BLASTX nr result
ID: Glycyrrhiza24_contig00008850
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza24_contig00008850
(1935 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003519139.1| PREDICTED: tRNA pseudouridine synthase A, mi... 849 0.0
ref|XP_003610360.1| tRNA pseudouridine synthase [Medicago trunca... 834 0.0
ref|XP_003610356.1| tRNA pseudouridine synthase [Medicago trunca... 833 0.0
gb|ACJ85562.1| unknown [Medicago truncatula] gi|388491044|gb|AFK... 832 0.0
gb|ADN34131.1| tRNA pseudouridine synthase family protein [Cucum... 691 0.0
>ref|XP_003519139.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like [Glycine
max]
Length = 548
Score = 849 bits (2194), Expect = 0.0
Identities = 430/527 (81%), Positives = 465/527 (88%), Gaps = 3/527 (0%)
Frame = -3
Query: 1759 MENSDIRTTXXXXXXXPQVAAEEPETKKLKMSTTTSDDEECATATGTKIRYKRRKIAIFF 1580
MENSD T P V+AEEPE KKLKMSTTTSDDEE TGTK RYKRRK+AIFF
Sbjct: 1 MENSDTTLTSSSLPPPPPVSAEEPEPKKLKMSTTTSDDEE----TGTKKRYKRRKVAIFF 56
Query: 1579 AYCGVGYQGMQKNPGAKTIEGDLEEALYASGAVPEQDRGNPKRYDWARSARTDKGVSAVG 1400
AYCGVGYQGMQKNPGAKTIEGDLEEALY SGAVPEQDRG PKRYDWARSARTDKGVSAVG
Sbjct: 57 AYCGVGYQGMQKNPGAKTIEGDLEEALYVSGAVPEQDRGVPKRYDWARSARTDKGVSAVG 116
Query: 1399 QVVSGRFYIDPPGLVDRLNSNLPLQIRIFGYKRATASFNAKKFCDRRRYVYLIPVFALDP 1220
QVVSGRFYIDPPGLVDRLNSNLP QIRIFGYKR TASFNAKKFCDRRRYVYLIPVFALDP
Sbjct: 117 QVVSGRFYIDPPGLVDRLNSNLPSQIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFALDP 176
Query: 1219 CCHRDRETVLASLGSENELVKCLECSERGRKVVGLVGNGRRNLELEAADVVAGISSNQND 1040
CHRDRETV+ASLGS NELVKCLECSERGRKVVGLVGN ++NLELEA DV AGISSN++
Sbjct: 177 SCHRDRETVMASLGSGNELVKCLECSERGRKVVGLVGNRKQNLELEAVDVEAGISSNRDS 236
Query: 1039 ---VDVEGSLSKGDYNHLNEESSNDNEGKVSVDDIKTGLETIVSCQDDSTPLNGGSVNNS 869
DVE SLSKGD NHLNEES NDN+G + + KTGLET++ Q++ TPLNG SVNNS
Sbjct: 237 GVTEDVEVSLSKGDDNHLNEESGNDNKGGM---NCKTGLETVIPVQEEGTPLNGESVNNS 293
Query: 868 GILEEEKLNGEDKPTEGSEFCYGEKERERFNKILKYYVGTHNFHNFTTRTKAEDPAARRF 689
ILEEEK+NGEDKPT GS FCYGEKERERFNKILK +VGTHNFHNFTTRTKAEDPAARR+
Sbjct: 294 DILEEEKVNGEDKPTNGSRFCYGEKERERFNKILKCFVGTHNFHNFTTRTKAEDPAARRY 353
Query: 688 IISFDANTTLVVEGMEFVKCEVVGQSFMLHQIRKMIGLAVAIMRNCAPESLIAKALQKDV 509
IISF+ANTTLVVEG+EFVKCEVVGQSFMLHQIRKMIGLAVAIMRNCAPESLI +ALQ+DV
