BLASTX nr result
ID: Glycyrrhiza24_contig00008908
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza24_contig00008908
(1489 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003533366.1| PREDICTED: chloroplastic group IIA intron sp... 754 0.0
ref|XP_003530015.1| PREDICTED: chloroplastic group IIA intron sp... 751 0.0
ref|XP_003620478.1| Chloroplastic group IIA intron splicing faci... 749 0.0
ref|XP_002317913.1| predicted protein [Populus trichocarpa] gi|2... 679 0.0
emb|CBI15459.3| unnamed protein product [Vitis vinifera] 658 0.0
>ref|XP_003533366.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic-like [Glycine max]
Length = 791
Score = 754 bits (1946), Expect = 0.0
Identities = 384/495 (77%), Positives = 422/495 (85%), Gaps = 1/495 (0%)
Frame = +3
Query: 6 DEGL-KKRRVKAPTXXXXXXXXXXXXXXXXXXXXXXXXVSVPKAGLTQEVLEKIHERWRK 182
+EGL KKRRV+AP+ VSVPKAGLT+EV+EKIH+RWRK
Sbjct: 166 EEGLLKKRRVRAPSLADLTLEDELLRRLRREGMRVRERVSVPKAGLTEEVMEKIHKRWRK 225
Query: 183 EELVRLKFHEELAKNMKIAQEIVERRTGGLVTWKSGSVMMVYRGKNYQGPASRKELDVKE 362
EELVRLKFHEELAK+M+ A EIVERRTGGLVTW+SGSVMMVYRG +YQGP SRKEL+ K+
Sbjct: 226 EELVRLKFHEELAKDMRKAHEIVERRTGGLVTWRSGSVMMVYRGIDYQGPDSRKELNEKK 285
Query: 363 GDGFFVPDVSPQSLLRTKDGNATSSLDMSEPVVRSHEQPENMTEEEAEYNALLDGLGPRF 542
GDGFFVPDVS + +D ATS+ + SE VVR E PENM+E EAEYNALLDGLGPRF
Sbjct: 286 GDGFFVPDVS-----KREDSTATSTSEKSEVVVREREHPENMSEAEAEYNALLDGLGPRF 340
Query: 543 VEWWGTGLLPVDADLLPRTVPGYKTPYRLLPTGMRSRLTNAEMTNLRKLAKSLPCHFALG 722
WWGTG+LPVDADLLPRTVPGYKTP+RLLPTGMRSRLTNAEMTNLRKLAKSLPCHFA+G
Sbjct: 341 FGWWGTGILPVDADLLPRTVPGYKTPFRLLPTGMRSRLTNAEMTNLRKLAKSLPCHFAVG 400
Query: 723 RNRNHQGLACAILKLWEKSLVVKIAVKRGIQNTNNKLMXXXXXXXXXXXXXXRNIYYIVI 902
RNRNHQGLACAILKLWEKSLV KIAVKRGIQNTNN+LM RN Y+IVI
Sbjct: 401 RNRNHQGLACAILKLWEKSLVSKIAVKRGIQNTNNELMAEELKMLTGGTLLLRNKYFIVI 460
Query: 903 YRGKDFVPTSVAAVLAERQEMTKQIQDVEEKVRCRAVDATLSGQGEATVPAGSLAEFYEA 1082
YRGKDFVPTSVAAVLAER+E+TKQ+QDVE+KVRCRAVDA SGQGEAT AG+LAEFYEA
Sbjct: 461 YRGKDFVPTSVAAVLAEREELTKQVQDVEDKVRCRAVDAIPSGQGEATAQAGTLAEFYEA 520
Query: 1083 QARWGRDISTEEREKMIEEAAKAKTVKLVKQIEHRLSLAQAKKHRAEKLLAKIESSMVAA 1262
