BLASTX nr result

ID: Glycyrrhiza24_contig00008768 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00008768
         (815 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512577.1| DNA binding protein, putative [Ricinus commu...    86   1e-14
ref|XP_002519325.1| DNA binding protein, putative [Ricinus commu...    72   1e-10
ref|XP_002892508.1| hypothetical protein ARALYDRAFT_471047 [Arab...    69   9e-10
ref|XP_002276443.1| PREDICTED: uncharacterized protein LOC100245...    66   1e-08
emb|CAN65744.1| hypothetical protein VITISV_037761 [Vitis vinifera]    66   1e-08

>ref|XP_002512577.1| DNA binding protein, putative [Ricinus communis]
           gi|223548538|gb|EEF50029.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 230

 Score = 85.9 bits (211), Expect = 1e-14
 Identities = 59/178 (33%), Positives = 80/178 (44%)
 Frame = +2

Query: 65  GECSNCGWKDRWLLHRVLLRGIDRRVCTSCVLRLXXXXXXXXXXXXXXXXXSITSSAHRF 244
           G C NC  K+ +LLH V +RG+ RR+CTSCVLR                     S   + 
Sbjct: 16  GGCGNCSSKETFLLHHVRVRGVHRRLCTSCVLRAHPSSFCPCCFTFYDTSPPPPS---KR 72

Query: 245 ITCVKCSSLTHLQXXXXXXXXXXXXXXXXXXKPNNFTFFPVPESPIDKNLARVLLCASKI 424
           I+C  C+S TH                      N F F  + +  IDK++A VLLCA+KI
Sbjct: 73  ISCSNCTSFTHSHCATSSPPFPFLCPPCADANFNFFNFENINKKTIDKDMATVLLCAAKI 132

Query: 425 ASAAMNKTLASARARADRTXXXXXXXXXXXXXXLEHCSALQKLKRIEGSLEVSGSGNL 598
           A+ +M K +  AR  A+R               LEH   L K K  + S++VS S +L
Sbjct: 133 AANSMAKAVNVARTEAERRVREAAVCRKRAREALEHVLFLAKRKDAD-SVQVSASAHL 189


>ref|XP_002519325.1| DNA binding protein, putative [Ricinus communis]
           gi|223541640|gb|EEF43189.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 186

 Score = 72.4 bits (176), Expect = 1e-10
 Identities = 43/140 (30%), Positives = 65/140 (46%), Gaps = 3/140 (2%)
 Frame = +2

Query: 68  ECSNCGWKDRWLLHRVLLRGIDRRVCTSCVLRLXXXXXXXXXXXXXXXXXSITSSAHRFI 247
           +C  CG ++RWLLH V  R   RR+CT+C+L+                   +  +    +
Sbjct: 6   QCGGCGGENRWLLHNVRHRAAYRRLCTNCILKTHQGLFCPFCFHVYDHDSLLVPAPEERV 65

Query: 248 TCVKCSSLTHLQXXXXXXXXXXXXXXXXXXKPNNFTFFPVP---ESPIDKNLARVLLCAS 418
            C+KC S++HL                      NF+FF +P   +  ID + AR L+ A+
Sbjct: 66  MCLKCPSISHLS--CLPPFHNTSPFLCPPCSSPNFSFFNLPHDDDVSIDIDSARALVAAA 123

Query: 419 KIASAAMNKTLASARARADR 478
           KIA+ +M K  A AR  A+R
Sbjct: 124 KIAAVSMAKAAALARLEAER 143


>ref|XP_002892508.1| hypothetical protein ARALYDRAFT_471047 [Arabidopsis lyrata subsp.
           lyrata] gi|297338350|gb|EFH68767.1| hypothetical protein
           ARALYDRAFT_471047 [Arabidopsis lyrata subsp. lyrata]
          Length = 256

 Score = 69.3 bits (168), Expect = 9e-10
 Identities = 58/202 (28%), Positives = 86/202 (42%), Gaps = 11/202 (5%)
 Frame = +2

