BLASTX nr result

ID: Glycyrrhiza24_contig00008659 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00008659
         (979 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003541606.1| PREDICTED: RNA-binding protein 28-like [Glyc...   427   e-117
ref|XP_003539635.1| PREDICTED: RNA-binding protein 28-like [Glyc...   418   e-114
ref|XP_003590983.1| Eukaryotic translation initiation factor 3 s...   402   e-110
ref|XP_002313773.1| predicted protein [Populus trichocarpa] gi|2...   261   1e-67
ref|XP_002274081.1| PREDICTED: uncharacterized protein LOC100257...   253   5e-65

>ref|XP_003541606.1| PREDICTED: RNA-binding protein 28-like [Glycine max]
          Length = 956

 Score =  427 bits (1098), Expect = e-117
 Identities = 216/298 (72%), Positives = 248/298 (83%)
 Frame = +3

Query: 3    KKLCIDAVISRATKQKPVLRQIKFLKDGKNGKASQEHYSRGVAFVEFSEHQHALVALRVL 182
            KKLCIDAVISRATKQKPV+RQIKFLK+ K G  +QE YSRGVAFVEFSEHQHALVALRVL
Sbjct: 666  KKLCIDAVISRATKQKPVIRQIKFLKNEKKGNVAQERYSRGVAFVEFSEHQHALVALRVL 725

Query: 183  NNNPETFGPEHRPIVEFALDNVQTLKLRKAKQQSWQQQAPHDDNNSEENDKPSKAGVHSH 362
            NNNPETFGPEHRPIVEFALDNVQTLKLRKAK QS Q QAP DDNN+ +NDKP     H  
Sbjct: 726  NNNPETFGPEHRPIVEFALDNVQTLKLRKAKLQS-QLQAPQDDNNAMDNDKPGTVEGHK- 783

Query: 363  AIKDRKRKSQEHDNPAKDSVQNTNGELGGKVANGKSPQGHKSKRQKGNNNKTTSSEVSSL 542
             +K+RKRKSQEHD PA +S  NTNGELG  V+NGKSPQGHKSKRQKGNN         +L
Sbjct: 784  PVKNRKRKSQEHDKPAMESALNTNGELGVAVSNGKSPQGHKSKRQKGNNKSK-----KAL 838

Query: 543  KDNPKALSMKSKNNQDGQNPSGTLLEAQNTAIDTNRKKSGNKDDVGYRKRKMQNQEEQGG 722
            K+NP+ALSMK KNN++GQ+  G  LE QNTA  +NR+KSGN++D G+RKRK+QNQE++ G
Sbjct: 839  KENPEALSMKPKNNENGQSNGGASLEGQNTATYSNRRKSGNREDWGFRKRKIQNQEQEAG 898

Query: 723  EKVSRRRQKKKKEPAGKEVVDKLDMLIEQYRSKFSHKGSKGNDGEKQDSKQLRRWFQS 896
            +KVS++R KK K+  GK+V DKLDMLIEQYRSKFSHKGS+ NDGE++ SKQLR+WFQS
Sbjct: 899  QKVSKKRPKKNKDSVGKDVGDKLDMLIEQYRSKFSHKGSQENDGERKPSKQLRKWFQS 956


>ref|XP_003539635.1| PREDICTED: RNA-binding protein 28-like [Glycine max]
          Length = 958

 Score =  418 bits (1074), Expect = e-114
 Identities = 215/299 (71%), Positives = 242/299 (80%), Gaps = 1/299 (0%)
 Frame = +3

Query: 3    KKLCIDAVISRATKQKPVLRQIKFLKDGKNGKASQEHYSRGVAFVEFSEHQHALVALRVL 182
            KK CIDAV+SRATKQKPV+RQIKFLK+ K G  +QE YSRGVAFVEFSEHQHALVALRVL
Sbjct: 667  KKFCIDAVVSRATKQKPVIRQIKFLKNEKKGNVAQERYSRGVAFVEFSEHQHALVALRVL 726

Query: 183  NNNPETFGPEHRPIVEFALDNVQTLKLRKAKQQSWQQQAPHDDNNSEENDKPSKAGVHSH 362
            NNNPETFGPEHRPIVEFALDNVQTLKLRKAK QS Q Q P  DNN+ +ND P        
Sbjct: 727  NNNPETFGPEHRPIVEFALDNVQTLKLRKAKLQS-QHQTPQVDNNAMDNDNPGTV-EGCK 784

Query: 363  AIKDRKRKSQEHDNPAKDSVQNTNGELGGKVANGKSPQGHKSKRQKGNNNKTTSSEVSSL 542
             +KDRKRKS+EHD PAK+SV NTNGE G  VANGKSPQGHKSKRQKGNN         +L
Sbjct: 785  PVKDRKRKSREHDEPAKESVLNTNGESGVAVANGKSPQGHKSKRQKGNNKSK-----KAL 839

