BLASTX nr result

ID: Glycyrrhiza24_contig00008518 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00008518
         (1225 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001240135.1| uncharacterized protein LOC100818781 [Glycin...   479   e-133
ref|XP_003536809.1| PREDICTED: zinc finger CCCH domain-containin...   477   e-132
ref|XP_002285629.1| PREDICTED: zinc finger CCCH domain-containin...   427   e-117
ref|XP_002299153.1| predicted protein [Populus trichocarpa] gi|2...   402   e-109
ref|XP_003592859.1| Zinc finger CCCH domain-containing protein [...   399   e-109

>ref|NP_001240135.1| uncharacterized protein LOC100818781 [Glycine max]
            gi|255636715|gb|ACU18693.1| unknown [Glycine max]
          Length = 297

 Score =  479 bits (1234), Expect = e-133
 Identities = 235/302 (77%), Positives = 250/302 (82%)
 Frame = -3

Query: 1112 MDRKRGRPDGPFNGNGGAKKFRPEMESFPTGLGSKSKPCTKFFSTSGCPFGEGCHFLHYV 933
            MDRKRGRP+  FN NGGAKK RPE +SFPTGLGSKSKPCTKFFSTSGCPFGEGCHFLHYV
Sbjct: 1    MDRKRGRPEAAFNFNGGAKKSRPETDSFPTGLGSKSKPCTKFFSTSGCPFGEGCHFLHYV 60

Query: 932  PGGVKAASQIINVGSNPAVPQMGRNQTVPPSFPDGSSPPVVKTRLCNKYNTAEGCKFGDK 753
            PGG KA SQ+INVGSNP  PQ+GRN  VPPSFPDGSSPPVVKTRLCNK+NTAEGCKFGDK
Sbjct: 61   PGGFKAVSQLINVGSNPVTPQVGRN-PVPPSFPDGSSPPVVKTRLCNKFNTAEGCKFGDK 119

Query: 752  CHFAHGEWELGRPNAPSYEDAXXXXXXXXXXXXXXXXXRIEXXXXXXXXXXXXXXXXXAK 573
            CHFAHGEWELGRP APSYED                  R+E                 AK
Sbjct: 120  CHFAHGEWELGRPTAPSYED----PRVLGQMPSSRVGGRVEPPHPAHGAAASFGASATAK 175

Query: 572  ISINASLAGAIIGKNGVNSKQICRITGAKLSIREHDSDPNLRNIELEGSFDQIKQASAMV 393
            ISINASLAGA+IGKNGVNSKQICR+TGAKLSIR+HD+DPNLRNIELEGSFDQIKQASAMV
Sbjct: 176  ISINASLAGAVIGKNGVNSKQICRVTGAKLSIRDHDTDPNLRNIELEGSFDQIKQASAMV 235

Query: 392  HDLILNVSSVSGPPMKNNTTQTSGPASNFKTKLCENFTKGSCTFGERCHFAHGTDELRRS 213
            H++ILNVSS SGPPMK+ T+QTS P SNFKTKLCENF KGSCTFGERCHFAHGTDELR+S
Sbjct: 236  HEVILNVSSASGPPMKSFTSQTSAPTSNFKTKLCENFAKGSCTFGERCHFAHGTDELRKS 295

Query: 212  GM 207
            GM
Sbjct: 296  GM 297


>ref|XP_003536809.1| PREDICTED: zinc finger CCCH domain-containing protein 14-like
            [Glycine max]
          Length = 297

 Score =  477 bits (1228), Expect = e-132
 Identities = 234/302 (77%), Positives = 250/302 (82%)
 Frame = -3

Query: 1112 MDRKRGRPDGPFNGNGGAKKFRPEMESFPTGLGSKSKPCTKFFSTSGCPFGEGCHFLHYV 933
            MDRKRGR +  FN NGGAKK RPEM+SFPTGLGSKSKPCTKFFSTSGCPFGEGCHFLHYV
Sbjct: 1    MDRKRGRHEAAFNFNGGAKKSRPEMDSFPTGLGSKSKPCTKFFSTSGCPFGEGCHFLHYV 60

Query: 932  PGGVKAASQIINVGSNPAVPQMGRNQTVPPSFPDGSSPPVVKTRLCNKYNTAEGCKFGDK 753
            PGG KA SQ+INVGSNP +PQ+GRN  VPPSFPDGSSPPVVKTRLCNK+NTAEGCKFGDK
Sbjct: 61   PGGFKAVSQLINVGSNPVIPQVGRN-PVPPSFPDGSSPPVVKTRLCNKFNTAEGCKFGDK 119

