BLASTX nr result

ID: Glycyrrhiza24_contig00008760 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00008760
         (412 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|ZP_16599981.1| hypothetical protein HMPREF9565_01483 [Propio...   234   5e-60
ref|ZP_04645459.1| pG1 protein [Lactobacillus jensenii 269-3] gi...   129   3e-28
ref|YP_003600533.1| pg1 protein, homology to Homo sapiens [Lacto...    97   1e-18
gb|ABP91180.1| unknown protein [Streptococcus suis 98HAH33] gi|1...    79   1e-18
ref|YP_003602124.1| pg1 protein, homology to Homo sapiens [Lacto...    95   5e-18

>ref|ZP_16599981.1| hypothetical protein HMPREF9565_01483 [Propionibacterium acnes
           HL053PA2] gi|315078257|gb|EFT50296.1| hypothetical
           protein HMPREF9565_01483 [Propionibacterium acnes
           HL053PA2]
          Length = 113

 Score =  234 bits (597), Expect = 5e-60
 Identities = 107/108 (99%), Positives = 108/108 (100%)
 Frame = -1

Query: 382 LRIPPLHQEFHSPLPSSSQPVSKARSGLSPKITLPTRSTTYEPFTPNKSGQRSHPTYHRG 203
           +RIPPLHQEFHSPLPSSSQPVSKARSGLSPKITLPTRSTTYEPFTPNKSGQRSHPTYHRG
Sbjct: 1   MRIPPLHQEFHSPLPSSSQPVSKARSGLSPKITLPTRSTTYEPFTPNKSGQRSHPTYHRG 60

Query: 202 CWHVVSRCFFTHYRHSRFVTGESGLQPEGRHPARGVAASGFRPLCNIP 59
           CWHVVSRCFFTHYRHSRFVTGESGLQPEGRHPARGVAASGFRPLCNIP
Sbjct: 61  CWHVVSRCFFTHYRHSRFVTGESGLQPEGRHPARGVAASGFRPLCNIP 108


>ref|ZP_04645459.1| pG1 protein [Lactobacillus jensenii 269-3]
           gi|238832245|gb|EEQ24559.1| pG1 protein [Lactobacillus
           jensenii 269-3]
          Length = 174

 Score =  129 bits (323), Expect = 3e-28
 Identities = 73/144 (50%), Positives = 85/144 (59%), Gaps = 7/144 (4%)
 Frame = -1

Query: 412 RLRHWCSS*YLRIPPLHQEFHSPLPSSSQPVSKARSGLSPKITLPTRSTTYEPFTPNKSG 233
           RLRHWCSS YLRIPPLH EF SPL  S   VS A   LS +++  T  +    FTPNKSG
Sbjct: 14  RLRHWCSSIYLRIPPLHMEFRSPLLHSRLTVSDAVLRLSRRLSHQTYQSACARFTPNKSG 73

Query: 232 QRSHPTYHRGCWHVVSRCFFTHYRH---SRFVTGESG----LQPEGRHPARGVAASGFRP 74
           QR  PTY+RGCWHVVSR F   YR    S ++   S       P+       +    F  
Sbjct: 74  QRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTELYDPKTFFTHAALLHQTFVH 133

Query: 73  LCNIPTAASRRSLGRISVPMWPVT 2
               PTAASRRSLGR+SVPMWP++
Sbjct: 134 CGRFPTAASRRSLGRVSVPMWPIS 157


>ref|YP_003600533.1| pg1 protein, homology to Homo sapiens [Lactobacillus crispatus ST1]
           gi|295692302|ref|YP_003600912.1| pg1 protein, homology
           to Homo sapiens [Lactobacillus crispatus ST1]
           gi|295692314|ref|YP_003600924.1| pg1 protein, homology
           to Homo sapiens [Lactobacillus crispatus ST1]
           gi|295030029|emb|CBL49508.1| PG1 protein, homology to
           Homo sapiens [Lactobacillus crispatus ST1]
           gi|295030408|emb|CBL49887.1| PG1 protein, homology to
           Homo sapiens [Lactobacillus crispatus ST1]
           gi|295030420|emb|CBL49899.1| PG1 protein, homology to
           Homo sapiens [Lactobacillus crispatus ST1]
          Length = 144

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 60/126 (47%), Positives = 71/126 (56%), Gaps = 7/126 (5%)
 Frame = -1

