BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00008618
         (1644 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003548152.1| PREDICTED: pentatricopeptide repeat-containi...   452   e-124
ref|XP_003533975.1| PREDICTED: pentatricopeptide repeat-containi...   452   e-124
gb|ACU23645.1| unknown [Glycine max]                                  449   e-124
ref|XP_002274318.1| PREDICTED: pentatricopeptide repeat-containi...   350   6e-94
ref|XP_004140747.1| PREDICTED: pentatricopeptide repeat-containi...   339   1e-90

>ref|XP_003548152.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21190-like
            [Glycine max]
          Length = 343

 Score =  452 bits (1163), Expect = e-124
 Identities = 229/340 (67%), Positives = 262/340 (77%), Gaps = 35/340 (10%)
 Frame = -3

Query: 1438 TNSPLLIAKTFEEIKVPTSTRSTVVCAAKGPRPRYPRVWKTNKKIGTISKAAKLVQSIKE 1259
            T+SPLLIAKTFE IK+PTSTR TV+CAAKG RPRYPRVWKT+KKIGTISKAAKLV SIKE
Sbjct: 5    TDSPLLIAKTFEAIKIPTSTRGTVLCAAKGQRPRYPRVWKTHKKIGTISKAAKLVNSIKE 64

Query: 1258 LSNVKEEVYGALDSYVAWELEFPLITVKKALKTLEYEQEWKRIIQVTKWMLSKGQGKTMG 1079
            LSNVKEEVYGALDSYVAWELEFPLITVKKALKTLE EQEWKR+IQVTKWMLSKGQGKTMG
Sbjct: 65   LSNVKEEVYGALDSYVAWELEFPLITVKKALKTLESEQEWKRVIQVTKWMLSKGQGKTMG 124

Query: 1078 SYFTXXXXXXXXXXXXXXXXLWTKLLMQYMEGLPRRFFDKMVSIYRKKGMHEKMFEVFAD 899
            SYFT                LWTKLLMQYME LPRRFFDKM+SIY K+GMHEKMFE+FAD
Sbjct: 125  SYFTLLNALVEDDRLDEAEELWTKLLMQYMESLPRRFFDKMISIYHKRGMHEKMFEIFAD 184

Query: 898  MEELGVRPSISIVSTVGDVFKELGMMDKYEKLHRKYPPPKWEYRYIKGKRVRIKVQGQPN 719
            MEEL +RP+I++VS +GD FKELGM+DKY+KLH KYPPP+WEYRYI+GKRV++KV+ Q N
Sbjct: 185  MEELCLRPNIAVVSMIGDAFKELGMLDKYQKLHAKYPPPQWEYRYIRGKRVKVKVEVQSN 244

Query: 718  QVNKYIEKHGNFQPN-----------------------------------SGLNEDDRSE 644
            QVN YIE+HGN +PN                                   SG+N + RSE
Sbjct: 245  QVNTYIERHGNVEPNSDLNKNYRLSEKTSEIVDQQLRQDANVISMKPEQISGINNNYRSE 304

Query: 643  ETSEVIDDEQFNQDDANATCMEPEQISDESNESTEPVLDV 524
            ETS++IDD+Q  Q +A+   ME EQISD+S +S EP+ +V
Sbjct: 305  ETSDMIDDQQLGQ-EADVISMELEQISDDSYDSMEPIFNV 343


>ref|XP_003533975.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21190-like
            [Glycine max]
          Length = 343

 Score =  452 bits (1162), Expect = e-124
 Identities = 229/340 (67%), Positives = 262/340 (77%), Gaps = 35/340 (10%)
 Frame = -3

Query: 1438 TNSPLLIAKTFEEIKVPTSTRSTVVCAAKGPRPRYPRVWKTNKKIGTISKAAKLVQSIKE 1259
            T+SPLLIAKTFE  K+PTSTR TVVCAAKGPRPRYPRVWKT+KKIGTISKAAKLV+SIKE
Sbjct: 5    TDSPLLIAKTFEATKIPTSTRGTVVCAAKGPRPRYPRVWKTHKKIGTISKAAKLVKSIKE 64

Query: 1258 LSNVKEEVYGALDSYVAWELEFPLITVKKALKTLEYEQEWKRIIQVTKWMLSKGQGKTMG 1079
            LSNVKEEVYGALDSYVAWELEFPLITVKKALKTLE+EQ+WKR+IQ+TKWMLSKGQGKTMG
Sbjct: 65   LSNVKEEVYGALDSYVAWELEFPLITVKKALKTLEFEQDWKRVIQITKWMLSKGQGKTMG 124

