BLASTX nr result

ID: Glycyrrhiza24_contig00008598 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00008598
         (2172 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003522417.1| PREDICTED: zinc finger CCCH domain-containin...   604   e-170
ref|XP_003638527.1| Zinc finger CCCH domain-containing protein [...   586   e-164
ref|XP_003525622.1| PREDICTED: zinc finger CCCH domain-containin...   572   e-160
ref|XP_003549835.1| PREDICTED: zinc finger CCCH domain-containin...   563   e-158
ref|XP_003608904.1| Zinc finger CCCH domain-containing protein [...   527   e-147

>ref|XP_003522417.1| PREDICTED: zinc finger CCCH domain-containing protein 43-like
            [Glycine max]
          Length = 570

 Score =  604 bits (1558), Expect = e-170
 Identities = 294/389 (75%), Positives = 312/389 (80%), Gaps = 3/389 (0%)
 Frame = -3

Query: 1489 DGWNGG-DEGCNWTENVN--ESGSDKVGGDVDEVENKDERSSDRAQQYPLRPEAEDCAFY 1319
            DGWNGG DEGC+  ENVN  ES SDKVGGDV+ V  K ERSS RAQQYPLRPEAEDCAFY
Sbjct: 185  DGWNGGGDEGCDCIENVNVNESESDKVGGDVEGV--KGERSSGRAQQYPLRPEAEDCAFY 242

Query: 1318 LKTGTCKFGFNCRFNHPVRWKNQAVKEKVGERDELEERSDQTECKYYSRSGGCKFGKACK 1139
            LKTGTCKFGFNC+FNHP+R KNQA KE  GER+E  ERS Q ECKYY RSGGCKFGKACK
Sbjct: 243  LKTGTCKFGFNCKFNHPLRRKNQAKKENAGEREEQAERSGQMECKYYLRSGGCKFGKACK 302

Query: 1138 FNHTRGKCSAAPVLELNFLGLPIRVGGKECPYYMRTGSCKFGANCKFNHPDPTTVXXXXX 959
            FNHTRGK S+A   ELNFLGLPIRVG KEC YYMRTGSCKFGANC+FNHPDPTTV     
Sbjct: 303  FNHTRGKSSSASATELNFLGLPIRVGEKECLYYMRTGSCKFGANCRFNHPDPTTVGGGDS 362

Query: 958  XXXXXXXXXXXXXXXXXXSIPSWSSTRTLNETAPFVPIIISPTSGVSPQSSEWNGYQAPV 779
                              SI SWSSTR LNE+APFVP+I+SP  GVSPQSSEWNGYQAPV
Sbjct: 363  PSGYGNGSSISLQGVSQSSISSWSSTRPLNESAPFVPVILSPNPGVSPQSSEWNGYQAPV 422

Query: 778  YLSERSMQPPSTYVVNNPVIETNVYMHHQNQMPVEEFPERPGQPECSYFLKTGDCKFKSN 599
            YLSERS+ PPSTYV+NNP +E+NVYMHHQ QM VEEFPERPG+PECSYFLKTGDCKFKSN
Sbjct: 423  YLSERSLHPPSTYVMNNPAMESNVYMHHQKQMLVEEFPERPGEPECSYFLKTGDCKFKSN 482

Query: 598  CKFHHPKNRITRLPPCNLSDKGLPLRPDQNVCMHYSRYGICKFGPACKFDHPINPPPSAM 419
            CKFHHPKNRI RLP CNLSDKGLPLRPDQNVC +Y RYGICKFGPACKFDH   P PS M
Sbjct: 483  CKFHHPKNRIARLPLCNLSDKGLPLRPDQNVCTYYRRYGICKFGPACKFDH---PAPSTM 539

Query: 418  PGLDQQSSYTNSASVDVVGSGGANGATIQ 332
             G DQQS+Y NSA VDV  +GGA     Q
Sbjct: 540  AGHDQQSTYINSAGVDVAENGGAEDGNQQ 568



 Score = 75.5 bits (184), Expect = 6e-11
 Identities = 41/64 (64%), Positives = 44/64 (68%), Gaps = 3/64 (4%)
 Frame = -2

Query: 1865 KDPQLG---SQGEPHSPDPQAPDPNHVTQVDDALGGELQNKLDLKDGDETENKGSNFEVG 1695
            KDP LG   S   P   DPQ  D NHVT VDDALG ELQ KLDLKD  E++NKGSN E G
Sbjct: 14   KDPLLGEPSSSVHPLDHDPQPSDLNHVTPVDDALGEELQGKLDLKDEGESDNKGSNLEDG 73