QARWGR+IS +EREKM+EEAAKAKT KLV+QIEH++ +AQ KK RAEKLLAKIE+SMV A
Sbjct: 521 QARWGREISPDEREKMMEEAAKAKTAKLVRQIEHKIFIAQTKKLRAEKLLAKIEASMVPA 580
Query: 1263 GPDYDQETITDEERVMFRRVGLRMKPYLPLGIRGVFDGVIENMHLHWKHRELVKLITKQK 1442
GPDYDQETITDEERVMFR+VGLRMKPYLPLGIRGVFDGV+ENMHLHWKHRELVKL+TKQK
Sbjct: 581 GPDYDQETITDEERVMFRKVGLRMKPYLPLGIRGVFDGVVENMHLHWKHRELVKLMTKQK 640
Query: 1443 TLAFVEDTARLLEYE 1487
TLAFVEDTARLLEYE
Sbjct: 641 TLAFVEDTARLLEYE 655
>ref|XP_003530015.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic-like [Glycine max]
Length = 734
Score = 751 bits (1939), Expect = 0.0
Identities = 383/495 (77%), Positives = 419/495 (84%), Gaps = 1/495 (0%)
Frame = +3
Query: 6 DEGL-KKRRVKAPTXXXXXXXXXXXXXXXXXXXXXXXXVSVPKAGLTQEVLEKIHERWRK 182
+EGL KKRRV+AP+ VSVPKAGLTQEV+EKIH+RWRK
Sbjct: 165 EEGLLKKRRVRAPSLADLTLEDELLRRLRREGMRVRERVSVPKAGLTQEVMEKIHKRWRK 224
Query: 183 EELVRLKFHEELAKNMKIAQEIVERRTGGLVTWKSGSVMMVYRGKNYQGPASRKELDVKE 362
EELVRLKFHEELAK+M+ A EIVERRTGGLVTW+SGSVMMVYRG +YQGP S+KE++ K+
Sbjct: 225 EELVRLKFHEELAKDMRKAHEIVERRTGGLVTWRSGSVMMVYRGIDYQGPDSQKEVNEKK 284
Query: 363 GDGFFVPDVSPQSLLRTKDGNATSSLDMSEPVVRSHEQPENMTEEEAEYNALLDGLGPRF 542
GDGFFVPDVS R ATS+ + SE VVR E PENM+E EAEYNALLDGLGPRF
Sbjct: 285 GDGFFVPDVSK----REDSSTATSTSEKSEVVVREREHPENMSEAEAEYNALLDGLGPRF 340
Query: 543 VEWWGTGLLPVDADLLPRTVPGYKTPYRLLPTGMRSRLTNAEMTNLRKLAKSLPCHFALG 722
V WWGTG+LPVDADLLPRTVPGYKTP+RLLPTGMRSRLTNAEMTNLRKLAKSLPCHFALG
Sbjct: 341 VGWWGTGILPVDADLLPRTVPGYKTPFRLLPTGMRSRLTNAEMTNLRKLAKSLPCHFALG 400
Query: 723 RNRNHQGLACAILKLWEKSLVVKIAVKRGIQNTNNKLMXXXXXXXXXXXXXXRNIYYIVI 902
RNRNHQGLACAILKLWEKSLV KIAVKRGIQNTNN+LM RN Y+IVI
Sbjct: 401 RNRNHQGLACAILKLWEKSLVAKIAVKRGIQNTNNELMAEELKMLTGGTLLLRNKYFIVI 460
Query: 903 YRGKDFVPTSVAAVLAERQEMTKQIQDVEEKVRCRAVDATLSGQGEATVPAGSLAEFYEA 1082
YRGKDFVPTSVAAVLAER+E+TKQ+QDVE+KVRCRAVDA GQGEAT AG+LAEFYEA
Sbjct: 461 YRGKDFVPTSVAAVLAEREELTKQVQDVEDKVRCRAVDAIPLGQGEATAQAGTLAEFYEA 520
Query: 1083 QARWGRDISTEEREKMIEEAAKAKTVKLVKQIEHRLSLAQAKKHRAEKLLAKIESSMVAA 1262
QARWGR+IS EEREKM+EEAAK KT KLV+QIEH++ +AQ KK RAEKLLAKIE+SMV A
Sbjct: 521 QARWGREISPEEREKMVEEAAKTKTAKLVRQIEHKIFIAQTKKLRAEKLLAKIEASMVPA 580