Query: 543  KDNPK-ALSMKSKNNQDGQNPSGTLLEAQNTAIDTNRKKSGNKDDVGYRKRKMQNQEEQG 719
            K+N + ALSMK KNN++G N  G  LE QNTA D+NR+KSGNKDDVG+RKRKMQNQE++ 
Sbjct: 840  KENREAALSMKPKNNENGHNNGGASLEGQNTATDSNRRKSGNKDDVGFRKRKMQNQEQEA 899

Query: 720  GEKVSRRRQKKKKEPAGKEVVDKLDMLIEQYRSKFSHKGSKGNDGEKQDSKQLRRWFQS 896
            G+KV ++R KK K   GK+VVDKLDML+EQY+SKFSHKGS  NDGEK+ SKQLR+WFQS
Sbjct: 900  GQKVLKKRLKKNKGSVGKDVVDKLDMLVEQYKSKFSHKGSLENDGEKRHSKQLRKWFQS 958


>ref|XP_003590983.1| Eukaryotic translation initiation factor 3 subunit G [Medicago
            truncatula] gi|355480031|gb|AES61234.1| Eukaryotic
            translation initiation factor 3 subunit G [Medicago
            truncatula]
          Length = 962

 Score =  402 bits (1033), Expect = e-110
 Identities = 211/300 (70%), Positives = 245/300 (81%), Gaps = 2/300 (0%)
 Frame = +3

Query: 3    KKLCIDAVISRATKQKPVLRQIKFLKDGKNGKASQEH-YSRGVAFVEFSEHQHALVALRV 179
            K LCIDAVISRATKQ PV+RQIK LKDG+ GKA+QE  YSRGVAF+EFSEHQHALVALRV
Sbjct: 667  KTLCIDAVISRATKQIPVIRQIKILKDGRKGKATQEQQYSRGVAFLEFSEHQHALVALRV 726

Query: 180  LNNNPETFGPEHRPIVEFALDNVQTLKLRKAKQQSWQQQAPHDDNNSEENDKPSKAGVHS 359
            LNNNPETFGPEHRPIVEFALDN+Q LKLR  K Q +QQ+APH+ N+  ENDKP+ AGV++
Sbjct: 727  LNNNPETFGPEHRPIVEFALDNIQKLKLRNEKLQ-YQQRAPHNGNSRNENDKPNNAGVYT 785

Query: 360  HAIKDRKRKSQEHDNPAKDSVQNTNGELGGKVANGKSPQGHKSKRQKGNNNKTTSSEVSS 539
            H   DRKRKSQEH  PAKD   ++N E GG+V NGKSPQG KSKRQKG + K+T+++V S
Sbjct: 786  HGT-DRKRKSQEHGKPAKDLAPDSNSEHGGRVPNGKSPQGGKSKRQKG-DPKSTNTDVIS 843

Query: 540  LKDNPKALS-MKSKNNQDGQNPSGTLLEAQNTAIDTNRKKSGNKDDVGYRKRKMQNQEEQ 716
             K++PKA S  K KNNQDGQN    L E +N++ID+NRK SG K+D  + KRKM NQ EQ
Sbjct: 844  SKESPKASSARKLKNNQDGQNHGAKLHEGKNSSIDSNRKISGKKEDAVFGKRKMHNQ-EQ 902

Query: 717  GGEKVSRRRQKKKKEPAGKEVVDKLDMLIEQYRSKFSHKGSKGNDGEKQDSKQLRRWFQS 896
             GEKVSR+R KK K+  GK+ VDKLDMLIEQYRSKFSHKGS+GNDGEK+ SKQLR+WFQS
Sbjct: 903  AGEKVSRKRPKKNKDSVGKDTVDKLDMLIEQYRSKFSHKGSQGNDGEKKQSKQLRKWFQS 962


>ref|XP_002313773.1| predicted protein [Populus trichocarpa] gi|222850181|gb|EEE87728.1|
            predicted protein [Populus trichocarpa]
          Length = 974

 Score =  261 bits (668), Expect = 1e-67
 Identities = 150/302 (49%), Positives = 192/302 (63%), Gaps = 4/302 (1%)
 Frame = +3

Query: 3    KKLCIDAVISRATKQKPVLRQIKFLKDGKNGKASQEHYSRGVAFVEFSEHQHALVALRVL 182
            KKL IDAV SRATKQKPV+RQ+KFLK+ K GK   + +SRGVAFVEF+EHQHALVALRVL
Sbjct: 675  KKLFIDAVTSRATKQKPVIRQMKFLKNVKKGKVVTKDHSRGVAFVEFTEHQHALVALRVL 734