Query: 1694 GEEL 1683
            GE+L
Sbjct: 74   GEKL 77


>ref|XP_003638527.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
            gi|355504462|gb|AES85665.1| Zinc finger CCCH
            domain-containing protein [Medicago truncatula]
          Length = 511

 Score =  586 bits (1510), Expect = e-164
 Identities = 275/385 (71%), Positives = 303/385 (78%)
 Frame = -3

Query: 1489 DGWNGGDEGCNWTENVNESGSDKVGGDVDEVENKDERSSDRAQQYPLRPEAEDCAFYLKT 1310
            DGWNG  +G N    V++   ++V GDVDE      RS+  A+QYPLRPEAEDC+FYLKT
Sbjct: 133  DGWNGDYDGWNDDNEVSDWIENEVSGDVDE------RSNGGAEQYPLRPEAEDCSFYLKT 186

Query: 1309 GTCKFGFNCRFNHPVRWKNQAVKEKVGERDELEERSDQTECKYYSRSGGCKFGKACKFNH 1130
            GTCKFGFNC+FNHP+  +NQ  +E+ GERDELEERS QTECKYYSRSGGCKFGK CKF+H
Sbjct: 187  GTCKFGFNCKFNHPLGRRNQVFRERAGERDELEERSSQTECKYYSRSGGCKFGKDCKFDH 246

Query: 1129 TRGKCSAAPVLELNFLGLPIRVGGKECPYYMRTGSCKFGANCKFNHPDPTTVXXXXXXXX 950
            TRGK SA  VLELNFLGLPIR+G KECPYYMRTGSCKFGANCKFNHPDPT+V        
Sbjct: 247  TRGKFSADQVLELNFLGLPIRLGEKECPYYMRTGSCKFGANCKFNHPDPTSVGGYDSTAG 306

Query: 949  XXXXXXXXXXXXXXXSIPSWSSTRTLNETAPFVPIIISPTSGVSPQSSEWNGYQAPVYLS 770
                           S P WSSTR  NETAPFVPIIISPT G SP+SS+WNGYQAP YLS
Sbjct: 307  YGNGSTTSLQDVSQSSTPPWSSTRKFNETAPFVPIIISPTPGASPRSSDWNGYQAPFYLS 366

Query: 769  ERSMQPPSTYVVNNPVIETNVYMHHQNQMPVEEFPERPGQPECSYFLKTGDCKFKSNCKF 590
            ERSM PPS Y VNNP +E N YMH     PVEEFPERPG+PECS+FLKTGDCKFKS+CKF
Sbjct: 367  ERSMHPPSPYAVNNPAMEMNAYMHRHKHTPVEEFPERPGEPECSFFLKTGDCKFKSHCKF 426

Query: 589  HHPKNRITRLPPCNLSDKGLPLRPDQNVCMHYSRYGICKFGPACKFDHPINPPPSAMPGL 410
            HHPKNRIT+LPPCNLSDKGLPLRP QNVC HYSRYGICKFGPACK+DHPIN PP  MPG 
Sbjct: 427  HHPKNRITKLPPCNLSDKGLPLRPGQNVCTHYSRYGICKFGPACKYDHPINLPPPTMPGR 486

Query: 409  DQQSSYTNSASVDVVGSGGANGATI 335
             QQSS+TNSAS++  GS GA+ ATI
Sbjct: 487  YQQSSHTNSASIEEAGSAGASDATI 511


>ref|XP_003525622.1| PREDICTED: zinc finger CCCH domain-containing protein 43-like
            [Glycine max]
          Length = 490

 Score =  572 bits (1473), Expect = e-160
 Identities = 273/401 (68%), Positives = 307/401 (76%), Gaps = 17/401 (4%)
 Frame = -3

Query: 1489 DGWNGGDEGCNWTENV----------NESGSDKVGGDVD---EVENKDERSSDRAQQYPL 1349
            DG + G E  +W E V          +  G D V GDVD   EVE K+ R+S     YPL
Sbjct: 83   DGDSKGWETNSWNEEVGVDVDVDGDGDGDGDDDVDGDVDGDDEVEKKEGRNSGGTHHYPL 142

Query: 1348 RPEAEDCAFYLKTGTCKFGFNCRFNHPVRWKNQAVKEKVGERDELEERSDQTECKYYSRS 1169
            RPEAEDCAFY+KTG CKFGFNC+FNHP++ K+QAVKEK GER+E  ERS  TECKYY RS
Sbjct: 143  RPEAEDCAFYMKTGNCKFGFNCKFNHPIKRKSQAVKEKAGEREETTERSGMTECKYYQRS 202

