BLASTX nr result

ID: Glycyrrhiza24_contig00008884 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00008884
         (1502 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003526921.1| PREDICTED: U5 small nuclear ribonucleoprotei...   723   0.0  
ref|XP_003522451.1| PREDICTED: uncharacterized protein LOC100798...   715   0.0  
ref|XP_003602749.1| WD repeat-containing protein, putative [Medi...   653   0.0  
ref|XP_002318173.1| predicted protein [Populus trichocarpa] gi|2...   637   e-180
gb|ABK95770.1| unknown [Populus trichocarpa]                          637   e-180

>ref|XP_003526921.1| PREDICTED: U5 small nuclear ribonucleoprotein 40 kDa protein-like
            [Glycine max]
          Length = 533

 Score =  723 bits (1865), Expect = 0.0
 Identities = 362/409 (88%), Positives = 378/409 (92%), Gaps = 8/409 (1%)
 Frame = +1

Query: 1    NKASMSSNSEATP-----PVTGG---GKSDKSHSHNRLSSEQQNVESNKDKGTKRKFEQK 156
            +KAS++S+SEATP     P+TGG   GKSDKSHS NRLSSEQQ  E  K+KGTKRKFEQK
Sbjct: 127  SKASITSSSEATPGVHSSPITGGSSRGKSDKSHS-NRLSSEQQKTEV-KEKGTKRKFEQK 184

Query: 157  EHKELIPLIRKSSSPSLVHCQTSNHISSQHKRKLRSIALCPVNDQLFVTSALDGVVNLWQ 336
            EHKELIPLIRKSSSPSLV CQTSNHISSQHKRKLRSIALCPVNDQLFVTSALDGVVN WQ
Sbjct: 185  EHKELIPLIRKSSSPSLVTCQTSNHISSQHKRKLRSIALCPVNDQLFVTSALDGVVNFWQ 244

Query: 337  VQARGSGASLLSTTDCVSPKQRRWPEDVAWHPEGNSLFSVYSADGGDSQISITNLNKKQG 516
            VQA+G+GAS LSTTDC S KQRRWPED+AWHPEGNSLFSVYSADGGDSQ+SITNLNK  G
Sbjct: 245  VQAKGAGASRLSTTDCASQKQRRWPEDLAWHPEGNSLFSVYSADGGDSQVSITNLNKGPG 304

Query: 517  GDRVKFLEDKPHVKGIINGIVFMPWENTCFVTGGSDHGVILWSEKDGENKWKPKALHRNL 696
            G+RVKFLEDKPHVKGIINGIVFMPWENTCFVTGGSDH VILWSE+D E KWKPKALHRNL
Sbjct: 305  GERVKFLEDKPHVKGIINGIVFMPWENTCFVTGGSDHAVILWSEQDDE-KWKPKALHRNL 363

Query: 697  HSSAVMGVAGMQHKQIVLSAGADRRIYGYDVGVGRADFKHQIDSKCMSVLPNPCDFNLFM 876
            HSSAVMGVAGMQHKQ+VLS GADRRI+GYDV  GRADFKHQ+DSKCMSVLPNP DFNLFM
Sbjct: 364  HSSAVMGVAGMQHKQMVLSVGADRRIFGYDVRAGRADFKHQVDSKCMSVLPNPSDFNLFM 423

Query: 877  VQTGTHEKQLRLFDIRLRQTELHAFGWKQESSDSQSALINQAWSPDGLYITSGSVDPVIH 1056
            VQTGTHE+QLRLFDIRLR TELHAFGWKQESSDSQSALINQAWSPDGLYITSGS DPVIH
Sbjct: 424  VQTGTHERQLRLFDIRLRNTELHAFGWKQESSDSQSALINQAWSPDGLYITSGSADPVIH 483

Query: 1057 IFDIRYNAHKPSQSIRAHQKRVFRAMWLQSIPLVISISSDLNIGLHKVY 1203
            IFDIRY AHKPSQSIR HQKRVFRAMWLQSIPLVISISSDLNIGLHKVY
Sbjct: 484  IFDIRYTAHKPSQSIRVHQKRVFRAMWLQSIPLVISISSDLNIGLHKVY 532


>ref|XP_003522451.1| PREDICTED: uncharacterized protein LOC100798141 [Glycine max]
          Length = 1494

 Score =  715 bits (1845), Expect = 0.0
 Identities = 359/409 (87%), Positives = 377/409 (92%), Gaps = 8/409 (1%)
 Frame = +1