Query: 1263 GPDYDQETITDEERVMFRRVGLRMKPYLPLGIRGVFDGVIENMHLHWKHRELVKLITKQK 1442
GPDYDQETITDEERVMFR+VGLRMKPYLPLGIRGVFDGV+ENMHLHWKHRELVKL+TKQK
Sbjct: 581 GPDYDQETITDEERVMFRKVGLRMKPYLPLGIRGVFDGVVENMHLHWKHRELVKLMTKQK 640
Query: 1443 TLAFVEDTARLLEYE 1487
T+AFVEDTARLLEYE
Sbjct: 641 TVAFVEDTARLLEYE 655
>ref|XP_003620478.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Medicago
truncatula] gi|355495493|gb|AES76696.1| Chloroplastic
group IIA intron splicing facilitator CRS1 [Medicago
truncatula]
Length = 820
Score = 749 bits (1934), Expect = 0.0
Identities = 382/494 (77%), Positives = 415/494 (84%)
Frame = +3
Query: 6 DEGLKKRRVKAPTXXXXXXXXXXXXXXXXXXXXXXXXVSVPKAGLTQEVLEKIHERWRKE 185
+EG KKR +KAP+ VSVPKAGLTQEV+EKIHE WRK+
Sbjct: 195 EEGFKKRTLKAPSLAELTLEDELLRRLRREGMHLRERVSVPKAGLTQEVMEKIHESWRKK 254
Query: 186 ELVRLKFHEELAKNMKIAQEIVERRTGGLVTWKSGSVMMVYRGKNYQGPASRKELDVKEG 365
ELVRLKFHEELAKNM+IA +IVERRTGGLVTW++GSVM+VYRGKNYQGPAS ELDVKEG
Sbjct: 255 ELVRLKFHEELAKNMRIAHQIVERRTGGLVTWRAGSVMIVYRGKNYQGPAS-PELDVKEG 313
Query: 366 DGFFVPDVSPQSLLRTKDGNATSSLDMSEPVVRSHEQPENMTEEEAEYNALLDGLGPRFV 545
DGFFVPDVS SL +TKD NATSSL+ SE V R+ E PE MTEEEAEYNALLD LGPRFV
Sbjct: 314 DGFFVPDVSSGSLSKTKDSNATSSLENSEQVGRNVELPEKMTEEEAEYNALLDDLGPRFV 373
Query: 546 EWWGTGLLPVDADLLPRTVPGYKTPYRLLPTGMRSRLTNAEMTNLRKLAKSLPCHFALGR 725
WWGTG+ PVDADLLPR VPGYKTPYRLLPTGMRSRLT AEMT+LRK+AKSLPCHFALGR
Sbjct: 374 GWWGTGIPPVDADLLPREVPGYKTPYRLLPTGMRSRLTGAEMTDLRKIAKSLPCHFALGR 433
Query: 726 NRNHQGLACAILKLWEKSLVVKIAVKRGIQNTNNKLMXXXXXXXXXXXXXXRNIYYIVIY 905
NRNHQGLACAILKLWE+SL+ KIAVK GIQNTNNKLM RN +YIVIY
Sbjct: 434 NRNHQGLACAILKLWERSLIAKIAVKPGIQNTNNKLMADELSTLTGGTLLLRNRFYIVIY 493
Query: 906 RGKDFVPTSVAAVLAERQEMTKQIQDVEEKVRCRAVDATLSGQGEATVPAGSLAEFYEAQ 1085
RGKDFVPT VAAVLAERQE+TKQ+QDVEEKVRC+AV AT S QGEAT PAGSLAEFYEAQ
Sbjct: 494 RGKDFVPTGVAAVLAERQELTKQVQDVEEKVRCKAVVATPSVQGEATAPAGSLAEFYEAQ 553
Query: 1086 ARWGRDISTEEREKMIEEAAKAKTVKLVKQIEHRLSLAQAKKHRAEKLLAKIESSMVAAG 1265
ARWGRD+S+EE E+MI+EA KAK VKLVKQIEH++SLA K HRAE+LLAKIESSMV G
Sbjct: 554 ARWGRDVSSEEHERMIKEATKAKNVKLVKQIEHKISLAANKLHRAERLLAKIESSMVPVG 613