Query: 1078 SYFTXXXXXXXXXXXXXXXXLWTKLLMQYMEGLPRRFFDKMVSIYRKKGMHEKMFEVFAD 899
            SYFT                LWTKLLMQYME LPRRFFDKM+SIY K+GMHEKMFE+FAD
Sbjct: 125  SYFTLLNALVEDDRLDEAEELWTKLLMQYMESLPRRFFDKMISIYHKRGMHEKMFEIFAD 184

Query: 898  MEELGVRPSISIVSTVGDVFKELGMMDKYEKLHRKYPPPKWEYRYIKGKRVRIKVQGQPN 719
            MEEL +RP+I +VS +GD FKE GM+DKY KLH KYPPP+WEYRYI+GKRV++KV+ Q +
Sbjct: 185  MEELCLRPNIVVVSMIGDAFKERGMLDKYLKLHAKYPPPQWEYRYIRGKRVKVKVEVQSS 244

Query: 718  QVNKYIEKHGNFQPNSGLNED-----------------------------------DRSE 644
            QVN YIE+HGN +PNS LN+D                                    RSE
Sbjct: 245  QVNTYIERHGNVEPNSDLNKDYRSSEKTSETVDQQLRQDADVISMEPERISDINNNYRSE 304

Query: 643  ETSEVIDDEQFNQDDANATCMEPEQISDESNESTEPVLDV 524
            ETS++IDD+Q  Q +A+   ME EQISD+S +S EP+LDV
Sbjct: 305  ETSDMIDDQQLGQ-EADVISMELEQISDDSYDSIEPILDV 343


>gb|ACU23645.1| unknown [Glycine max]
          Length = 343

 Score =  449 bits (1156), Expect = e-124
 Identities = 228/340 (67%), Positives = 261/340 (76%), Gaps = 35/340 (10%)
 Frame = -3

Query: 1438 TNSPLLIAKTFEEIKVPTSTRSTVVCAAKGPRPRYPRVWKTNKKIGTISKAAKLVQSIKE 1259
            T+SPLLIAKTFE  K+PTSTR TVVCAAKGPRPRYPRVWKT+KKIGTISKAAKLV+SIKE
Sbjct: 5    TDSPLLIAKTFEATKIPTSTRGTVVCAAKGPRPRYPRVWKTHKKIGTISKAAKLVKSIKE 64

Query: 1258 LSNVKEEVYGALDSYVAWELEFPLITVKKALKTLEYEQEWKRIIQVTKWMLSKGQGKTMG 1079
            LSNVKEEVYGALDSYVAWELEFPLITVKKALKTLE+EQ+WKR+IQ+TKWMLSKGQGKTMG
Sbjct: 65   LSNVKEEVYGALDSYVAWELEFPLITVKKALKTLEFEQDWKRVIQITKWMLSKGQGKTMG 124

Query: 1078 SYFTXXXXXXXXXXXXXXXXLWTKLLMQYMEGLPRRFFDKMVSIYRKKGMHEKMFEVFAD 899
            SYFT                LWTKLLMQYME LPRRFFDKM+SIY K+GMHEKMFE+FAD
Sbjct: 125  SYFTLLNALVEDDRLDEAEELWTKLLMQYMESLPRRFFDKMISIYHKRGMHEKMFEIFAD 184

Query: 898  MEELGVRPSISIVSTVGDVFKELGMMDKYEKLHRKYPPPKWEYRYIKGKRVRIKVQGQPN 719
            MEEL +RP+I +VS +GD FKE G +DKY KLH KYPPP+WEYRYI+GKRV++KV+ Q +
Sbjct: 185  MEELCLRPNIVVVSMIGDAFKERGTLDKYLKLHAKYPPPQWEYRYIRGKRVKVKVEVQSS 244

Query: 718  QVNKYIEKHGNFQPNSGLNED-----------------------------------DRSE 644
            QVN YIE+HGN +PNS LN+D                                    RSE
Sbjct: 245  QVNTYIERHGNVEPNSDLNKDYRSSEKTSETVDQQLRQDADVISMEPERISDINNNYRSE 304

Query: 643  ETSEVIDDEQFNQDDANATCMEPEQISDESNESTEPVLDV 524
            ETS++IDD+Q  Q +A+   ME EQISD+S +S EP+LDV
Sbjct: 305  ETSDMIDDQQLGQ-EADVISMELEQISDDSYDSIEPILDV 343


>ref|XP_002274318.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21190
            [Vitis vinifera] gi|302143769|emb|CBI22630.3| unnamed
            protein product [Vitis vinifera]
          Length = 295

 Score =  350 bits (898), Expect = 6e-94
 Identities = 176/293 (60%), Positives = 218/293 (74%), Gaps = 3/293 (1%)
 Frame = -3