Query: 1    NKASMSSNSEATP-----PVTGG---GKSDKSHSHNRLSSEQQNVESNKDKGTKRKFEQK 156
            +KAS++S+SEATP     P+TGG   GKSDKS S NRLSSEQQ  E  K+KGTKRKFEQK
Sbjct: 127  SKASITSSSEATPGVHNSPITGGSSRGKSDKSQS-NRLSSEQQKTEV-KEKGTKRKFEQK 184

Query: 157  EHKELIPLIRKSSSPSLVHCQTSNHISSQHKRKLRSIALCPVNDQLFVTSALDGVVNLWQ 336
             HKELIPL+RKSSSPSLV CQTSNHISSQHKRKLRSIALCPVNDQLFVTSALDGVVN WQ
Sbjct: 185  GHKELIPLVRKSSSPSLVTCQTSNHISSQHKRKLRSIALCPVNDQLFVTSALDGVVNFWQ 244

Query: 337  VQARGSGASLLSTTDCVSPKQRRWPEDVAWHPEGNSLFSVYSADGGDSQISITNLNKKQG 516
            VQA+G+GAS LSTTDC S KQRRWPED+AWHPEGNSLFSVYSADGGDSQ+SITNLNK QG
Sbjct: 245  VQAKGAGASRLSTTDCASQKQRRWPEDLAWHPEGNSLFSVYSADGGDSQVSITNLNKGQG 304

Query: 517  GDRVKFLEDKPHVKGIINGIVFMPWENTCFVTGGSDHGVILWSEKDGENKWKPKALHRNL 696
            G+RVKFLEDKPHVKGIINGIVFMPWENTCFVTGGSDH VILW+E+D E KWKPKALHRNL
Sbjct: 305  GERVKFLEDKPHVKGIINGIVFMPWENTCFVTGGSDHAVILWNEQDDE-KWKPKALHRNL 363

Query: 697  HSSAVMGVAGMQHKQIVLSAGADRRIYGYDVGVGRADFKHQIDSKCMSVLPNPCDFNLFM 876
            HSSAVMGVAGMQ KQ+VLS GADRRI+GYDV VGRADFKHQ+DSKCMSVLPNP DFNLFM
Sbjct: 364  HSSAVMGVAGMQQKQMVLSVGADRRIFGYDVRVGRADFKHQVDSKCMSVLPNPSDFNLFM 423

Query: 877  VQTGTHEKQLRLFDIRLRQTELHAFGWKQESSDSQSALINQAWSPDGLYITSGSVDPVIH 1056
            VQTGTHE+QLRLFDIRLR TELHAFGWKQESSDSQSALINQAWSPDG YITSGS DPVIH
Sbjct: 424  VQTGTHERQLRLFDIRLRNTELHAFGWKQESSDSQSALINQAWSPDGHYITSGSADPVIH 483

Query: 1057 IFDIRYNAHKPSQSIRAHQKRVFRAMWLQSIPLVISISSDLNIGLHKVY 1203
            IFDIRY AHKPSQSIRAHQKRVFRAMWLQSIPLVISISSDLNIGLHKVY
Sbjct: 484  IFDIRYTAHKPSQSIRAHQKRVFRAMWLQSIPLVISISSDLNIGLHKVY 532


>ref|XP_003602749.1| WD repeat-containing protein, putative [Medicago truncatula]
            gi|355491797|gb|AES73000.1| WD repeat-containing protein,
            putative [Medicago truncatula]
          Length = 517

 Score =  653 bits (1684), Expect = 0.0
 Identities = 317/381 (83%), Positives = 347/381 (91%)
 Frame = +1

Query: 52   GGKSDKSHSHNRLSSEQQNVESNKDKGTKRKFEQKEHKELIPLIRKSSSPSLVHCQTSNH 231
            GGKS KS        +QQNVE  KDKGTKRKFEQKEH+ELIPLIRKSSS +LVHCQ+SNH
Sbjct: 140  GGKSVKS------KIDQQNVEG-KDKGTKRKFEQKEHQELIPLIRKSSSKNLVHCQSSNH 192

Query: 232  ISSQHKRKLRSIALCPVNDQLFVTSALDGVVNLWQVQARGSGASLLSTTDCVSPKQRRWP 411
            ISSQHKRKLRSIALCP NDQLF TSALDG+VN W+VQA+GS ASLL++TDC S KQRRWP
Sbjct: 193  ISSQHKRKLRSIALCPANDQLFATSALDGLVNFWKVQAKGSSASLLNSTDCASQKQRRWP 252