Sbjct: 354 IISFNANTTLVVEGVEFVKCEVVGQSFMLHQIRKMIGLAVAIMRNCAPESLIDEALQQDV 413
Query: 508 SINVPTAPEVGLYLDECFFSSYNQKWKDSHEELSMKAYEKEAEDFKIKYIYSHIASTEQK 329
+INVPTAPEVGLYLDECFF+SYNQKWKD HEELSMKAYEKEA++FK+KYIYSHIASTEQK
Sbjct: 414 NINVPTAPEVGLYLDECFFTSYNQKWKD-HEELSMKAYEKEADEFKMKYIYSHIASTEQK 472
Query: 328 DGTVALWLHSLNHRNYPDLRIVDEEGVINDKISETDLTCRDRVNGFP 188
+GTVALWLHSLNHRNYPDLR+++EE + N+K ++ D + P
Sbjct: 473 EGTVALWLHSLNHRNYPDLRVINEEAIPNNKSADPKEAITDNKSADP 519
>ref|XP_003610360.1| tRNA pseudouridine synthase [Medicago truncatula]
gi|355511415|gb|AES92557.1| tRNA pseudouridine synthase
[Medicago truncatula] gi|388510220|gb|AFK43176.1| unknown
[Medicago truncatula]
Length = 530
Score = 834 bits (2155), Expect = 0.0
Identities = 418/521 (80%), Positives = 453/521 (86%), Gaps = 7/521 (1%)
Frame = -3
Query: 1759 MENSDIRTTXXXXXXXPQVAAEEPETKKLKMSTTTSDDEECATATGTKIRYKRRKIAIFF 1580
MENSD + P AEEP TKK+KMSTTTSDDE C TA G+K+RYKRRK+AIFF
Sbjct: 1 MENSDKTPSISSSPALPSAVAEEPATKKVKMSTTTSDDEGCTTAEGSKVRYKRRKVAIFF 60
Query: 1579 AYCGVGYQGMQKNPGAKTIEGDLEEALYASGAVPEQDRGNPKRYDWARSARTDKGVSAVG 1400
AYCGVGYQGMQKNPGAKTIEG+LEEALY SGAVPEQDRG KRYDWARSARTDKGVSAVG
Sbjct: 61 AYCGVGYQGMQKNPGAKTIEGELEEALYVSGAVPEQDRGLSKRYDWARSARTDKGVSAVG 120
Query: 1399 QVVSGRFYIDPPGLVDRLNSNLPLQIRIFGYKRATASFNAKKFCDRRRYVYLIPVFALDP 1220
QVVSGRFYIDPPG VDRLNSNLP QIRIFG+KR TASF+AKKFCDRRRYVYLIPVFALDP
Sbjct: 121 QVVSGRFYIDPPGFVDRLNSNLPSQIRIFGFKRVTASFSAKKFCDRRRYVYLIPVFALDP 180
Query: 1219 CCHRDRETVLASLGSENELVKCLECSERGRKVVGLVGNGRRNLELEAADVVAGISSNQND 1040
CCHRDRETVLASLGSENELVKCL CSERGRKV G+VGN +RNLELEA DV G SSN+ND
Sbjct: 181 CCHRDRETVLASLGSENELVKCLPCSERGRKVEGVVGNSKRNLELEAVDVENG-SSNKND 239
Query: 1039 V-------DVEGSLSKGDYNHLNEESSNDNEGKVSVDDIKTGLETIVSCQDDSTPLNGGS 881
V DVE SLSKGD NHLN+ES NDNEGKVSV+++ + +T+VS QD+ P+NGGS
Sbjct: 240 VVDSGVTKDVEVSLSKGDDNHLNKESINDNEGKVSVEEVNS--KTVVSDQDEVAPINGGS 297
Query: 880 VNNSGILEEEKLNGEDKPTEGSEFCYGEKERERFNKILKYYVGTHNFHNFTTRTKAEDPA 701
NN GILEEEK+N ED GS FCYGEKERERFN ILK YVGTHNFHNFTTR K EDP+
Sbjct: 298 ENNLGILEEEKVNREDTAANGSGFCYGEKERERFNNILKCYVGTHNFHNFTTRIKPEDPS 357
Query: 700 ARRFIISFDANTTLVVEGMEFVKCEVVGQSFMLHQIRKMIGLAVAIMRNCAPESLIAKAL 521
A+RFIISFDA+TT+VVEGMEFVKCE+VGQSFMLHQIRKM+GLAVAIMRNCAPESLI KAL