Query: 752  CHFAHGEWELGRPNAPSYEDAXXXXXXXXXXXXXXXXXRIEXXXXXXXXXXXXXXXXXAK 573
            CHFAHGEWELGRP APSYED                  R+E                 AK
Sbjct: 120  CHFAHGEWELGRPTAPSYED----PRVMGQMPSSRVGGRVEPPHPAHGAAASFGASATAK 175

Query: 572  ISINASLAGAIIGKNGVNSKQICRITGAKLSIREHDSDPNLRNIELEGSFDQIKQASAMV 393
            ISINASLAGA+IGKNGVNSKQICR+TGAKLSIR+HD+DPNLRNIELEGSFDQIKQASAMV
Sbjct: 176  ISINASLAGAVIGKNGVNSKQICRVTGAKLSIRDHDTDPNLRNIELEGSFDQIKQASAMV 235

Query: 392  HDLILNVSSVSGPPMKNNTTQTSGPASNFKTKLCENFTKGSCTFGERCHFAHGTDELRRS 213
            H++ILNVSS SGPPMK+ T+Q S PASNFKTKLCENF KGSCTFGERCHFAHG DELR+S
Sbjct: 236  HEVILNVSSASGPPMKSFTSQNSAPASNFKTKLCENFAKGSCTFGERCHFAHGNDELRKS 295

Query: 212  GM 207
            GM
Sbjct: 296  GM 297


>ref|XP_002285629.1| PREDICTED: zinc finger CCCH domain-containing protein 14-like [Vitis
            vinifera]
          Length = 301

 Score =  427 bits (1097), Expect = e-117
 Identities = 205/297 (69%), Positives = 232/297 (78%)
 Frame = -3

Query: 1106 RKRGRPDGPFNGNGGAKKFRPEMESFPTGLGSKSKPCTKFFSTSGCPFGEGCHFLHYVPG 927
            RKRGR +G  NGNGG KK + EMESF +G+GSKSKPCTKFFSTSGCPFGEGCHFLHYVPG
Sbjct: 7    RKRGRQEGTLNGNGGFKKSKQEMESFSSGIGSKSKPCTKFFSTSGCPFGEGCHFLHYVPG 66

Query: 926  GVKAASQIINVGSNPAVPQMGRNQTVPPSFPDGSSPPVVKTRLCNKYNTAEGCKFGDKCH 747
            G+KA SQ++N+G N  +    RN  VPPSFPDGSSPP VKTRLCNKYN+AEGCKFGDKCH
Sbjct: 67   GIKAVSQMVNLGGNTPLAPPARNPAVPPSFPDGSSPPAVKTRLCNKYNSAEGCKFGDKCH 126

Query: 746  FAHGEWELGRPNAPSYEDAXXXXXXXXXXXXXXXXXRIEXXXXXXXXXXXXXXXXXAKIS 567
            FAHGEWELG+P  PS+ +                  R+E                 AKIS
Sbjct: 127  FAHGEWELGKPTLPSHHE------DHRGMGSGRLAGRLEPPPPGLAAAASFGASATAKIS 180

Query: 566  INASLAGAIIGKNGVNSKQICRITGAKLSIREHDSDPNLRNIELEGSFDQIKQASAMVHD 387
            ++ASLAGAIIGK+GVNSKQICR+TGAKLSI++HDSDPNLRNIELEG+FDQIKQASAMV +
Sbjct: 181  VDASLAGAIIGKSGVNSKQICRLTGAKLSIKDHDSDPNLRNIELEGTFDQIKQASAMVRE 240

Query: 386  LILNVSSVSGPPMKNNTTQTSGPASNFKTKLCENFTKGSCTFGERCHFAHGTDELRR 216
            LI+N+SS SGPPM+N   Q S  A+NFKTKLCENFTKGSCTFGERCHFAHG DELR+
Sbjct: 241  LIVNISSASGPPMRNPAMQASAAANNFKTKLCENFTKGSCTFGERCHFAHGADELRK 297


>ref|XP_002299153.1| predicted protein [Populus trichocarpa] gi|222846411|gb|EEE83958.1|
            predicted protein [Populus trichocarpa]
          Length = 304

 Score =  402 bits (1032), Expect = e-109
 Identities = 200/302 (66%), Positives = 224/302 (74%), Gaps = 2/302 (0%)
 Frame = -3