Query: 183  NNNPETFGPEHRPIVEFALDNVQTLKLRKAKQQSWQQQAPHDDNNSEENDK-PSKAGVHS 359
            NNNPETFGPEHRPIV FALDNVQTLKLRKAK Q  QQ+   D  +++END+  +   + S
Sbjct: 735  NNNPETFGPEHRPIVSFALDNVQTLKLRKAKLQVQQQETHKDFQDTQENDESQTPNAIPS 794

Query: 360  HAIKDRKRKSQEHDNPAKDSVQNTNGELGGKVANGKSPQGHKSKRQKGNNNKTTSSEVSS 539
                 RKRKS+  +   KD   N   E+  K +   S +   +K++K  +N       +S
Sbjct: 795  QKEMSRKRKSRVENRAVKDPESNRMDEVKNKDSYRTSLKEQTAKKKK--SNPGAEDIQTS 852

Query: 540  LKDNPKALSMKSKNNQDGQNPSGTLLEAQNTAIDTNRKKSGNKDDVGYRKRKMQNQEEQ- 716
             KD  ++   K+K +Q  Q   G   +  N+       K   + D+   KRK  NQ E+ 
Sbjct: 853  AKDKRESREQKAKGSQHKQKDEGRKSDGGNSVNSEKIVKPFKEADLWLTKRKRPNQTEEN 912

Query: 717  --GGEKVSRRRQKKKKEPAGKEVVDKLDMLIEQYRSKFSHKGSKGNDGEKQDSKQLRRWF 890
              G     R+R KK K+P G++V DKLDMLIEQY+SKFS + +   +GEKQ +KQL+RWF
Sbjct: 913  KGGKSSEKRKRPKKNKDPVGQDVADKLDMLIEQYKSKFSKQTADKPEGEKQANKQLKRWF 972

Query: 891  QS 896
            QS
Sbjct: 973  QS 974


>ref|XP_002274081.1| PREDICTED: uncharacterized protein LOC100257200 [Vitis vinifera]
          Length = 972

 Score =  253 bits (646), Expect = 5e-65
 Identities = 143/309 (46%), Positives = 193/309 (62%), Gaps = 11/309 (3%)
 Frame = +3

Query: 3    KKLCIDAVISRATKQKPVLRQIKFLKDGKNGKASQEHYSRGVAFVEFSEHQHALVALRVL 182
            KKLCIDAV SRATKQKP+++QIKFLKD K GK   +++SRGVAF+EF+EHQHALVALRVL
Sbjct: 680  KKLCIDAVTSRATKQKPMIKQIKFLKDMKKGKVVTKNHSRGVAFIEFTEHQHALVALRVL 739

Query: 183  NNNPETFGPEHRPIVEFALDNVQTLKLRKAKQQSWQQ--------QAPHDDNNSEENDKP 338
            NNNPETFGPEHRPIVEFALDN+QTL+ R+AK +++QQ          P+DD N+ E    
Sbjct: 740  NNNPETFGPEHRPIVEFALDNIQTLRQRRAKLEAYQQINHGYPEDLQPNDDPNTPEASPN 799

Query: 339  SKAGVHSHAIKDRKRKSQEHDNPAKDSVQNTNGELGGKVANGKSPQGH-KSKRQKGNNNK 515
             K       +K RKRKS+++D P K S  N   E   KV  G     H  +K+ K N  K
Sbjct: 800  KK-------MKSRKRKSRDNDGPLKTSEPNEGDEPEDKVIKGAVIDRHGAAKKHKINPAK 852

Query: 516  TTSSEVSSLKDNPKALSMKSKNNQDGQNPSGTLLEAQNTAIDTNRKKSGNKDDVGYRKRK 695
                +     +N   +        D + P    L+A++T       KS  + ++  +KRK
Sbjct: 853  EKQKDKRKKLNNSHGI-----GKPDDEKP----LKAESTISKARNSKSSEESNMLPKKRK 903

Query: 696  MQNQ--EEQGGEKVSRRRQKKKKEPAGKEVVDKLDMLIEQYRSKFSHKGSKGNDGEKQDS 869
            +Q     ++G     + R ++ K+P+G+ ++DKLDML+EQYR+KFS +     DG+KQ S
Sbjct: 904  LQEHIAVQEGKSPKQKTRTRRSKDPSGQVILDKLDMLVEQYRAKFSQQTDDKTDGQKQGS 963

Query: 870  KQLRRWFQS 896
            +QL+RWFQS
Sbjct: 964  RQLKRWFQS 972


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