Query: 1266 PDYDQETITDEERVMFRRVGLRMKPYLPLGIRGVFDGVIENMHLHWKHRELVKLITKQKT 1445
PDYDQETITDEERV+FR++GLRMK YL LGIRGVFDGVIENMHLHWKHRELVKL+TKQK
Sbjct: 614 PDYDQETITDEERVVFRQIGLRMKAYLQLGIRGVFDGVIENMHLHWKHRELVKLVTKQKN 673
Query: 1446 LAFVEDTARLLEYE 1487
AFVEDTARLLEYE
Sbjct: 674 RAFVEDTARLLEYE 687
>ref|XP_002317913.1| predicted protein [Populus trichocarpa] gi|222858586|gb|EEE96133.1|
predicted protein [Populus trichocarpa]
Length = 806
Score = 679 bits (1753), Expect = 0.0
Identities = 350/496 (70%), Positives = 396/496 (79%), Gaps = 1/496 (0%)
Frame = +3
Query: 3 GDEGLKKRRVKAPTXXXXXXXXXXXXXXXXXXXXXXXXVSVPKAGLTQEVLEKIHERWRK 182
G E +KRR KAPT +S+PKAG+T VLE IH+RWRK
Sbjct: 182 GIESGRKRRGKAPTLAELTIEDEELRRLRRMGMFIRERISIPKAGITNAVLENIHDRWRK 241
Query: 183 EELVRLKFHEELAKNMKIAQEIVERRTGGLVTWKSGSVMMVYRGKNYQGPASRKELDVKE 362
EELVRLKFHE LA +MK A EIVERRTGGLV W++GSVM+V+RG NYQGP S+ + +E
Sbjct: 242 EELVRLKFHEVLAHDMKTAHEIVERRTGGLVIWRAGSVMVVFRGTNYQGPPSKLQPADRE 301
Query: 363 GDGFFVPDVSPQSLLRTKDGN-ATSSLDMSEPVVRSHEQPENMTEEEAEYNALLDGLGPR 539
GD FVPDVS + T+ N ATSS + S+ V+R E ENMTEEEAE N+LLD LGPR
Sbjct: 302 GDALFVPDVSSTDSVMTRSSNIATSSSEKSKLVMRITEPTENMTEEEAELNSLLDDLGPR 361
Query: 540 FVEWWGTGLLPVDADLLPRTVPGYKTPYRLLPTGMRSRLTNAEMTNLRKLAKSLPCHFAL 719
F EWWGTGLLPVDADLLP VP YKTP+RLLP GMR+RLTNAEMTN+RKLAK+LPCHFAL
Sbjct: 362 FEEWWGTGLLPVDADLLPPKVPCYKTPFRLLPVGMRARLTNAEMTNMRKLAKALPCHFAL 421
Query: 720 GRNRNHQGLACAILKLWEKSLVVKIAVKRGIQNTNNKLMXXXXXXXXXXXXXXRNIYYIV 899
GRNRNHQGLA AILKLWEKSLV KIAVKRGIQNTNNKLM RN YYIV
Sbjct: 422 GRNRNHQGLAVAILKLWEKSLVAKIAVKRGIQNTNNKLMADELKMLTGGVLLLRNKYYIV 481
Query: 900 IYRGKDFVPTSVAAVLAERQEMTKQIQDVEEKVRCRAVDATLSGQGEATVPAGSLAEFYE 1079
I+RGKDF+P SVAA LAERQE+TKQIQDVEE+VR +V+A SG+ E AG+LAEFYE
Sbjct: 482 IFRGKDFLPQSVAAALAERQEVTKQIQDVEERVRSNSVEAAPSGEDEGKALAGTLAEFYE 541
Query: 1080 AQARWGRDISTEEREKMIEEAAKAKTVKLVKQIEHRLSLAQAKKHRAEKLLAKIESSMVA 1259
AQARWGRDISTEEREKMIEEA+KAKT +LVK+ EH+L++AQAKK RAE LL+KIE++MV
Sbjct: 542 AQARWGRDISTEEREKMIEEASKAKTARLVKRTEHKLAIAQAKKLRAESLLSKIETTMVP 601
Query: 1260 AGPDYDQETITDEERVMFRRVGLRMKPYLPLGIRGVFDGVIENMHLHWKHRELVKLITKQ 1439
+GPD+DQETI++EERVMFRRVGLRMK YLPLGIRGVFDGVIENMHLHWKHRELVKLI+KQ
