BLASTX nr result

ID: Glycyrrhiza24_contig00008859 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00008859
         (328 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003539729.1| PREDICTED: fasciclin-like arabinogalactan pr...    65   7e-09
ref|XP_003539726.1| PREDICTED: fasciclin-like arabinogalactan pr...    65   7e-09
ref|XP_003539722.1| PREDICTED: fasciclin-like arabinogalactan pr...    65   7e-09
ref|XP_003539213.1| PREDICTED: fasciclin-like arabinogalactan pr...    62   4e-08
gb|AFK42266.1| unknown [Lotus japonicus]                               60   6e-08

>ref|XP_003539729.1| PREDICTED: fasciclin-like arabinogalactan protein 11-like isoform 2
           [Glycine max]
          Length = 293

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 33/55 (60%), Positives = 43/55 (78%), Gaps = 2/55 (3%)
 Frame = -1

Query: 328 ETAKAPKPDKDTASSSDSSQVVNPTEENSAS--VTVYGMWVSLGFATLVAALVKT 170
           +TAKAPK DKD +SSSDSSQ VNPTE+NS +  + VYGMW+SLG   L+ +++ T
Sbjct: 240 DTAKAPKADKDESSSSDSSQ-VNPTEQNSGTEKIAVYGMWMSLGLGALLMSVMTT 293


>ref|XP_003539726.1| PREDICTED: fasciclin-like arabinogalactan protein 11-like [Glycine
           max]
          Length = 305

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 33/55 (60%), Positives = 43/55 (78%), Gaps = 2/55 (3%)
 Frame = -1

Query: 328 ETAKAPKPDKDTASSSDSSQVVNPTEENSAS--VTVYGMWVSLGFATLVAALVKT 170
           +TAKAPK DKD +SSSDSSQ VNPTE+NS +  + VYGMW+SLG   L+ +++ T
Sbjct: 252 DTAKAPKADKDESSSSDSSQ-VNPTEQNSGTEKIAVYGMWMSLGLGVLLMSVMTT 305


>ref|XP_003539722.1| PREDICTED: fasciclin-like arabinogalactan protein 12-like [Glycine
           max]
          Length = 293

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 33/55 (60%), Positives = 43/55 (78%), Gaps = 2/55 (3%)
 Frame = -1

Query: 328 ETAKAPKPDKDTASSSDSSQVVNPTEENSAS--VTVYGMWVSLGFATLVAALVKT 170
           +TAKAPK DKD +SSSDSSQ VNPTE+NS +  + VYGMW+SLG   L+ +++ T
Sbjct: 240 DTAKAPKADKDESSSSDSSQ-VNPTEQNSGTEKIAVYGMWMSLGLGVLLMSVMTT 293


>ref|XP_003539213.1| PREDICTED: fasciclin-like arabinogalactan protein 11-like [Glycine
           max]
          Length = 292

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 32/52 (61%), Positives = 41/52 (78%), Gaps = 2/52 (3%)
 Frame = -1

Query: 328 ETAKAPKPDKDTASSSDSSQVVNPTEENSAS--VTVYGMWVSLGFATLVAAL 179
           + AKAPK DKD +SSSDSS+ VNPTE+NS +  ++VYGMWVSLG A +  A+
Sbjct: 240 DAAKAPKADKDRSSSSDSSR-VNPTEQNSGAKKISVYGMWVSLGLALVATAM 290


>gb|AFK42266.1| unknown [Lotus japonicus]
          Length = 106

 Score = 60.1 bits (144), Expect(2) = 6e-08
 Identities = 37/63 (58%), Positives = 40/63 (63%), Gaps = 2/63 (3%)
 Frame = +3

Query: 141 RANPPASPFQVFTNAATKVANPSDTHIPYTVTEA--EFSSVGLTTCDESEDDAVSLSGLG 314
           RAN      QV   AA   ANPSD H  YT+  A  EFS+V LT  + SEDDAVSLSGLG
Sbjct: 12  RANQLVGLHQVRIIAAINAANPSDIHFAYTLIIAAPEFSAVVLTCDESSEDDAVSLSGLG 71

Query: 315 AFA 323
           AFA
Sbjct: 72  AFA 74



 Score = 21.6 bits (44), Expect(2) = 6e-08
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = +1

Query: 112 MRVQKKEIHSGR 147
           M V KKEIH+GR
Sbjct: 1   MLVLKKEIHNGR 12


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