Sbjct: 358 AKRFIISFDASTTVVVEGMEFVKCEIVGQSFMLHQIRKMMGLAVAIMRNCAPESLIEKAL 417
Query: 520 QKDVSINVPTAPEVGLYLDECFFSSYNQKWKDSHEELSMKAYEKEAEDFKIKYIYSHIAS 341
QKDVSI VPTAPEVGLYLDECFF+SYNQKWKD+HEE+SMKAYEKEAEDFK++YIY HIAS
Sbjct: 418 QKDVSITVPTAPEVGLYLDECFFTSYNQKWKDTHEEVSMKAYEKEAEDFKMQYIYPHIAS 477
Query: 340 TEQKDGTVALWLHSLNHRNYPDLRIVDEEGVINDKISETDL 218
TE K+GTV LWLHSLNHRNYPDLRI+D EGV NDK E D+
Sbjct: 478 TEYKEGTVGLWLHSLNHRNYPDLRILDGEGVTNDKKVEVDM 518
>ref|XP_003610356.1| tRNA pseudouridine synthase [Medicago truncatula]
gi|355511411|gb|AES92553.1| tRNA pseudouridine synthase
[Medicago truncatula]
Length = 530
Score = 833 bits (2152), Expect = 0.0
Identities = 417/521 (80%), Positives = 453/521 (86%), Gaps = 7/521 (1%)
Frame = -3
Query: 1759 MENSDIRTTXXXXXXXPQVAAEEPETKKLKMSTTTSDDEECATATGTKIRYKRRKIAIFF 1580
MENSD + P AEEP TKK+KMSTTTSDDE C TA G+K+RYKRRK+AIFF
Sbjct: 1 MENSDKTPSISSSPALPSAVAEEPATKKVKMSTTTSDDEGCTTAEGSKVRYKRRKVAIFF 60
Query: 1579 AYCGVGYQGMQKNPGAKTIEGDLEEALYASGAVPEQDRGNPKRYDWARSARTDKGVSAVG 1400
AYCGVGYQGMQKNPGAKTIEG+LEEALY SGAVPEQDRG KRYDWARSARTDKGVSAVG
Sbjct: 61 AYCGVGYQGMQKNPGAKTIEGELEEALYVSGAVPEQDRGLSKRYDWARSARTDKGVSAVG 120
Query: 1399 QVVSGRFYIDPPGLVDRLNSNLPLQIRIFGYKRATASFNAKKFCDRRRYVYLIPVFALDP 1220
QVVSGRFYIDPPG VDRLNSNLP QIRIFG+KR TASF+AKKFCDRRRYVYLIPVFALDP
Sbjct: 121 QVVSGRFYIDPPGFVDRLNSNLPSQIRIFGFKRVTASFSAKKFCDRRRYVYLIPVFALDP 180
Query: 1219 CCHRDRETVLASLGSENELVKCLECSERGRKVVGLVGNGRRNLELEAADVVAGISSNQND 1040
CCHRDRETVLASLGSENELVKCL CSERGRKV G+VGN +RNLELEA DV G SSN+ND
Sbjct: 181 CCHRDRETVLASLGSENELVKCLPCSERGRKVEGVVGNSKRNLELEAVDVENG-SSNKND 239
Query: 1039 V-------DVEGSLSKGDYNHLNEESSNDNEGKVSVDDIKTGLETIVSCQDDSTPLNGGS 881
V DVE SLSKGD NHLN+ES NDNEGKVSV+++ + +T+VS +D+ P+NGGS
Sbjct: 240 VVDSGVTKDVEVSLSKGDDNHLNKESINDNEGKVSVEEVNS--KTVVSDEDEVAPINGGS 297
Query: 880 VNNSGILEEEKLNGEDKPTEGSEFCYGEKERERFNKILKYYVGTHNFHNFTTRTKAEDPA 701
NN GILEEEK+N ED GS FCYGEKERERFN ILK YVGTHNFHNFTTR K EDP+
Sbjct: 298 ENNLGILEEEKVNREDTAANGSGFCYGEKERERFNNILKCYVGTHNFHNFTTRIKPEDPS 357
Query: 700 ARRFIISFDANTTLVVEGMEFVKCEVVGQSFMLHQIRKMIGLAVAIMRNCAPESLIAKAL 521
A+RFIISFDA+TT+VVEGMEFVKCE+VGQSFMLHQIRKM+GLAVAIMRNCAPESLI KAL
Sbjct: 358 AKRFIISFDASTTVVVEGMEFVKCEIVGQSFMLHQIRKMMGLAVAIMRNCAPESLIEKAL 417
