BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00008804
         (1920 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003525718.1| PREDICTED: E3 ubiquitin-protein ligase At4g1...   467   e-146
ref|XP_003550874.1| PREDICTED: E3 ubiquitin-protein ligase At4g1...   451   e-142
ref|XP_003517458.1| PREDICTED: E3 ubiquitin-protein ligase At1g1...   422   e-131
ref|XP_003611137.1| E3 ubiquitin-protein ligase [Medicago trunca...   416   e-131
ref|XP_002509740.1| cleavage and polyadenylation specificity fac...   412   e-129

>ref|XP_003525718.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Glycine max]
          Length = 380

 Score =  467 bits (1201), Expect(2) = e-146
 Identities = 237/349 (67%), Positives = 258/349 (73%), Gaps = 1/349 (0%)
 Frame = +1

Query: 205  TTRSPNRSSEDAADPTPLIXXXXXXXXXXXXFIRGASLRQAARFLRQASGRRLMREPSMV 384
            TTRSPNRSSEDAADPTP +             +R  SLR+AARFLRQASGRRLMREPSMV
Sbjct: 4    TTRSPNRSSEDAADPTPFLGTSSDESTSGRRLLRRPSLREAARFLRQASGRRLMREPSMV 63

Query: 385  VRETAAEQLEERQSDWAYSKPVVVLDVLWNXXXXXXXXXXXXXSRSESPSMPLRLWILGY 564
            VRE AAEQLEERQSDWAYSKPVVVLD+LWN             SR+E+P+MPLRLWI+GY
Sbjct: 64   VREAAAEQLEERQSDWAYSKPVVVLDILWNFAFVAAAATVFILSRNENPNMPLRLWIVGY 123

Query: 565  ALQXXXXXXXXXXEYXXXXXXXEQSNANAXXXXXXXXXXXXXXXXXXXHYVNLSQFGDDD 744
            ALQ          EY       EQSNA A                   HYV+L+QF DDD
Sbjct: 124  ALQCVLHVACVCVEYQRRLRRREQSNA-AAIAGGGSGDLGPPSMDGSGHYVSLAQF-DDD 181

Query: 745  GTSMAKHLESANTMFSFIWWIIGFYWVSADGQALLQDSPQLYWLCIXXXXXXXXXXXXCI 924
            G SMAKHLESANTMFSFIWW++GFYWVSAD ++L++DSP LYWLCI            C+
Sbjct: 182  GISMAKHLESANTMFSFIWWVVGFYWVSADSESLVRDSPLLYWLCIAFLGFDVFFVVFCM 241

Query: 925  ALACIIGIAVCCCLPCIIALLYAVADQEGATKEDIEQLSKFRFQR-KGNEKLAGNTQGPV 1101
            ALACI+GIAVCCCLPCIIALLYAVADQEGA+KEDIEQLSKF+FQR + NEKLAGNTQG  
Sbjct: 242  ALACIVGIAVCCCLPCIIALLYAVADQEGASKEDIEQLSKFKFQRTETNEKLAGNTQGAA 301

Query: 1102 GGIMTECHVDCPIEHVLSDEDAECCICLSAYDDGVELRQLPCGHHFHCA 1248
            GGIM EC  D PIEHVLSDEDAECCICLSAYDDGVELRQLPCGHHFHCA
Sbjct: 302  GGIMIECDADSPIEHVLSDEDAECCICLSAYDDGVELRQLPCGHHFHCA 350



 Score = 79.7 bits (195), Expect(2) = e-146
 Identities = 32/36 (88%), Positives = 35/36 (97%)
 Frame = +3

Query: 1311 HHFHCACVDKWLHINATCPLCKYNILKSSSNGQEEV 1418
            HHFHCACVDKWLHINATCPLCKYNILKS+S+ Q+EV
Sbjct: 345  HHFHCACVDKWLHINATCPLCKYNILKSTSHAQDEV 380


>ref|XP_003550874.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Glycine max]
          Length = 379

 Score =  451 bits (1159), Expect(2) = e-142
 Identities = 234/350 (66%), Positives = 251/350 (71%), Gaps = 2/350 (0%)
 Frame = +1

Query: 205  TTRSPNRSSEDAA-DPTPLIXXXXXXXXXXXXFIRGASLRQAARFLRQASGRRLMREPSM 381
            TTRSPNRSSEDAA DPTP +             +R  SLR+AARFLRQASGRRLMREPSM
Sbjct: 5    TTRSPNRSSEDAAADPTPFLATSSDESTSGRLLLRRPSLREAARFLRQASGRRLMREPSM 64