Query: 1168 GGCKFGKACKFNHTRGKCSAAP--VLELNFLGLPIRVGGKECPYYMRTGSCKFGANCKFN 995
            GGCKFGK+CK+NHTRGK S AP  +LELNFLGLPIR G +ECPYYMRTGSCKFGANCKFN
Sbjct: 203  GGCKFGKSCKYNHTRGKISTAPAPLLELNFLGLPIRPGERECPYYMRTGSCKFGANCKFN 262

Query: 994  HPDPTTVXXXXXXXXXXXXXXXXXXXXXXXS--IPSWSSTRTLNETAPFVPIIISPTSGV 821
            HPDPT V                          +PSWSS RTLNE +PFVP+++SPT GV
Sbjct: 263  HPDPTAVGGGGGNPPSGYGNGGSISLQGVSQTSVPSWSSPRTLNEASPFVPMMLSPTQGV 322

Query: 820  SPQSSEWNGYQAPVYLSERSMQPPSTYVVNNPVIETNVYMHHQNQMPVEEFPERPGQPEC 641
            S QSS+WNGYQA VYL ERS+ PPST+V+NNP I+TNVYMHHQ QMPV+EFPERPG+PEC
Sbjct: 323  STQSSDWNGYQASVYLPERSIHPPSTFVMNNPAIDTNVYMHHQKQMPVDEFPERPGEPEC 382

Query: 640  SYFLKTGDCKFKSNCKFHHPKNRITRLPPCNLSDKGLPLRPDQNVCMHYSRYGICKFGPA 461
            S+FLKTGDCKFKSNCKFHHPKNR+TRLPPCNLSDKGLPLRPDQ+VC HYSRYGICKFGPA
Sbjct: 383  SFFLKTGDCKFKSNCKFHHPKNRVTRLPPCNLSDKGLPLRPDQSVCSHYSRYGICKFGPA 442

Query: 460  CKFDHPINPPPSAMPGLDQQSSYTNSASVDVVGSGGANGAT 338
            CKFDHPIN  P  +PGL+QQ SY+NSAS  V G GG+ G T
Sbjct: 443  CKFDHPINLQPVMIPGLEQQ-SYSNSASAGVAGIGGSTGVT 482


>ref|XP_003549835.1| PREDICTED: zinc finger CCCH domain-containing protein 43-like
            [Glycine max]
          Length = 501

 Score =  563 bits (1452), Expect = e-158
 Identities = 269/381 (70%), Positives = 304/381 (79%), Gaps = 9/381 (2%)
 Frame = -3

Query: 1447 NVNESGSDKVGGDVD-EVENKDERSSDRAQQYPLRPEAEDCAFYLKTGTCKFGFNCRFNH 1271
            +V++ G   V  DVD EVE K+  +S  AQ YPLRPEAEDCAFY+KTG CKFGFNC+FNH
Sbjct: 119  DVHDVGDGDVDVDVDDEVEKKEGGNSGLAQHYPLRPEAEDCAFYIKTGNCKFGFNCKFNH 178

Query: 1270 PVRWKNQAVKEKVGERDELEERSDQTECKYYSRSGGCKFGKACKFNHTRGKCSAAP--VL 1097
            P+R K+QAVKEK GER+E  ERS  TECKYY RSGGCKFGK+CK+NHTRGK S AP  +L
Sbjct: 179  PIRRKSQAVKEKAGEREETTERSGMTECKYYQRSGGCKFGKSCKYNHTRGKISTAPAPLL 238

Query: 1096 ELNFLGLPIRVGGKECPYYMRTGSCKFGANCKFNHPDPTTVXXXXXXXXXXXXXXXXXXX 917
            ELNFLGLPIR+G +ECPYYMRTGSCKFGANCKFNHPDPT V                   
Sbjct: 239  ELNFLGLPIRLGERECPYYMRTGSCKFGANCKFNHPDPTAVGGVGGDPASGYGNGGSISL 298

Query: 916  XXXXS--IPSWSSTRTLNETAPFVPIIISPTSGVSPQSSEWNGYQAPVYLSERSMQPPST 743
                   +PSWSS RTLNE++PFVP+++SPT GVS QSS+WNGYQA VYL ER+M PPST
Sbjct: 299  QGVSQTSVPSWSSPRTLNESSPFVPMMLSPTQGVSTQSSDWNGYQASVYLPERNMHPPST 358