Query: 520 QKDVSINVPTAPEVGLYLDECFFSSYNQKWKDSHEELSMKAYEKEAEDFKIKYIYSHIAS 341
QKDVSI VPTAPEVGLYLDECFF+SYNQKWKD+HEE+SMKAYEKEAEDFK++YIY HIAS
Sbjct: 418 QKDVSITVPTAPEVGLYLDECFFTSYNQKWKDTHEEVSMKAYEKEAEDFKMQYIYPHIAS 477
Query: 340 TEQKDGTVALWLHSLNHRNYPDLRIVDEEGVINDKISETDL 218
TE K+GTV LWLHSLNHRNYPDLRI+D EGV NDK E D+
Sbjct: 478 TEYKEGTVGLWLHSLNHRNYPDLRILDGEGVTNDKKVEVDM 518
>gb|ACJ85562.1| unknown [Medicago truncatula] gi|388491044|gb|AFK33588.1| unknown
[Medicago truncatula]
Length = 530
Score = 832 bits (2148), Expect = 0.0
Identities = 417/521 (80%), Positives = 452/521 (86%), Gaps = 7/521 (1%)
Frame = -3
Query: 1759 MENSDIRTTXXXXXXXPQVAAEEPETKKLKMSTTTSDDEECATATGTKIRYKRRKIAIFF 1580
MENSD + P AEEP TKK+KMSTTTSDDE C TA G+K+RYKRRK+AIFF
Sbjct: 1 MENSDKTPSISSSPALPSAVAEEPATKKVKMSTTTSDDEGCTTAEGSKVRYKRRKVAIFF 60
Query: 1579 AYCGVGYQGMQKNPGAKTIEGDLEEALYASGAVPEQDRGNPKRYDWARSARTDKGVSAVG 1400
AYCGVGYQGMQKNPGAKTIEG+LEEALY SGAVPEQDRG KRYDWARSARTDKGVSAVG
Sbjct: 61 AYCGVGYQGMQKNPGAKTIEGELEEALYVSGAVPEQDRGLSKRYDWARSARTDKGVSAVG 120
Query: 1399 QVVSGRFYIDPPGLVDRLNSNLPLQIRIFGYKRATASFNAKKFCDRRRYVYLIPVFALDP 1220
QVVSGRFYIDPPG VDRLNSNLP QIRIFG+KR TASF+AKKFCDRRRYVYLIPVFALDP
Sbjct: 121 QVVSGRFYIDPPGFVDRLNSNLPSQIRIFGFKRVTASFSAKKFCDRRRYVYLIPVFALDP 180
Query: 1219 CCHRDRETVLASLGSENELVKCLECSERGRKVVGLVGNGRRNLELEAADVVAGISSNQND 1040
CCHRDRETVLASLGSENELVKCL CSERGRKV G+VGN +RNLELEA DV G SSN+ND
Sbjct: 181 CCHRDRETVLASLGSENELVKCLPCSERGRKVEGVVGNSKRNLELEAVDVENG-SSNKND 239
Query: 1039 V-------DVEGSLSKGDYNHLNEESSNDNEGKVSVDDIKTGLETIVSCQDDSTPLNGGS 881
V DVE SLSKGD NHLN+ES NDNEGKVSV+++ + +T+VS QD+ P+NGGS
Sbjct: 240 VVDSGVTKDVEVSLSKGDDNHLNKESINDNEGKVSVEEVNS--KTVVSDQDEVAPINGGS 297
Query: 880 VNNSGILEEEKLNGEDKPTEGSEFCYGEKERERFNKILKYYVGTHNFHNFTTRTKAEDPA 701
NN GILEEEK+N ED GS FCYGEKERERFN ILK YVGTHNFHNFTTR K EDP+
Sbjct: 298 ENNLGILEEEKVNREDTAANGSGFCYGEKERERFNNILKCYVGTHNFHNFTTRIKPEDPS 357
Query: 700 ARRFIISFDANTTLVVEGMEFVKCEVVGQSFMLHQIRKMIGLAVAIMRNCAPESLIAKAL 521
A+RFIISFDA+TT+VVEGMEFVKCE+VGQSFMLHQIRKM+GLAVAIMRNCAPESLI KAL
Sbjct: 358 AKRFIISFDASTTVVVEGMEFVKCEIVGQSFMLHQIRKMMGLAVAIMRNCAPESLIEKAL 417
Query: 520 QKDVSINVPTAPEVGLYLDECFFSSYNQKWKDSHEELSMKAYEKEAEDFKIKYIYSHIAS 341
QKDVSI VPTAPEVGLYLDECFF+SYNQKWKD+HEE+SMKAYEKEAEDFK++YIY HIAS