Query: 382  VVRETAAEQLEERQSDWAYSKPVVVLDVLWNXXXXXXXXXXXXXSRSESPSMPLRLWILG 561
            VVRE AAEQLEERQSDWAYSKPVVVLD+LWN             SR+E+P+MPLRLWI+G
Sbjct: 65   VVREAAAEQLEERQSDWAYSKPVVVLDILWNCAFVAAAATVLVLSRNENPNMPLRLWIVG 124

Query: 562  YALQXXXXXXXXXXEYXXXXXXXEQSNANAXXXXXXXXXXXXXXXXXXXHYVNLSQFGDD 741
            YALQ          EY       E SNA A                   HYV+     DD
Sbjct: 125  YALQSVLHVACVCVEYRRRLRHREHSNA-AAVSGDGSGDLSSPSMDGSGHYVSF----DD 179

Query: 742  DGTSMAKHLESANTMFSFIWWIIGFYWVSADGQALLQDSPQLYWLCIXXXXXXXXXXXXC 921
            DG SMAKHLESANTMFSFIWW++GFYWVSAD +AL+QDSP LYWLCI            C
Sbjct: 180  DGISMAKHLESANTMFSFIWWVVGFYWVSADSEALVQDSPLLYWLCIAFLGFDVFFVVFC 239

Query: 922  IALACIIGIAVCCCLPCIIALLYAVADQEGATKEDIEQLSKFRFQR-KGNEKLAGNTQGP 1098
            IALACIIGIAVCCCLPCIIALLYAVADQEGA+KEDIEQLSKF+FQR + NEK AGNTQG 
Sbjct: 240  IALACIIGIAVCCCLPCIIALLYAVADQEGASKEDIEQLSKFKFQRTETNEKHAGNTQGA 299

Query: 1099 VGGIMTECHVDCPIEHVLSDEDAECCICLSAYDDGVELRQLPCGHHFHCA 1248
             GGIM EC  D PIEHVLSDEDAECCICLSAYDDGVELR+LPC HHFHCA
Sbjct: 300  AGGIMIECDADSPIEHVLSDEDAECCICLSAYDDGVELRKLPCSHHFHCA 349



 Score = 82.0 bits (201), Expect(2) = e-142
 Identities = 33/36 (91%), Positives = 36/36 (100%)
 Frame = +3

Query: 1311 HHFHCACVDKWLHINATCPLCKYNILKSSSNGQEEV 1418
            HHFHCACVDKWLHINATCPLCKYNILKS+S+GQ+EV
Sbjct: 344  HHFHCACVDKWLHINATCPLCKYNILKSTSHGQDEV 379


>ref|XP_003517458.1| PREDICTED: E3 ubiquitin-protein ligase At1g12760-like [Glycine max]
          Length = 385

 Score =  422 bits (1086), Expect(2) = e-131
 Identities = 221/358 (61%), Positives = 246/358 (68%), Gaps = 9/358 (2%)
 Frame = +1

Query: 199  MATTRSPNRSSEDAADPTPLIXXXXXXXXXXXX---FIRGASLRQAARFLRQASGRRLMR 369
            MATTRS   SSED  D TPL+               F R   LRQAARFLR+ASGRR+MR
Sbjct: 1    MATTRS---SSEDIVDSTPLLANSGGSSDELTSGRGFSRRQRLRQAARFLRRASGRRMMR 57

Query: 370  EPSMVVRETAAEQLEERQSDWAYSKPVVVLDVLWNXXXXXXXXXXXXXSRSESPSMPLRL 549
            EPSM+VRE AAEQLEERQSDWAYSKPVVVLD++WN             S SE+P MPLRL
Sbjct: 58   EPSMLVREAAAEQLEERQSDWAYSKPVVVLDIVWNFAFVVVAGAVLVLSASEAPGMPLRL 117

Query: 550  WILGYALQXXXXXXXXXXEYXXXXXXXEQSNANAXXXXXXXXXXXXXXXXXXX-----HY 714
            WI+GYA+Q          EY         + ++                          Y
Sbjct: 118  WIVGYAMQCVLHMVCVCVEYRRRRRQQRAAASSVQDRVGSSSGNLSVSSREGSASGSAQY 177