Query: 742  YVVNNPVIETNVYMHHQNQMPVEEFPERPGQPECSYFLKTGDCKFKSNCKFHHPKNRITR 563
            +V+NNP I+TNVYMHHQ QMPV+EFPERPG+PECSYFLKTGDCKFKSNCKF+HPKNR+ R
Sbjct: 359  FVMNNPAIDTNVYMHHQKQMPVDEFPERPGEPECSYFLKTGDCKFKSNCKFNHPKNRVAR 418

Query: 562  LPPCNLSDKGLPLRPDQNVCMHYSRYGICKFGPACKFDHPINPPPSAMPGLDQQSSYTNS 383
            LPPCNLSDKGLPLRPDQ+VC HYSRYGICKFGPACKFDHPIN  P  +PGL QQ SY+NS
Sbjct: 419  LPPCNLSDKGLPLRPDQSVCSHYSRYGICKFGPACKFDHPINLQPVMIPGLGQQ-SYSNS 477

Query: 382  ASVDVVGSGGANG----ATIQ 332
            ASV+V G  G+ G    ATIQ
Sbjct: 478  ASVEVAGIFGSTGVVTDATIQ 498


>ref|XP_003608904.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
            gi|355509959|gb|AES91101.1| Zinc finger CCCH
            domain-containing protein [Medicago truncatula]
          Length = 573

 Score =  527 bits (1358), Expect = e-147
 Identities = 253/387 (65%), Positives = 294/387 (75%), Gaps = 4/387 (1%)
 Frame = -3

Query: 1480 NGGDEGCNWTENVNESGSDKVG-GDVDEVENKDERSSDRAQQYPLRPEAEDCAFYLKTGT 1304
            NGG  G  +     +   D  G GD      K+E+SSD   Q+PLRPEAEDC+FY+KTG+
Sbjct: 194  NGGGAGYGYGAGYGDGYGDGYGYGD-----EKEEKSSDGTHQFPLRPEAEDCSFYMKTGS 248

Query: 1303 CKFGFNCRFNHPVRWKNQ--AVKEKVGERDELEERSDQTECKYYSRSGGCKFGKACKFNH 1130
            CKFGFNC+FNHP+R KNQ  AV+EKV ER+E EE + QTECKYY RSGGCKFGKACK+NH
Sbjct: 249  CKFGFNCKFNHPIRRKNQNQAVREKVREREEPEENAGQTECKYYQRSGGCKFGKACKYNH 308

Query: 1129 TRGKCSAAPVLELNFLGLPIRVGGKECPYYMRTGSCKFGANCKFNHPDPTTVXXXXXXXX 950
            +RG    AP+ ELNFLGLPIR+G +ECPYYMRTGSCKFG+NC+FNHPDPTTV        
Sbjct: 309  SRG--FTAPISELNFLGLPIRLGERECPYYMRTGSCKFGSNCRFNHPDPTTVGGSDPQSG 366

Query: 949  XXXXXXXXXXXXXXXSIPSWSSTRTLNETAPFVPIIISPTSGVSPQSSEWNGYQAPVYLS 770
                            + SWSS R LNET PF P++ +PT G++PQ+S+WNGYQAP YLS
Sbjct: 367  YGNGGSVSLRGVSQQPVASWSS-RKLNET-PFAPLMPTPTQGLAPQTSDWNGYQAPAYLS 424

Query: 769  ERSMQPPSTYVVNNPVIETNVYMHHQNQMPVEEFPERPGQPECSYFLKTGDCKFKSNCKF 590
            ER M P STYV+NNP I+TNVYMHHQ QMP E FPERPG+PECS+F+KTGDCKFKSNCKF
Sbjct: 425  ERIMHPSSTYVMNNPTIDTNVYMHHQKQMPFEVFPERPGEPECSFFIKTGDCKFKSNCKF 484

Query: 589  HHPKNRITRLPPCNLSDKGLPLRPDQNVCMHYSRYGICKFGPACKFDHPINPPPSAMPGL 410
            HHPKNR+ +LPPCNLSDKGLPLRPDQ+VC HYSRYGICKFGPAC+FDHP +  P  MPGL
Sbjct: 485  HHPKNRVAKLPPCNLSDKGLPLRPDQSVCSHYSRYGICKFGPACRFDHPESALPLMMPGL 544

Query: 409  DQQSSYTNSASVDVVGSGG-ANGATIQ 332
             QQ S+ NSA+  V G GG A+ ATIQ
Sbjct: 545  GQQ-SFANSANAQVAGMGGSASDATIQ 570


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