BLASTX nr result

ID: Glycyrrhiza24_contig00008704 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00008704
         (818 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003536456.1| PREDICTED: U3 small nucleolar ribonucleoprot...   335   7e-90
gb|AFK40090.1| unknown [Lotus japonicus]                              323   4e-86
gb|AFK45487.1| unknown [Lotus japonicus]                              321   1e-85
ref|XP_003630714.1| U3 small nucleolar ribonucleoprotein IMP3 [M...   319   5e-85
ref|XP_003548526.1| PREDICTED: U3 small nucleolar ribonucleoprot...   313   4e-83

>ref|XP_003536456.1| PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP3-like
           [Glycine max] gi|356575988|ref|XP_003556117.1|
           PREDICTED: U3 small nucleolar ribonucleoprotein protein
           IMP3-like [Glycine max] gi|255637789|gb|ACU19216.1|
           unknown [Glycine max]
          Length = 182

 Score =  335 bits (859), Expect = 7e-90
 Identities = 160/168 (95%), Positives = 165/168 (98%)
 Frame = -1

Query: 629 VNFLEWKREGGHRENLIMQRYHVTGRDDYKKYSGLCQMVQKLVNMLKQMDPKDPFRIDMT 450
           VNFLEWKREGGHRENLIMQRYHVTGRDDYKKYSGLC MVQKLVN+LKQMDPKDPFR+DMT
Sbjct: 15  VNFLEWKREGGHRENLIMQRYHVTGRDDYKKYSGLCHMVQKLVNILKQMDPKDPFRVDMT 74

Query: 449 DKLLEKLYNMGVIPTRQSITLCERLTVSSFCRRRLSSALVRLKFAEHLKEAATYIEQGHV 270
           DKLLEKLYNMGVIPTRQSITLCERLTVSSFCRRRLS+ LVRLKFAEHLKEA TYIEQGH+
Sbjct: 75  DKLLEKLYNMGVIPTRQSITLCERLTVSSFCRRRLSTVLVRLKFAEHLKEAVTYIEQGHI 134

Query: 269 RVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDLMN 126
           RVGPETVTDPAFLVTRNMEDF+TWVDSSKIKRKVLQYNDKLDDYDLMN
Sbjct: 135 RVGPETVTDPAFLVTRNMEDFVTWVDSSKIKRKVLQYNDKLDDYDLMN 182


>gb|AFK40090.1| unknown [Lotus japonicus]
          Length = 182

 Score =  323 bits (827), Expect = 4e-86
 Identities = 154/168 (91%), Positives = 161/168 (95%)
 Frame = -1

Query: 629 VNFLEWKREGGHRENLIMQRYHVTGRDDYKKYSGLCQMVQKLVNMLKQMDPKDPFRIDMT 450
           VNFLEWKREGGHRENL+MQRYHVTGRDDYKKYS LC MVQKLVN+LKQMDPKDP R+DMT
Sbjct: 15  VNFLEWKREGGHRENLVMQRYHVTGRDDYKKYSSLCGMVQKLVNILKQMDPKDPVRVDMT 74

Query: 449 DKLLEKLYNMGVIPTRQSITLCERLTVSSFCRRRLSSALVRLKFAEHLKEAATYIEQGHV 270
           DKLLEKLYNMGVIPTRQSIT CE LTVSSFCRRRLS+ LVRLKFAEHLKEA TYIEQGHV
Sbjct: 75  DKLLEKLYNMGVIPTRQSITQCEHLTVSSFCRRRLSTVLVRLKFAEHLKEAVTYIEQGHV 134

Query: 269 RVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDLMN 126
           RVGPETVTDPAFLVTRNMEDF+TWVDSSKIKRKVL+YNDKLDDYD+MN
Sbjct: 135 RVGPETVTDPAFLVTRNMEDFVTWVDSSKIKRKVLKYNDKLDDYDIMN 182


>gb|AFK45487.1| unknown [Lotus japonicus]
          Length = 182

 Score =  321 bits (822), Expect = 1e-85
 Identities = 153/168 (91%), Positives = 160/168 (95%)
 Frame = -1

Query: 629 VNFLEWKREGGHRENLIMQRYHVTGRDDYKKYSGLCQMVQKLVNMLKQMDPKDPFRIDMT 450
           VNFLEWKREGGHRENL+MQRYHVTGRDDYKKYS LC MVQKLVN+LKQMDPKDP R+DMT
Sbjct: 15  VNFLEWKREGGHRENLVMQRYHVTGRDDYKKYSSLCGMVQKLVNILKQMDPKDPVRVDMT 74