Query: 715  VNLSQFGDDDGTSMAKHLESANTMFSFIWWIIGFYWVSADGQALLQDSPQLYWLCIXXXX 894
            V+L Q  DD+GTS+AKHLESANTMFSF+WWIIGFYWVSA GQAL QDSPQLYWLCI    
Sbjct: 178  VSLGQL-DDEGTSVAKHLESANTMFSFVWWIIGFYWVSAGGQALAQDSPQLYWLCIIFLG 236

Query: 895  XXXXXXXXCIALACIIGIAVCCCLPCIIALLYAVADQEGATKEDIEQLSKFRFQR-KGNE 1071
                    C+ALACIIGIAVCCCLPCIIALLYAVADQEGA+KEDIEQLSKF+F+R + NE
Sbjct: 237  FDVFFVVFCVALACIIGIAVCCCLPCIIALLYAVADQEGASKEDIEQLSKFKFRRIESNE 296

Query: 1072 KLAGNTQGPVGGIMTECHVDCPIEHVLSDEDAECCICLSAYDDGVELRQLPCGHHFHC 1245
            KL G  QGPVGGIMTEC  D PIEHVL++EDAECCICLS+YDDGVELR+LPCGHHFHC
Sbjct: 297  KLTGTIQGPVGGIMTECQADSPIEHVLAEEDAECCICLSSYDDGVELRELPCGHHFHC 354



 Score = 74.3 bits (181), Expect(2) = e-131
 Identities = 30/36 (83%), Positives = 33/36 (91%)
 Frame = +3

Query: 1311 HHFHCACVDKWLHINATCPLCKYNILKSSSNGQEEV 1418
            HHFHC CVDKWL+INATCPLCKYNILKS++  QEEV
Sbjct: 350  HHFHCVCVDKWLYINATCPLCKYNILKSNTLSQEEV 385


>ref|XP_003611137.1| E3 ubiquitin-protein ligase [Medicago truncatula]
            gi|355512472|gb|AES94095.1| E3 ubiquitin-protein ligase
            [Medicago truncatula] gi|388506770|gb|AFK41451.1| unknown
            [Medicago truncatula]
          Length = 387

 Score =  416 bits (1070), Expect(2) = e-131
 Identities = 215/356 (60%), Positives = 241/356 (67%), Gaps = 11/356 (3%)
 Frame = +1

Query: 214  SPNRSSEDAADPTPLIXXXXXXXXXXXXFIRGASLRQ----AARFLRQASGRRLMREPSM 381
            +PNRSS D  D TP +               G   RQ    AARFLRQASGRR MREPS+
Sbjct: 3    TPNRSSSDIIDSTPFLTNPGNGSSSDDLNNSGRRRRQRLLQAARFLRQASGRRTMREPSV 62

Query: 382  VVRETAAEQLEERQSDWAYSKPVVVLDVLWNXXXXXXXXXXXXXSRSESPSMPLRLWILG 561
            VVRE AAEQLEERQSDWAYSKPVV+LD++WN             SR+E+P MPLRLWI G
Sbjct: 63   VVREAAAEQLEERQSDWAYSKPVVILDIVWNFAFVIVAGTALFLSRNEAPEMPLRLWIAG 122

Query: 562  YALQXXXXXXXXXXEYXXXXXXXEQSNANAXXXXXXXXXXXXXXXXXXXH------YVNL 723
            Y LQ          EY         S++NA                          YV+L
Sbjct: 123  YVLQCVLHMVCVCFEYRRRRRFQRSSSSNAVAGSDRIGSGNFSSREGSRSAVSGSSYVSL 182

Query: 724  SQFGDDDGTSMAKHLESANTMFSFIWWIIGFYWVSADGQALLQDSPQLYWLCIXXXXXXX 903
            +QF D++ TS+AKHLESANTMFSFIWWIIGFYWVSA GQAL QDSPQLYWLCI       
Sbjct: 183  AQF-DEESTSVAKHLESANTMFSFIWWIIGFYWVSAGGQALAQDSPQLYWLCIVFLGFDV 241

Query: 904  XXXXXCIALACIIGIAVCCCLPCIIALLYAVADQEGATKEDIEQLSKFRFQR-KGNEKLA 1080
                 C+ALAC+IGIAVCCCLPCIIALLYAVADQEGA+KEDIEQLSKF+F++ + NEK  
Sbjct: 242  FFVVFCVALACVIGIAVCCCLPCIIALLYAVADQEGASKEDIEQLSKFKFRKVESNEKQT 301