Sbjct: 602 SGPDFDQETISEEERVMFRRVGLRMKAYLPLGIRGVFDGVIENMHLHWKHRELVKLISKQ 661
Query: 1440 KTLAFVEDTARLLEYE 1487
KTLAFVEDTA+LLEYE
Sbjct: 662 KTLAFVEDTAKLLEYE 677
>emb|CBI15459.3| unnamed protein product [Vitis vinifera]
Length = 830
Score = 658 bits (1698), Expect = 0.0
Identities = 341/497 (68%), Positives = 389/497 (78%), Gaps = 2/497 (0%)
Frame = +3
Query: 3 GDEGLKKRRVKAPTXXXXXXXXXXXXXXXXXXXXXXXXVSVPKAGLTQEVLEKIHERWRK 182
GD LK+R V+APT ++VPKAG+TQ VL KIHE+WRK
Sbjct: 195 GDGRLKRRAVRAPTLAELTIEDEELRRLRRLGMTIRERINVPKAGITQAVLGKIHEKWRK 254
Query: 183 EELVRLKFHEELAKNMKIAQEIVERRTGGLVTWKSGSVMMVYRGKNYQGPASRKELDVKE 362
EELVRLKFHE LA +MK A EIVERRTGGLVTW+SGSVM+V+RG NY+GP + +D E
Sbjct: 255 EELVRLKFHEALAHDMKTAHEIVERRTGGLVTWRSGSVMVVFRGTNYEGPPKPQPVD-GE 313
Query: 363 GDGFFVPDVSP-QSLLRTKDGNATSSLDMSEPVVRSHEQPENMTEEEAEYNALLDGLGPR 539
GD FVPDVS + D N +L+ VR+ ENMTEEEAEYN+LLDGLGPR
Sbjct: 314 GDSLFVPDVSSVDNPAMRNDNNGGPTLEKGSLPVRNPVHAENMTEEEAEYNSLLDGLGPR 373
Query: 540 FVEWWGTGLLPVDADLLPRTVPGYKTPYRLLPTGMRSRLTNAEMTNLRKLAKSLPCHFAL 719
FV+WWGTG+LPVD DLLP+++PGYKTP R+LPTGMR RLTNAEMTNLRKLAKSLPCHFAL
Sbjct: 374 FVDWWGTGVLPVDGDLLPQSIPGYKTPLRILPTGMRPRLTNAEMTNLRKLAKSLPCHFAL 433
Query: 720 GRNRNHQGLACAILKLWEKSLVVKIAVKRGIQNTNNKLMXXXXXXXXXXXXXXRNIYYIV 899
GRNRNHQGLA AI+KLWEKS+VVKIAVK GIQNTNNKLM RN YYIV
Sbjct: 434 GRNRNHQGLAAAIIKLWEKSIVVKIAVKPGIQNTNNKLMAEEIKNLTGGVLLLRNKYYIV 493
Query: 900 IYRGKDFVPTSVAAVLAERQEMTKQIQDVEEKVRCRAVDATLSGQGEATVP-AGSLAEFY 1076
IYRGKDF+PTSVAA L+ER+E+TK IQ VEEKVR +A SG+ P AG+LAEFY
Sbjct: 494 IYRGKDFLPTSVAAALSEREELTKHIQVVEEKVRTGGAEAIPSGEDGVGQPLAGTLAEFY 553
Query: 1077 EAQARWGRDISTEEREKMIEEAAKAKTVKLVKQIEHRLSLAQAKKHRAEKLLAKIESSMV 1256
EAQARWGR+IS EE EKMIEEA++AK+ ++VK+IEH+L+LAQAKK RAE+LLAKIE+SM+
Sbjct: 554 EAQARWGREISAEEHEKMIEEASRAKSARVVKRIEHKLALAQAKKLRAERLLAKIEASMI 613
Query: 1257 AAGPDYDQETITDEERVMFRRVGLRMKPYLPLGIRGVFDGVIENMHLHWKHRELVKLITK 1436
AGP DQETITDEER MFRR+GLRMK YL LG+RGVFDGVIENMHLHWKHRELVKLI+K
Sbjct: 614 PAGPSDDQETITDEERFMFRRLGLRMKAYLLLGVRGVFDGVIENMHLHWKHRELVKLISK 673
Query: 1437 QKTLAFVEDTARLLEYE 1487
QKTLAFVEDTARLLEYE
Sbjct: 674 QKTLAFVEDTARLLEYE 690