BLASTX nr result

ID: Glycyrrhiza24_contig00008681 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00008681
         (615 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003625096.1| RecA [Medicago truncatula] gi|355500111|gb|A...   186   2e-45
ref|XP_003554153.1| PREDICTED: DNA repair protein recA homolog 2...   182   4e-44
ref|XP_002278976.2| PREDICTED: DNA repair protein recA homolog 2...   135   6e-30
ref|XP_003520507.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair p...   129   4e-28
ref|XP_002308017.1| predicted protein [Populus trichocarpa] gi|2...   128   9e-28

>ref|XP_003625096.1| RecA [Medicago truncatula] gi|355500111|gb|AES81314.1| RecA
           [Medicago truncatula]
          Length = 394

 Score =  186 bits (473), Expect = 2e-45
 Identities = 93/122 (76%), Positives = 100/122 (81%)
 Frame = -2

Query: 614 EEVTCGGNALRFYSAVRLRLSRMGLIKTEDKVEGMLVCVQVIXXXXXXXXXXXXXLGIKF 435
           EEVTCGGNALRFY+AVRLRLSRMGLIKTEDKVEG+ VC QV+             LGIKF
Sbjct: 272 EEVTCGGNALRFYAAVRLRLSRMGLIKTEDKVEGITVCAQVVKNKLAPAAMKKAELGIKF 331

Query: 434 GRGFCHESEVLDLACEHGLIMKDEGNYFIEGEAFSSREAAELFLANNEGVCDKLVMDMRR 255
           GRGFC ESEV  LACEHGLIMKDEGNYFIEGE F+SREAAE FLA N+ +CDKLVMDM+R
Sbjct: 332 GRGFCQESEVFALACEHGLIMKDEGNYFIEGEPFTSREAAEQFLAKNKRICDKLVMDMKR 391

Query: 254 LY 249
           LY
Sbjct: 392 LY 393


>ref|XP_003554153.1| PREDICTED: DNA repair protein recA homolog 2, mitochondrial-like
           [Glycine max]
          Length = 386

 Score =  182 bits (462), Expect = 4e-44
 Identities = 88/123 (71%), Positives = 100/123 (81%)
 Frame = -2

Query: 614 EEVTCGGNALRFYSAVRLRLSRMGLIKTEDKVEGMLVCVQVIXXXXXXXXXXXXXLGIKF 435
           EEVTCGGNALRFY+AVRLRLSR+ LIKTEDKVEG+++C QV+             LGIKF
Sbjct: 264 EEVTCGGNALRFYAAVRLRLSRVRLIKTEDKVEGVMICAQVVKNKLAPAATKRAELGIKF 323

Query: 434 GRGFCHESEVLDLACEHGLIMKDEGNYFIEGEAFSSREAAELFLANNEGVCDKLVMDMRR 255
           GRGFCHES+VLDLACEHG+ +K EG+YFIEG +F SREAAELFLA N  VCDK+V DMRR
Sbjct: 324 GRGFCHESDVLDLACEHGIFVKHEGSYFIEGNSFDSREAAELFLAQNHAVCDKVVKDMRR 383

Query: 254 LYF 246
           LYF
Sbjct: 384 LYF 386


>ref|XP_002278976.2| PREDICTED: DNA repair protein recA homolog 2, mitochondrial-like
           [Vitis vinifera] gi|296087050|emb|CBI33377.3| unnamed
           protein product [Vitis vinifera]
          Length = 398

 Score =  135 bits (340), Expect = 6e-30
 Identities = 67/123 (54%), Positives = 88/123 (71%)
 Frame = -2

Query: 614 EEVTCGGNALRFYSAVRLRLSRMGLIKTEDKVEGMLVCVQVIXXXXXXXXXXXXXLGIKF 435
           +EVTCGGNALRFY+AVRLR+ R GL++TEDKV G+ VCVQV+              GI+F
Sbjct: 273 DEVTCGGNALRFYAAVRLRVMRTGLLRTEDKVTGLGVCVQVVKNKLAHATKKADL-GIQF 331

Query: 434 GRGFCHESEVLDLACEHGLIMKDEGNYFIEGEAFSSREAAELFLANNEGVCDKLVMDMRR 255
           GRG C ESEVL+LACEHG+I K+   Y IEGEAF++++ AE ++A N GV +++V  +R 
Sbjct: 332 GRGICFESEVLELACEHGVIWKEGSKYIIEGEAFNNKQEAEQYMAQNSGVLERIVSFLRS 391

Query: 254 LYF 246
             F
Sbjct: 392 HLF 394


>ref|XP_003520507.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair protein recA homolog 2,
           mitochondrial-like [Glycine max]
          Length = 267

 Score =  129 bits (324), Expect = 4e-28
 Identities = 60/94 (63%), Positives = 70/94 (74%)
 Frame = -2

Query: 527 DKVEGMLVCVQVIXXXXXXXXXXXXXLGIKFGRGFCHESEVLDLACEHGLIMKDEGNYFI 348
           D VEG+++C QV+              GIKFGRGFCHES+VLDLACEHG+I+K EG+YFI
Sbjct: 174 DSVEGVMICAQVVKNKLAPAATKRAEQGIKFGRGFCHESDVLDLACEHGIIVKHEGSYFI 233

Query: 347 EGEAFSSREAAELFLANNEGVCDKLVMDMRRLYF 246
           EG +  SREAAELFLA N+ VCDKLV DM RLYF
Sbjct: 234 EGSSLDSREAAELFLAQNDAVCDKLVRDMTRLYF 267


>ref|XP_002308017.1| predicted protein [Populus trichocarpa] gi|222853993|gb|EEE91540.1|
           predicted protein [Populus trichocarpa]
          Length = 335

 Score =  128 bits (321), Expect = 9e-28
 Identities = 67/119 (56%), Positives = 81/119 (68%)
 Frame = -2

Query: 614 EEVTCGGNALRFYSAVRLRLSRMGLIKTEDKVEGMLVCVQVIXXXXXXXXXXXXXLGIKF 435
           EEVTCGGNAL+FYSAVRLR+ R GL+KT DKV G+ VC QV+              GI+F
Sbjct: 210 EEVTCGGNALKFYSAVRLRMIRTGLLKTGDKVTGLGVCAQVVKNKLAPAMTKAEI-GIQF 268

Query: 434 GRGFCHESEVLDLACEHGLIMKDEGNYFIEGEAFSSREAAELFLANNEGVCDKLVMDMR 258
           GRGFC ESEVL+LACE  LI K+  +Y I  E FS+  AAE +L  NEGV D++V  +R
Sbjct: 269 GRGFCFESEVLELACEQSLIKKEGSSYVIGREVFSNEHAAEQYLIENEGVLDQIVAKLR 327


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