Query: 412  EDVAWHPEGNSLFSVYSADGGDSQISITNLNKKQGGDRVKFLEDKPHVKGIINGIVFMPW 591
            ED+AWHPEGN LFSVY+ADGGDSQIS+TN NK +G +RV FLEDKPHVKGIINGIVFMPW
Sbjct: 253  EDIAWHPEGNRLFSVYTADGGDSQISVTNWNKIKGVERVTFLEDKPHVKGIINGIVFMPW 312

Query: 592  ENTCFVTGGSDHGVILWSEKDGENKWKPKALHRNLHSSAVMGVAGMQHKQIVLSAGADRR 771
            E+TCFVTGGSDH V+LW E+D E+KWKP+ LHRNLHSSAVMGVAGMQ KQIVLSAGADRR
Sbjct: 313  EDTCFVTGGSDHAVVLWREQDDEDKWKPRPLHRNLHSSAVMGVAGMQQKQIVLSAGADRR 372

Query: 772  IYGYDVGVGRADFKHQIDSKCMSVLPNPCDFNLFMVQTGTHEKQLRLFDIRLRQTELHAF 951
            I+G+DVG GRA+F HQIDSKCMSV+PNP DFNLFMVQTGTHEKQLRLFDIRLR+TELHAF
Sbjct: 373  IFGFDVGAGRAEFTHQIDSKCMSVVPNPVDFNLFMVQTGTHEKQLRLFDIRLRRTELHAF 432

Query: 952  GWKQESSDSQSALINQAWSPDGLYITSGSVDPVIHIFDIRYNAHKPSQSIRAHQKRVFRA 1131
            GWKQESS+SQSALINQAWSPDGLYITSGS DPVIHIFDIRYN ++PSQSI+AHQKRVF A
Sbjct: 433  GWKQESSESQSALINQAWSPDGLYITSGSADPVIHIFDIRYNLNRPSQSIKAHQKRVFGA 492

Query: 1132 MWLQSIPLVISISSDLNIGLH 1194
            +WLQSIPL+ISISSDLNIGLH
Sbjct: 493  LWLQSIPLLISISSDLNIGLH 513


>ref|XP_002318173.1| predicted protein [Populus trichocarpa] gi|222858846|gb|EEE96393.1|
            predicted protein [Populus trichocarpa]
          Length = 493

 Score =  637 bits (1643), Expect = e-180
 Identities = 306/381 (80%), Positives = 344/381 (90%)
 Frame = +1

Query: 58   KSDKSHSHNRLSSEQQNVESNKDKGTKRKFEQKEHKELIPLIRKSSSPSLVHCQTSNHIS 237
            K +K H   R SS+ + VE  +D+G KRK EQKEHKELIPL+ +SS+P  VHC TSNHIS
Sbjct: 117  KMEKCH---RSSSDVEVVEI-QDRGNKRKIEQKEHKELIPLVSRSSAPCTVHCHTSNHIS 172

Query: 238  SQHKRKLRSIALCPVNDQLFVTSALDGVVNLWQVQARGSGASLLSTTDCVSPKQRRWPED 417
            SQHKRKLRS+A+CPVNDQLFV+SALDG++NLWQ+QARGSGASLLSTTD VSP QRRWPED
Sbjct: 173  SQHKRKLRSVAVCPVNDQLFVSSALDGMINLWQLQARGSGASLLSTTDSVSPVQRRWPED 232

Query: 418  VAWHPEGNSLFSVYSADGGDSQISITNLNKKQGGDRVKFLEDKPHVKGIINGIVFMPWEN 597
            +AWHP GNSLFS Y+AD GD+QIS+ NLNK QG  RV FLEDKPH+KGIINGI FMPWEN
Sbjct: 233  IAWHPLGNSLFSAYTADSGDAQISVLNLNKTQGRARVTFLEDKPHIKGIINGIEFMPWEN 292

Query: 598  TCFVTGGSDHGVILWSEKDGENKWKPKALHRNLHSSAVMGVAGMQHKQIVLSAGADRRIY 777
            TCFVTGGSDHGV+LW+EKD EN WKPKALHRN+HSSAVMGVAGMQ KQIVLSAGAD+RI 
Sbjct: 293  TCFVTGGSDHGVVLWNEKDEENSWKPKALHRNMHSSAVMGVAGMQQKQIVLSAGADKRIV 352