Query: 1081 GNTQGPVGGIMTECHVDCPIEHVLSDEDAECCICLSAYDDGVELRQLPCGHHFHCA 1248
             N QGPVGGIMTEC  D PIEHVL++EDAECCICLS+YDDGVELR+LPCGHHFHCA
Sbjct: 302  DNNQGPVGGIMTECRADSPIEHVLAEEDAECCICLSSYDDGVELRELPCGHHFHCA 357



 Score = 79.3 bits (194), Expect(2) = e-131
 Identities = 33/36 (91%), Positives = 35/36 (97%)
 Frame = +3

Query: 1311 HHFHCACVDKWLHINATCPLCKYNILKSSSNGQEEV 1418
            HHFHCACVDKWL+INATCPLCKYNILKSS+ GQEEV
Sbjct: 352  HHFHCACVDKWLYINATCPLCKYNILKSSNLGQEEV 387


>ref|XP_002509740.1| cleavage and polyadenylation specificity factor, putative [Ricinus
            communis] gi|223549639|gb|EEF51127.1| cleavage and
            polyadenylation specificity factor, putative [Ricinus
            communis]
          Length = 383

 Score =  412 bits (1059), Expect(2) = e-129
 Identities = 214/356 (60%), Positives = 242/356 (67%), Gaps = 4/356 (1%)
 Frame = +1

Query: 193  SNMATTRSPNRSSEDAADPTPLIXXXXXXXXXXXXFIRGASLRQAARFLRQASGRRLMRE 372
            +N  +  +P RS++D  D TPL+              R  SLR+AARFLR+AS RR+MRE
Sbjct: 4    TNPTSHPNPIRSNDDIVDTTPLLSSGSQGESNSSS--RRQSLREAARFLRRASSRRMMRE 61

Query: 373  PSMVVRETAAEQLEERQSDWAYSKPVVVLDVLWNXXXXXXXXXXXXXSRSESPSMPLRLW 552
            PSM+VRETAAEQLEERQSDWAYSKPVV+LD+LWN             SR E PSMPLRLW
Sbjct: 62   PSMLVRETAAEQLEERQSDWAYSKPVVILDILWNFAFVAVAIGVLIMSRKEDPSMPLRLW 121

Query: 553  ILGYALQXXXXXXXXXXEYXXXXXXXEQSNANAXXXXXXXXXXXXXXXXXXXHYVNLSQF 732
            I+GY LQ          EY        +                         YV L+Q 
Sbjct: 122  IVGYGLQCVLHMVCVCVEYRRR----RRRRRRVGFGIGSDGNLSSGSRGDSGEYVTLAQL 177

Query: 733  GDDDGTS-MAKHLESANTMFSFIWWIIGFYWVSADGQALLQDSPQLYWLCIXXXXXXXXX 909
             D DGTS +AKHLESANTMFSFIWWIIGFYWVSA GQAL  +SPQLYWLCI         
Sbjct: 178  EDHDGTSSVAKHLESANTMFSFIWWIIGFYWVSAGGQALSHNSPQLYWLCIIFLGFDVFF 237

Query: 910  XXXCIALACIIGIAVCCCLPCIIALLYAVADQEGATKEDIEQLSKFRFQRKGN-EKLAGN 1086
               C+ALACIIGIAVCCCLPCIIA+LYAVADQEGA+KEDIEQLSKF+F+R  N EKL GN
Sbjct: 238  VVFCVALACIIGIAVCCCLPCIIAILYAVADQEGASKEDIEQLSKFKFRRVDNDEKLTGN 297

Query: 1087 --TQGPVGGIMTECHVDCPIEHVLSDEDAECCICLSAYDDGVELRQLPCGHHFHCA 1248
               QGP+GG+MTEC  D P+EH+LS+EDAECCICLSAYDDGVELR+LPCGHHFHCA
Sbjct: 298  GDEQGPLGGVMTECGTDSPVEHILSEEDAECCICLSAYDDGVELRELPCGHHFHCA 353



 Score = 77.4 bits (189), Expect(2) = e-129
 Identities = 32/36 (88%), Positives = 34/36 (94%)
 Frame = +3

Query: 1311 HHFHCACVDKWLHINATCPLCKYNILKSSSNGQEEV 1418
            HHFHCACVDKWL+INATCPLCKYNILKSSS  +EEV
Sbjct: 348  HHFHCACVDKWLYINATCPLCKYNILKSSSRDREEV 383