CUL4-associated factor ... 142 3e-32 ref|XP_002330835.1| predicted protein [Populus trichocarpa] gi|2... 140 8e-32 >ref|XP_003527808.1| PREDICTED: DDB1- and CUL4-associated factor homolog 1-like [Glycine max] Length = 1868 Score = 152 bits (383), Expect = 4e-35 Identities = 73/86 (84%), Positives = 76/86 (88%) Frame = -1 Query: 260 CKAARFSNSGTAFAALSSESAQREILLYDIQRCELISKFSDTSTNFTGRGHVYSLIHFSP 81 CKAARFSNSG FAALSSESA+REILLYDIQ C + SK SDT TGRGHVYSLIHF+P Sbjct: 1536 CKAARFSNSGNVFAALSSESARREILLYDIQTCHIESKLSDTFAASTGRGHVYSLIHFNP 1595 Query: 80 SDSMLLWNGVLWDRRVSGPVHRFDQF 3 SDSMLLWNGVLWDRRVSGPVHRFDQF Sbjct: 1596 SDSMLLWNGVLWDRRVSGPVHRFDQF 1621 >ref|XP_003523712.1| PREDICTED: DDB1- and CUL4-associated factor homolog 1-like [Glycine max] Length = 1857 Score = 148 bits (373), Expect = 5e-34 Identities = 72/86 (83%), Positives = 74/86 (86%) Frame = -1 Query: 260 CKAARFSNSGTAFAALSSESAQREILLYDIQRCELISKFSDTSTNFTGRGHVYSLIHFSP 81 CKAARFSNSG FAALSSESA+REI LYDIQ C L S FSDT TGRGHVYSLIHF+P Sbjct: 1525 CKAARFSNSGNVFAALSSESARREIRLYDIQTCHLESNFSDTFAASTGRGHVYSLIHFNP 1584 Query: 80 SDSMLLWNGVLWDRRVSGPVHRFDQF 3 SDSMLLWNGVLWDRR SGPVHRFDQF Sbjct: 1585 SDSMLLWNGVLWDRRDSGPVHRFDQF 1610 >ref|XP_002528006.1| conserved hypothetical protein [Ricinus communis] gi|223532632|gb|EEF34418.1| conserved hypothetical protein [Ricinus communis] Length = 1871 Score = 145 bits (365), Expect = 4e-33 Identities = 67/86 (77%), Positives = 75/86 (87%) Frame = -1 Query: 260 CKAARFSNSGTAFAALSSESAQREILLYDIQRCELISKFSDTSTNFTGRGHVYSLIHFSP 81 CKAARFSNSG FA L+ E A+REILLYD+Q C++ S SDT ++FTGRGHVYSLIHFSP Sbjct: 1534 CKAARFSNSGNVFATLTVEPARREILLYDVQTCQVESTLSDTVSSFTGRGHVYSLIHFSP 1593 Query: 80 SDSMLLWNGVLWDRRVSGPVHRFDQF 3 SD+MLLWNGVLWDRR SGPVHRFDQF Sbjct: 1594 SDTMLLWNGVLWDRRQSGPVHRFDQF 1619 >ref|XP_002280997.2| PREDICTED: DDB1- and CUL4-associated factor homolog 1-like [Vitis vinifera] Length = 2024 Score = 142 bits (358), Expect = 3e-32 Identities = 68/86 (79%), Positives = 75/86 (87%) Frame = -1 Query: 260 CKAARFSNSGTAFAALSSESAQREILLYDIQRCELISKFSDTSTNFTGRGHVYSLIHFSP 81 CKAARFSNSGT FAALSSES++REIL+YDIQ +L K +DTS + GRGHVY LIHFSP Sbjct: 1690 CKAARFSNSGTIFAALSSESSRREILVYDIQTLQLDLKLADTSASSAGRGHVYPLIHFSP 1749 Query: 80 SDSMLLWNGVLWDRRVSGPVHRFDQF 3 SD+MLLWNGVLWDRR SGPVHRFDQF Sbjct: 1750 SDTMLLWNGVLWDRRGSGPVHRFDQF 1775 >ref|XP_002330835.1| predicted protein [Populus trichocarpa] gi|222872637|gb|EEF09768.1| predicted protein [Populus trichocarpa] Length = 1791 Score = 140 bits (354), Expect = 8e-32 Identities = 64/86 (74%), Positives = 74/86 (86%) Frame = -1 Query: 260 CKAARFSNSGTAFAALSSESAQREILLYDIQRCELISKFSDTSTNFTGRGHVYSLIHFSP 81 CKAA FSNSG FAAL++E A+REI+LYD+Q C + S SDT ++ TGRGHVYSL+HFSP Sbjct: 1457 CKAATFSNSGNVFAALTTEQARREIMLYDVQTCHVESTLSDTVSSSTGRGHVYSLVHFSP 1516 Query: 80 SDSMLLWNGVLWDRRVSGPVHRFDQF 3 SD+MLLWNGVLWDRR SGPVHRFDQF Sbjct: 1517 SDTMLLWNGVLWDRRQSGPVHRFDQF 1542