Sbjct: 418 QKDVSITVPTAPEVGLYLDECFFTSYNQKWKDTHEEVSMKAYEKEAEDFKMQYIYPHIAS 477
Query: 340 TEQKDGTVALWLHSLNHRNYPDLRIVDEEGVINDKISETDL 218
TE K+GTV LWLHSLNHRNYPDL I+D EGV NDK E D+
Sbjct: 478 TEYKEGTVGLWLHSLNHRNYPDLGILDGEGVTNDKKVEVDM 518
>gb|ADN34131.1| tRNA pseudouridine synthase family protein [Cucumis melo subsp. melo]
Length = 519
Score = 691 bits (1782), Expect = 0.0
Identities = 356/492 (72%), Positives = 408/492 (82%), Gaps = 8/492 (1%)
Frame = -3
Query: 1708 QVAAEEPETKKLKMS--TTTSDDEECAT--ATGTKIRYKRRKIAIFFAYCGVGYQGMQKN 1541
Q EEP+ KKLKMS TTTSDDE+ + A K RYKRRK+AIFFAYCGVGYQGMQKN
Sbjct: 15 QPLIEEPDPKKLKMSSTTTTSDDEDVNSNSAAPKKQRYKRRKVAIFFAYCGVGYQGMQKN 74
Query: 1540 PGAKTIEGDLEEALYASGAVPEQDRGNPKRYDWARSARTDKGVSAVGQVVSGRFYIDPPG 1361
PGAKTIE DLEEALY +GAVPEQDRG KRYDWARSARTDKGVSAVGQVVSGRFYIDPPG
Sbjct: 75 PGAKTIEADLEEALYLAGAVPEQDRGLSKRYDWARSARTDKGVSAVGQVVSGRFYIDPPG 134
Query: 1360 LVDRLNSNLPLQIRIFGYKRATASFNAKKFCDRRRYVYLIPVFALDPCCHRDRETVLASL 1181
VDRLNSNL QIRIFGYKR TASFNAKKFCDRRRYVYLIPVFALDP CHRDRE+V ASL
Sbjct: 135 FVDRLNSNLSPQIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFALDPNCHRDRESVKASL 194
Query: 1180 GSENELVKCLECSERGRKVVGLVGNGRRNLELEAADVVAGISSN-QNDVDVEGSLSKGDY 1004
GS+NELVKCLECSERGRKV GL+G +RN E++ A + ISSN N ++V + G
Sbjct: 195 GSDNELVKCLECSERGRKVEGLMG--KRNFEVKTAITESDISSNIVNAIEVSDVQANGVL 252
Query: 1003 NHLNEESSNDNEGKVSVDDIKTGLETIVS---CQDDSTPLNGGSVNNSGILEEEKLNGED 833
S ++ + V V++ T L T+ S + +S+ ++G ++ ++ +E +NG++
Sbjct: 253 EDSATTSDSNKQTSVLVENTATEL-TVASEGIAKSESSEMSGLGNDSEIVVSKESVNGKE 311
Query: 832 KPTEGSEFCYGEKERERFNKILKYYVGTHNFHNFTTRTKAEDPAARRFIISFDANTTLVV 653
KP+ F YGE+E+ RFN+ILK+YVGTHNFHNFTTRTKAEDPAARRFI+SFDA+TT+VV
Sbjct: 312 KPS--GSFKYGEEEKARFNRILKHYVGTHNFHNFTTRTKAEDPAARRFIVSFDASTTVVV 369
Query: 652 EGMEFVKCEVVGQSFMLHQIRKMIGLAVAIMRNCAPESLIAKALQKDVSINVPTAPEVGL 473
EG+EFVKCEVVGQSFMLHQIRKM+GLAVAIMRNCAPESLI KALQKDV+INVPTAPEVGL
Sbjct: 370 EGIEFVKCEVVGQSFMLHQIRKMMGLAVAIMRNCAPESLIEKALQKDVNINVPTAPEVGL 429
Query: 472 YLDECFFSSYNQKWKDSHEELSMKAYEKEAEDFKIKYIYSHIASTEQKDGTVALWLHSLN 293
YLDEC F+SYNQKWKD+HEE+SMKAYE+ AEDFK+K IYSHIASTE KDG VALWLHSLN
Sbjct: 430 YLDECLFTSYNQKWKDTHEEVSMKAYEEVAEDFKMKQIYSHIASTEHKDGAVALWLHSLN 489
Query: 292 HRNYPDLRIVDE 257
HRNYPDLR++DE
Sbjct: 490 HRNYPDLRVIDE 501