BLASTX nr result

ID: Glycyrrhiza24_contig00008917 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00008917
         (393 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003576041.1| PREDICTED: uncharacterized protein LOC100844...    54   4e-12
ref|XP_002518417.1| conserved hypothetical protein [Ricinus comm...    63   2e-08
gb|ABD32666.1| conserved hypothetical protein [Medicago truncatula]    61   8e-08
ref|XP_003594150.1| Cytochrome b6 [Medicago truncatula] gi|35548...    61   8e-08
tpg|DAA41985.1| TPA: hypothetical protein ZEAMMB73_013184 [Zea m...    61   1e-07

>ref|XP_003576041.1| PREDICTED: uncharacterized protein LOC100844603 [Brachypodium
           distachyon]
          Length = 303

 Score = 54.3 bits (129), Expect(2) = 4e-12
 Identities = 29/50 (58%), Positives = 38/50 (76%), Gaps = 3/50 (6%)
 Frame = -2

Query: 251 ELNINIRPFSRSRFAGNSGTT--RPKSLTQKVNSAPCSRSNS-ADE*GKE 111
           ELNINI PFSRSR AG  G++  +P++  +K++SAPCSRSNS  D  G+E
Sbjct: 136 ELNINIWPFSRSRSAGGGGSSNSKPRAAPRKISSAPCSRSNSRGDTVGRE 185



 Score = 41.6 bits (96), Expect(2) = 4e-12
 Identities = 18/36 (50%), Positives = 24/36 (66%), Gaps = 2/36 (5%)
 Frame = -3

Query: 133 PPMSKARKWPASPRRVG--VHLGRSSPIWQVRRKKP 32
           P +   R+W ASP R G  V +GRSSP+WQ++R  P
Sbjct: 188 PSIQHPRRWAASPGRAGGGVPVGRSSPVWQIKRTAP 223


>ref|XP_002518417.1| conserved hypothetical protein [Ricinus communis]
           gi|223542262|gb|EEF43804.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 358

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 43/83 (51%), Positives = 47/83 (56%), Gaps = 8/83 (9%)
 Frame = -2

Query: 251 ELNINIRPFSRSRFAGNSGT--TRPKSLTQKVNSAPCSRSNSADE*GKEMAR*SASGRGP 78
           ELNINI PFSRSR AGNSG   T     T+KV+SAPCSRSNSA E  K     S+ GR  
Sbjct: 157 ELNINIWPFSRSRSAGNSGARPTMFPGTTRKVSSAPCSRSNSAGE-SKSRKWPSSPGRAH 215

Query: 77  FGKEQP------HLAGSSQKTQN 27
            G+  P         GS  KT N
Sbjct: 216 LGRSSPVWQARRGSGGSRTKTSN 238


>gb|ABD32666.1| conserved hypothetical protein [Medicago truncatula]
          Length = 347

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 35/48 (72%), Positives = 38/48 (79%), Gaps = 5/48 (10%)
 Frame = -2

Query: 251 ELNINIRPFSRSRFAGNSGTTRPK-----SLTQKVNSAPCSRSNSADE 123
           ELNINI PFSRSR AGN+ TTRPK      +T+KVNSAPCSRSNSA E
Sbjct: 159 ELNINIWPFSRSRSAGNT-TTRPKFFTGAPVTRKVNSAPCSRSNSAGE 205



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 29/58 (50%), Positives = 38/58 (65%)
 Frame = -3

Query: 214 GSPVTRVPPDPNR*LKKSTAPPAHGVIPPMSKARKWPASPRRVGVHLGRSSPIWQVRR 41
           G+PVTR         K ++AP +       SK+RKWP+SP R GVH+GR+SP+WQVRR
Sbjct: 185 GAPVTR---------KVNSAPCSRSNSAGESKSRKWPSSPGRAGVHVGRNSPVWQVRR 233


>ref|XP_003594150.1| Cytochrome b6 [Medicago truncatula] gi|355483198|gb|AES64401.1|
           Cytochrome b6 [Medicago truncatula]
          Length = 385

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 35/48 (72%), Positives = 38/48 (79%), Gaps = 5/48 (10%)
 Frame = -2

Query: 251 ELNINIRPFSRSRFAGNSGTTRPK-----SLTQKVNSAPCSRSNSADE 123
           ELNINI PFSRSR AGN+ TTRPK      +T+KVNSAPCSRSNSA E
Sbjct: 159 ELNINIWPFSRSRSAGNT-TTRPKFFTGAPVTRKVNSAPCSRSNSAGE 205



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 29/58 (50%), Positives = 38/58 (65%)
 Frame = -3

Query: 214 GSPVTRVPPDPNR*LKKSTAPPAHGVIPPMSKARKWPASPRRVGVHLGRSSPIWQVRR 41
           G+PVTR         K ++AP +       SK+RKWP+SP R GVH+GR+SP+WQVRR
Sbjct: 185 GAPVTR---------KVNSAPCSRSNSAGESKSRKWPSSPGRAGVHVGRNSPVWQVRR 233


>tpg|DAA41985.1| TPA: hypothetical protein ZEAMMB73_013184 [Zea mays]
          Length = 325

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 37/71 (52%), Positives = 45/71 (63%), Gaps = 7/71 (9%)
 Frame = -2

Query: 251 ELNINIRPFSRSRFAGN-SGTTRPKSLTQKVNSAPCSRSNSADE*GKEMAR*SASGRG-- 81
           ELNINI PFSRSR AG  SG+++P+  T+KV+SAPCSRSNS  E G    R  A+  G  
Sbjct: 152 ELNINIWPFSRSRSAGGGSGSSKPRPPTRKVSSAPCSRSNSRGEAGAPPLRRWAASPGRS 211

Query: 80  ----PFGKEQP 60
               P G+  P
Sbjct: 212 GGGVPVGRSSP 222


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