BLASTX nr result

ID: Glycyrrhiza24_contig00008631 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00008631
         (800 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003539809.1| PREDICTED: probable ribosome biogenesis prot...   325   5e-87
ref|XP_003551069.1| PREDICTED: probable ribosome biogenesis prot...   321   1e-85
ref|NP_001236121.1| uncharacterized protein LOC100306000 [Glycin...   320   2e-85
ref|XP_003538140.1| PREDICTED: probable ribosome biogenesis prot...   318   9e-85
ref|XP_003535810.1| PREDICTED: LOW QUALITY PROTEIN: probable rib...   303   2e-80

>ref|XP_003539809.1| PREDICTED: probable ribosome biogenesis protein RLP24-like [Glycine
           max]
          Length = 168

 Score =  325 bits (834), Expect = 5e-87
 Identities = 154/168 (91%), Positives = 161/168 (95%)
 Frame = -3

Query: 663 MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRVHG 484
           MRLEKCWFCSST+YPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRVHG
Sbjct: 1   MRLEKCWFCSSTIYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRVHG 60

Query: 483 KDMTQDSTFEFERKRNRPERYDRNLAENVLKAIPKIDKIRVSREERHHKNRMKGKKQKVQ 304
           KDMTQDSTFEFERKRNRPERYDRNLAENVLKAIPKIDKIRV+REE+HHKNRMKGKKQK+Q
Sbjct: 61  KDMTQDSTFEFERKRNRPERYDRNLAENVLKAIPKIDKIRVTREEKHHKNRMKGKKQKLQ 120

Query: 303 MEAVKELQQGIDLVKAPSAFQKDPSLTLPKIKVGVSQQLSEENRSMEE 160
           MEA +EL+QGI LVKAPS  QKDPSLTLPKIKVGVSQQ SE+N  MEE
Sbjct: 121 MEAARELEQGISLVKAPSVLQKDPSLTLPKIKVGVSQQQSEDNHPMEE 168


>ref|XP_003551069.1| PREDICTED: probable ribosome biogenesis protein RLP24-like [Glycine
           max]
          Length = 168

 Score =  321 bits (822), Expect = 1e-85
 Identities = 154/168 (91%), Positives = 160/168 (95%)
 Frame = -3

Query: 663 MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRVHG 484
           MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRVHG
Sbjct: 1   MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRVHG 60

Query: 483 KDMTQDSTFEFERKRNRPERYDRNLAENVLKAIPKIDKIRVSREERHHKNRMKGKKQKVQ 304
           KDMTQDSTFEFERKRNRPERYDRNLAENVLKAIPKIDKIRV+REERHHKNRMKGKK+K+ 
Sbjct: 61  KDMTQDSTFEFERKRNRPERYDRNLAENVLKAIPKIDKIRVTREERHHKNRMKGKKEKLL 120

Query: 303 MEAVKELQQGIDLVKAPSAFQKDPSLTLPKIKVGVSQQLSEENRSMEE 160
            EAVKEL+QGI LVKAPS  Q+DPSLTLPKIKV VSQQ SEEN +MEE
Sbjct: 121 KEAVKELEQGISLVKAPSVLQQDPSLTLPKIKVKVSQQQSEENHAMEE 168


>ref|NP_001236121.1| uncharacterized protein LOC100306000 [Glycine max]
           gi|255627233|gb|ACU13961.1| unknown [Glycine max]
          Length = 168

 Score =  320 bits (820), Expect = 2e-85
 Identities = 153/168 (91%), Positives = 159/168 (94%)
 Frame = -3

Query: 663 MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRVHG 484
           MRLEKCWFCSST+YPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRVHG
Sbjct: 1   MRLEKCWFCSSTIYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRVHG 60

Query: 483 KDMTQDSTFEFERKRNRPERYDRNLAENVLKAIPKIDKIRVSREERHHKNRMKGKKQKVQ 304
           KDMTQDSTFEFERKRNRPERYDRNLAENVLK IPKIDKIRVSREERHHKNRMKGKK+K+ 
Sbjct: 61  KDMTQDSTFEFERKRNRPERYDRNLAENVLKVIPKIDKIRVSREERHHKNRMKGKKEKLL 120

Query: 303 MEAVKELQQGIDLVKAPSAFQKDPSLTLPKIKVGVSQQLSEENRSMEE 160
            EAVKEL+QGI LVKAPS  Q+DPSLTLPKIKV VSQQ SEEN +MEE
Sbjct: 121 KEAVKELEQGISLVKAPSVLQQDPSLTLPKIKVKVSQQQSEENHAMEE 168


>ref|XP_003538140.1| PREDICTED: probable ribosome biogenesis protein RLP24-like [Glycine
           max]
          Length = 169

 Score =  318 bits (815), Expect = 9e-85
 Identities = 154/169 (91%), Positives = 159/169 (94%), Gaps = 1/169 (0%)
 Frame = -3

Query: 663 MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRVHG 484
           MRLEKCWFCSST YPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRVHG
Sbjct: 1   MRLEKCWFCSSTTYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRVHG 60

Query: 483 KDMTQDSTFEFERKRNRPERYDRNLAENVLKAIPKIDKIRVSREERHHKNRMKGKKQKVQ 304
           KDMTQDSTFEFERKRNRPERYDRNLAENVLKAIPKIDKIRV+REE+HHKNRMKGKKQK+ 
Sbjct: 61  KDMTQDSTFEFERKRNRPERYDRNLAENVLKAIPKIDKIRVAREEKHHKNRMKGKKQKLH 120

Query: 303 MEAVKELQQGIDLVKAPSAFQKDPSLTLPKIKVGVS-QQLSEENRSMEE 160
           MEAV+EL+QGI LVKAPS  QKDP LTLPKIKVGVS QQ SEEN  MEE
Sbjct: 121 MEAVRELEQGISLVKAPSVLQKDPFLTLPKIKVGVSQQQQSEENHPMEE 169


>ref|XP_003535810.1| PREDICTED: LOW QUALITY PROTEIN: probable ribosome biogenesis
           protein RLP24-like [Glycine max]
          Length = 174

 Score =  303 bits (777), Expect = 2e-80
 Identities = 149/174 (85%), Positives = 156/174 (89%), Gaps = 6/174 (3%)
 Frame = -3

Query: 663 MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRVHG 484
           MRLEKCWFCSST+YPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYR VHG
Sbjct: 1   MRLEKCWFCSSTIYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRXVHG 60

Query: 483 KDMTQDSTFEFERKRNRPERYDRNLAENVLKAIPKIDKIRVSREERHHKNR------MKG 322
           KDMTQDSTFEFERKRNRPERYDRNLAENVLKAIPKIDKIRVSREERHHKN+      MKG
Sbjct: 61  KDMTQDSTFEFERKRNRPERYDRNLAENVLKAIPKIDKIRVSREERHHKNKSFLTXLMKG 120

Query: 321 KKQKVQMEAVKELQQGIDLVKAPSAFQKDPSLTLPKIKVGVSQQLSEENRSMEE 160
           KK+K+  EAVKEL+ GI LVKA    Q+DPSLTLPKIKV VSQQ SEEN +MEE
Sbjct: 121 KKEKLLKEAVKELEXGISLVKARYVLQQDPSLTLPKIKVKVSQQQSEENHAMEE 174


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