Query: 71  CSNCGWKDRWLLHRVLLRGIDRRVCTSCVLRLXXXXXXXXXXXXXXXXXSITSSAHRFIT 250
           C +CG  D W++H V LRG  R  CT C+LR                  S   +  R + 
Sbjct: 26  CDDCGSLDAWVIHTVKLRGSLRFFCTHCLLR---NHPTSFCPTCFAFYDSSPPNTFRRVA 82

Query: 251 CVK--CSSLTHLQXXXXXXXXXXXXXXXXXXKPNNFTFF-PVPES----PIDKNLARVLL 409
           C    C SLTH+                    P +F+FF P+ ++     +DK+L++  L
Sbjct: 83  CSNSNCPSLTHIHCAVDANPPSSYLCPPCL-NPTSFSFFRPIVDANGSRSVDKSLSQAFL 141

Query: 410 CASKIASAAMNKTLASARARADRTXXXXXXXXXXXXXXLEH---CSALQKLKRIEGSL-E 577
           CA+KIA+++MNK + +A+  ADR               LEH     A +K + +   L E
Sbjct: 142 CAAKIAASSMNKAVMAAKCDADRRGREAALAKKRAREALEHVVMLDAKEKARSVVPKLKE 201

Query: 578 VSGSGNLELGTNSNNKVVCKKE 643
            S     +L   SN   V + E
Sbjct: 202 ASVDQKQKLSPASNGGTVKETE 223


>ref|XP_002276443.1| PREDICTED: uncharacterized protein LOC100245891 [Vitis vinifera]
          Length = 314

 Score = 65.9 bits (159), Expect = 1e-08
 Identities = 46/154 (29%), Positives = 62/154 (40%), Gaps = 12/154 (7%)
 Frame = +2

Query: 53  NIVKGECSNCGWKDRWLLHRVLLRGIDRRVCTSCVLRLXXXXXXXXXXXXXXXXXSITSS 232
           +I   EC  C   DRWLLH V  RGI RR+CTSCVL+L                     S
Sbjct: 4   SITTPECGGCSLTDRWLLHHVRHRGIYRRLCTSCVLKLHPGLFCPICFEFYDP----PPS 59

Query: 233 AHRFITCVKCSSLTHLQXXXXXXXXXXXXXXXXXXKPNNFTFFPVPESP----------- 379
            H    C KC S++H                        F+FF    +P           
Sbjct: 60  PHLRSLCQKCPSISHQHCVASHSDSFVCPPCLNP----TFSFFDPARTPKDAQNPQSDRR 115

Query: 380 -IDKNLARVLLCASKIASAAMNKTLASARARADR 478
            ID N A+V+ CA++I+   M K   ++R  ++R
Sbjct: 116 YIDLNSAKVVACAARISFLTMRKAAVASRGESER 149


>emb|CAN65744.1| hypothetical protein VITISV_037761 [Vitis vinifera]
          Length = 1076

 Score = 65.9 bits (159), Expect = 1e-08
 Identities = 46/154 (29%), Positives = 62/154 (40%), Gaps = 12/154 (7%)
 Frame = +2

Query: 53   NIVKGECSNCGWKDRWLLHRVLLRGIDRRVCTSCVLRLXXXXXXXXXXXXXXXXXSITSS 232
            +I   EC  C   DRWLLH V  RGI RR+CTSCVL+L                     S
Sbjct: 766  SITTPECGGCSLTDRWLLHHVRHRGIYRRLCTSCVLKLHPGLFCPICFEFYDP----PPS 821

Query: 233  AHRFITCVKCSSLTHLQXXXXXXXXXXXXXXXXXXKPNNFTFFPVPESP----------- 379
             H    C KC S++H                        F+FF    +P           
Sbjct: 822  PHLRSLCQKCPSISHQHCVASHSDSFVCPPCLNP----TFSFFDPARTPKDAQNPQSDRR 877

Query: 380  -IDKNLARVLLCASKIASAAMNKTLASARARADR 478
             ID N A+V+ CA++I+   M K   ++R  ++R
Sbjct: 878  YIDLNSAKVVACAARISFLTMRKAAVASRGESER 911


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