Query: 358 EFHSPLPSSSQPVSKARSGLSPKITLPTRSTTYEPFTPNKSGQRSHPTYHRGCWHVVSRC 179
           EFHSPL  S + VS A   LS  ++  T S+    FTPNKSGQR  PTY+RGCWHVVSR 
Sbjct: 2   EFHSPLLHSRKTVSDAVPRLSRGLSHQTYSSACARFTPNKSGQRLPPTYYRGCWHVVSRD 61

Query: 178 FFTHYRH--SRFVTGESGLQPEGRHPARGVA-ASGFRPLC----NIPTAASRRSLGRISV 20
           F   YR   + +    S    E   P      A+     C      PTAASRRSLGR+SV
Sbjct: 62  FLVDYRQIKASYYLYPSSPTTELYDPKTFFTHAALLHQTCVHCGRFPTAASRRSLGRVSV 121

Query: 19  PMWPVT 2
           PMWP++
Sbjct: 122 PMWPIS 127


>gb|ABP91180.1| unknown protein [Streptococcus suis 98HAH33]
           gi|145690754|gb|ABP91259.1| unknown protein
           [Streptococcus suis 98HAH33] gi|145690985|gb|ABP91490.1|
           unknown protein [Streptococcus suis 98HAH33]
           gi|145691080|gb|ABP91585.1| unknown protein
           [Streptococcus suis 98HAH33]
          Length = 186

 Score = 79.0 bits (193), Expect(3) = 1e-18
 Identities = 44/88 (50%), Positives = 50/88 (56%), Gaps = 7/88 (7%)
 Frame = -1

Query: 301 LSPKITLPTRSTTYEPFTPNKSGQRSHPTYHRGCWHVVSRCFFTHYRH-------SRFVT 143
           LS  + L T  T    FTPNKSGQRS PTY+RGCWHVVSR F   YR        S+F +
Sbjct: 94  LSHSLLLQTYQTACARFTPNKSGQRSGPTYYRGCWHVVSRPFLVRYRQVRNFPLFSQFFS 153

Query: 142 GESGLQPEGRHPARGVAASGFRPLCNIP 59
               L+ E    +RGVA SG  PL  IP
Sbjct: 154 YNRALRSENLLHSRGVARSGLPPLPKIP 181



 Score = 35.8 bits (81), Expect(3) = 1e-18
 Identities = 19/34 (55%), Positives = 21/34 (61%)
 Frame = -3

Query: 407 SPLVFLLISAHSTAPPGIPFSPTFLKSTRIESTL 306
           SP VFL IS H TA  GIP SP+ LK    +S L
Sbjct: 59  SPPVFLHISTHFTATHGIPLSPSALKFDSFQSVL 92



 Score = 23.1 bits (48), Expect(3) = 1e-18
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -3

Query: 83  LPPIVQYSHCCLP 45
           LPP+ +  +CCLP
Sbjct: 174 LPPLPKIPYCCLP 186


>ref|YP_003602124.1| pg1 protein, homology to Homo sapiens [Lactobacillus crispatus ST1]
           gi|295031620|emb|CBL51099.1| PG1 protein, homology to
           Homo sapiens [Lactobacillus crispatus ST1]
          Length = 144

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 59/126 (46%), Positives = 70/126 (55%), Gaps = 7/126 (5%)
 Frame = -1

Query: 358 EFHSPLPSSSQPVSKARSGLSPKITLPTRSTTYEPFTPNKSGQRSHPTYHRGCWHVVSRC 179
           EFHSPL  S + VS A   LS  ++  T S+    FTPNKSGQR  PTY+RGCWHVVSR 
Sbjct: 2   EFHSPLLHSRKTVSDAVPRLSRGLSHQTYSSACARFTPNKSGQRLPPTYYRGCWHVVSRD 61

Query: 178 FFTHYRH--SRFVTGESGLQPEGRHPARGVA-ASGFRPLC----NIPTAASRRSLGRISV 20
           F   YR   + +    S    E   P      A+     C      PTAASR SLGR+SV
Sbjct: 62  FLVDYRQIKASYYLYPSSPTTELYDPKTFFTHAALLHQTCVHCGRFPTAASRMSLGRVSV 121

Query: 19  PMWPVT 2
           PMWP++
Sbjct: 122 PMWPIS 127


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