Query: 1432 SPLLIAKTFEEIKVPTSTRSTVVCAAKGPRPRYPRVWKTNKKIGTISKAAKLVQSIKELS 1253
            SP  I +  + +++P + RS VVC AKGPRPRYPRVWKT ++IGTISK+AKLV  IK LS
Sbjct: 7    SPATITRRLDAVEIPKNPRSIVVCGAKGPRPRYPRVWKTRQRIGTISKSAKLVDCIKGLS 66

Query: 1252 NVKEEVYGALDSYVAWELEFPLITVKKALKTLEYEQEWKRIIQVTKWMLSKGQGKTMGSY 1073
            NVKEEVYGALDS++AWELEFPLITVKKALKTLE ++EWKRIIQVTKWMLSKGQG+TMGSY
Sbjct: 67   NVKEEVYGALDSFIAWELEFPLITVKKALKTLEDQKEWKRIIQVTKWMLSKGQGRTMGSY 126

Query: 1072 FTXXXXXXXXXXXXXXXXLWTKLLMQYMEGLPRRFFDKMVSIYRKKGMHEKMFEVFADME 893
            FT                LWTKL  + +E LPR F+DKM+SIY ++ MHEKMFE+FADME
Sbjct: 127  FTLLNALAEDGRLDEAEELWTKLFSENLESLPRVFYDKMISIYYRRDMHEKMFEIFADME 186

Query: 892  ELGVRPSISIVSTVGDVFKELGMMDKYEKLHRKYPPPKWEYRYIKGKRVRI--KVQGQPN 719
            ELG+RP+ SIV  VGDVF++LGM+DKYEKL +KYPPPKWEYRYIKGKRVRI  K+ G+ +
Sbjct: 187  ELGIRPNTSIVKMVGDVFQKLGMLDKYEKLQKKYPPPKWEYRYIKGKRVRIRAKLTGESD 246

Query: 718  QVNKYIEKHGNFQPNSGLNE-DDRSEETSEVIDDEQFNQDDANATCMEPEQIS 563
                   +  +  P   +NE +D++E ++E+ D+   + DDA+    E    S
Sbjct: 247  DPG----EAESDDPGEAVNEINDKTENSNEMHDEADSSVDDADEPIYEAHNSS 295


>ref|XP_004140747.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21190-like
            [Cucumis sativus]
          Length = 331

 Score =  339 bits (870), Expect = 1e-90
 Identities = 171/294 (58%), Positives = 219/294 (74%), Gaps = 1/294 (0%)
 Frame = -3

Query: 1417 AKTFEEIKVPTSTRSTVVCAAKGPRPRYPRVWKTNKKIGTISKAAKLVQSIKELSNVKEE 1238
            +K  E +       S+VVCAAKGPRPRYPRVWKT K+IGTISKAAKLV  +K LSNVKEE
Sbjct: 30   SKRIESVNFSWCPSSSVVCAAKGPRPRYPRVWKTKKRIGTISKAAKLVDCVKGLSNVKEE 89

Query: 1237 VYGALDSYVAWELEFPLITVKKALKTLEYEQEWKRIIQVTKWMLSKGQGKTMGSYFTXXX 1058
            VYGALDS++AWELEFPLITVKKALKTLE ++EWKRIIQ+TKWMLSKGQG+TMGSYFT   
Sbjct: 90   VYGALDSFIAWELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLN 149

Query: 1057 XXXXXXXXXXXXXLWTKLLMQYMEGLPRRFFDKMVSIYRKKGMHEKMFEVFADMEELGVR 878
                         LW KL  Q++E +PR FF KM+S+Y  + MH+K+FEVFADMEELGV+
Sbjct: 150  ALAEDGRLDEAEELWNKLFSQHLESIPRIFFHKMISLYYDQAMHDKLFEVFADMEELGVQ 209

Query: 877  PSISIVSTVGDVFKELGMMDKYEKLHRKYPPPKWEYRYIKGKRVRIKVQGQPNQVNKYIE 698
            P+++IV+ VG+VF+ELGM+DKY+KL +KYPPPKWEYRYIKGKRV+I+         KY+ 
Sbjct: 210  PNMAIVTKVGNVFQELGMLDKYKKLMKKYPPPKWEYRYIKGKRVKIRA--------KYLS 261

Query: 697  KHGNFQPNSGLNEDDRSEETS-EVIDDEQFNQDDANATCMEPEQISDESNESTE 539
            ++GN   N+GL+E  + E +S   ID+ +   +D++    + E +S++ +E  E
Sbjct: 262  ENGN--SNNGLSEHAKMEHSSTNSIDEAEITSEDSSLE--DDEDMSEDPDEILE 311