Query: 449 DKLLEKLYNMGVIPTRQSITLCERLTVSSFCRRRLSSALVRLKFAEHLKEAATYIEQGHV 270
           DKLLEKLYNMGVIPTRQSIT CE LTVSSFCRRRLS+ LVRLKFAEHLKEA TYIEQGHV
Sbjct: 75  DKLLEKLYNMGVIPTRQSITQCEHLTVSSFCRRRLSTVLVRLKFAEHLKEAVTYIEQGHV 134

Query: 269 RVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDLMN 126
           RVGPETVTDPAFLVTRNMEDF+ WVDSSKIKRKVL+YNDKLDDYD+MN
Sbjct: 135 RVGPETVTDPAFLVTRNMEDFVAWVDSSKIKRKVLKYNDKLDDYDIMN 182


>ref|XP_003630714.1| U3 small nucleolar ribonucleoprotein IMP3 [Medicago truncatula]
           gi|217075252|gb|ACJ85986.1| unknown [Medicago
           truncatula] gi|355524736|gb|AET05190.1| U3 small
           nucleolar ribonucleoprotein IMP3 [Medicago truncatula]
           gi|388502894|gb|AFK39513.1| unknown [Medicago
           truncatula]
          Length = 182

 Score =  319 bits (817), Expect = 5e-85
 Identities = 150/168 (89%), Positives = 161/168 (95%)
 Frame = -1

Query: 629 VNFLEWKREGGHRENLIMQRYHVTGRDDYKKYSGLCQMVQKLVNMLKQMDPKDPFRIDMT 450
           VNFLEWKREGGHREN++MQRYHVTGRDDYKKYS +C+MVQKLVN +KQMDPKDPFR+DMT
Sbjct: 15  VNFLEWKREGGHRENMVMQRYHVTGRDDYKKYSSICRMVQKLVNTVKQMDPKDPFRVDMT 74

Query: 449 DKLLEKLYNMGVIPTRQSITLCERLTVSSFCRRRLSSALVRLKFAEHLKEAATYIEQGHV 270
           DKLLEKLYNMGVI TRQSITLCERLTVS+FCRRRLS+ LV+LKFAEHLKEA TYIEQGHV
Sbjct: 75  DKLLEKLYNMGVISTRQSITLCERLTVSAFCRRRLSTVLVKLKFAEHLKEAVTYIEQGHV 134

Query: 269 RVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDLMN 126
           RVGP T+TDPA+LVTRNMED ITWVDSSKIKRKVLQYNDKLDDYDLMN
Sbjct: 135 RVGPNTITDPAYLVTRNMEDLITWVDSSKIKRKVLQYNDKLDDYDLMN 182


>ref|XP_003548526.1| PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP3-like
           [Glycine max]
          Length = 187

 Score =  313 bits (801), Expect = 4e-83
 Identities = 152/168 (90%), Positives = 158/168 (94%)
 Frame = -1

Query: 629 VNFLEWKREGGHRENLIMQRYHVTGRDDYKKYSGLCQMVQKLVNMLKQMDPKDPFRIDMT 450
           V FLEWKREGGHRENLIMQRYH+TG DDYKKYSGLC MVQKLVN+LKQMD KDPFRIDMT
Sbjct: 20  VIFLEWKREGGHRENLIMQRYHITGLDDYKKYSGLCHMVQKLVNILKQMDQKDPFRIDMT 79

Query: 449 DKLLEKLYNMGVIPTRQSITLCERLTVSSFCRRRLSSALVRLKFAEHLKEAATYIEQGHV 270
           DKLLEKLYNMGVIPTRQSI LC+RLTVSSFCR RLS+ LVRLKFAEHLKEA TYIEQGH+
Sbjct: 80  DKLLEKLYNMGVIPTRQSIMLCKRLTVSSFCRHRLSTVLVRLKFAEHLKEAVTYIEQGHI 139

Query: 269 RVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDLMN 126
           RVGPETVTDPAFLVTRNMEDF+T VDS KIKRKVLQYNDKLDDYDLMN
Sbjct: 140 RVGPETVTDPAFLVTRNMEDFVTLVDSFKIKRKVLQYNDKLDDYDLMN 187


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