Query: 778  GYDVGVGRADFKHQIDSKCMSVLPNPCDFNLFMVQTGTHEKQLRLFDIRLRQTELHAFGW 957
            G+DV VGRADFKHQ+DS+CMSVLPNPCDFNLFMVQTGT  KQLRLFDIRLRQTE+H+FG+
Sbjct: 353  GFDVQVGRADFKHQLDSRCMSVLPNPCDFNLFMVQTGTLGKQLRLFDIRLRQTEIHSFGF 412

Query: 958  KQESSDSQSALINQAWSPDGLYITSGSVDPVIHIFDIRYNAHKPSQSIRAHQKRVFRAMW 1137
            KQESSDSQSALINQAWSPDGLY+TSGSVDPVIH+FDIRYN HKPSQSI+AHQKRVF+A+W
Sbjct: 413  KQESSDSQSALINQAWSPDGLYLTSGSVDPVIHVFDIRYNYHKPSQSIKAHQKRVFKAVW 472

Query: 1138 LQSIPLVISISSDLNIGLHKV 1200
              S+PL+ISISSDL+IGLHK+
Sbjct: 473  HYSLPLLISISSDLHIGLHKI 493


>gb|ABK95770.1| unknown [Populus trichocarpa]
          Length = 468

 Score =  637 bits (1643), Expect = e-180
 Identities = 306/381 (80%), Positives = 344/381 (90%)
 Frame = +1

Query: 58   KSDKSHSHNRLSSEQQNVESNKDKGTKRKFEQKEHKELIPLIRKSSSPSLVHCQTSNHIS 237
            K +K H   R SS+ + VE  +D+G KRK EQKEHKELIPL+ +SS+P  VHC TSNHIS
Sbjct: 91   KMEKCH---RSSSDVEVVEI-QDRGNKRKIEQKEHKELIPLVSRSSAPCTVHCHTSNHIS 146

Query: 238  SQHKRKLRSIALCPVNDQLFVTSALDGVVNLWQVQARGSGASLLSTTDCVSPKQRRWPED 417
            SQHKRKLRS+A+CPVNDQLFV+SALDG++NLWQ+QARGSGASLLSTTD VSP QRRWPED
Sbjct: 147  SQHKRKLRSVAVCPVNDQLFVSSALDGMINLWQLQARGSGASLLSTTDSVSPVQRRWPED 206

Query: 418  VAWHPEGNSLFSVYSADGGDSQISITNLNKKQGGDRVKFLEDKPHVKGIINGIVFMPWEN 597
            +AWHP GNSLFS Y+AD GD+QIS+ NLNK QG  RV FLEDKPH+KGIINGI FMPWEN
Sbjct: 207  IAWHPLGNSLFSAYTADSGDAQISVLNLNKTQGRARVTFLEDKPHIKGIINGIEFMPWEN 266

Query: 598  TCFVTGGSDHGVILWSEKDGENKWKPKALHRNLHSSAVMGVAGMQHKQIVLSAGADRRIY 777
            TCFVTGGSDHGV+LW+EKD EN WKPKALHRN+HSSAVMGVAGMQ KQIVLSAGAD+RI 
Sbjct: 267  TCFVTGGSDHGVVLWNEKDEENSWKPKALHRNMHSSAVMGVAGMQQKQIVLSAGADKRIV 326

Query: 778  GYDVGVGRADFKHQIDSKCMSVLPNPCDFNLFMVQTGTHEKQLRLFDIRLRQTELHAFGW 957
            G+DV VGRADFKHQ+DS+CMSVLPNPCDFNLFMVQTGT  KQLRLFDIRLRQTE+H+FG+
Sbjct: 327  GFDVQVGRADFKHQLDSRCMSVLPNPCDFNLFMVQTGTLGKQLRLFDIRLRQTEIHSFGF 386

Query: 958  KQESSDSQSALINQAWSPDGLYITSGSVDPVIHIFDIRYNAHKPSQSIRAHQKRVFRAMW 1137
            KQESSDSQSALINQAWSPDGLY+TSGSVDPVIH+FDIRYN HKPSQSI+AHQKRVF+A+W
Sbjct: 387  KQESSDSQSALINQAWSPDGLYLTSGSVDPVIHVFDIRYNYHKPSQSIKAHQKRVFKAVW 446

Query: 1138 LQSIPLVISISSDLNIGLHKV 1200
              S+PL+ISISSDL+IGLHK+
Sbjct: 447  HYSLPLLISISSDLHIGLHKI 467


Top