Query: 1106 RKRGRPDGPFNGNGGAKKFRPEMESFPTGLGSKSKPCTKFFSTSGCPFGEGCHFLHYVPG 927
            RKR R D  FNGNGG KK R EMESF TG+GSKSKPCTKFFSTSGCPFGEGCHFLHYVPG
Sbjct: 8    RKRTRNDAAFNGNGGHKKNRQEMESFSTGIGSKSKPCTKFFSTSGCPFGEGCHFLHYVPG 67

Query: 926  GVKAASQIINVGSNPAVPQMGRNQTVPP-SFPDGSSPPVVKTRLCNKYNTAEGCKFGDKC 750
            G KA SQ++NVG +PA+P   RNQ VP  S+ D SSPP VK+RLCNKYNT EGCKFGDKC
Sbjct: 68   GFKAVSQMLNVGGSPALPPASRNQGVPTLSYQDRSSPPSVKSRLCNKYNTVEGCKFGDKC 127

Query: 749  HFAHGEWELGRPN-APSYEDAXXXXXXXXXXXXXXXXXRIEXXXXXXXXXXXXXXXXXAK 573
            HFAHGEWELG+ + APSYED                   +E                  K
Sbjct: 128  HFAHGEWELGKASAAPSYED-----PRAMGPIPGRMSRHMEHPHQGHGAAASFGSSATTK 182

Query: 572  ISINASLAGAIIGKNGVNSKQICRITGAKLSIREHDSDPNLRNIELEGSFDQIKQASAMV 393
            ISI+ASLAGAIIGKNGVNSK ICR+TGAKLSIR+H++DP  R+IELEGSFDQI QAS MV
Sbjct: 183  ISIDASLAGAIIGKNGVNSKHICRVTGAKLSIRDHEADPKKRSIELEGSFDQISQASDMV 242

Query: 392  HDLILNVSSVSGPPMKNNTTQTSGPASNFKTKLCENFTKGSCTFGERCHFAHGTDELRRS 213
              LI NV   SGPP+KN    +SG ++NFKTK+CENF KGSCTFG+RCHFAHG +ELR+S
Sbjct: 243  RQLISNVGQASGPPIKNQAMHSSGGSNNFKTKICENFNKGSCTFGDRCHFAHGAEELRKS 302

Query: 212  GM 207
            GM
Sbjct: 303  GM 304


>ref|XP_003592859.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
            gi|355481907|gb|AES63110.1| Zinc finger CCCH
            domain-containing protein [Medicago truncatula]
          Length = 340

 Score =  399 bits (1026), Expect = e-109
 Identities = 197/272 (72%), Positives = 211/272 (77%)
 Frame = -3

Query: 1022 GLGSKSKPCTKFFSTSGCPFGEGCHFLHYVPGGVKAASQIINVGSNPAVPQMGRNQTVPP 843
            G+    +P  + F TSGCPFGEGCHFLHYVPGG KA  Q+INVGS+PA+P +GRN  VP 
Sbjct: 73   GVPRPQEPLWRDFDTSGCPFGEGCHFLHYVPGGFKAVYQMINVGSSPAIPPIGRNPNVPQ 132

Query: 842  SFPDGSSPPVVKTRLCNKYNTAEGCKFGDKCHFAHGEWELGRPNAPSYEDAXXXXXXXXX 663
            SFPDGSSPPV KTRLCNK+NTAEGCKFGDKCHFAHGEWELGRP  P+YED          
Sbjct: 133  SFPDGSSPPVAKTRLCNKFNTAEGCKFGDKCHFAHGEWELGRPTVPAYEDTRAMGQMQSS 192

Query: 662  XXXXXXXXRIEXXXXXXXXXXXXXXXXXAKISINASLAGAIIGKNGVNSKQICRITGAKL 483
                     IE                 A +SINA+LAGAIIGKN VNSKQIC ITGAKL
Sbjct: 193  SVGGR----IEPPPPAHGAAAGFGVSATATVSINATLAGAIIGKNDVNSKQICHITGAKL 248

Query: 482  SIREHDSDPNLRNIELEGSFDQIKQASAMVHDLILNVSSVSGPPMKNNTTQTSGPASNFK 303
            SIREHDSDPNLRNIELEGSFDQIKQASAMVHDLILNVSSVSGPP KN T+QTS PA+NFK
Sbjct: 249  SIREHDSDPNLRNIELEGSFDQIKQASAMVHDLILNVSSVSGPPGKNITSQTSAPANNFK 308

Query: 302  TKLCENFTKGSCTFGERCHFAHGTDELRRSGM 207
            TKLCENFTKGSCTFGERCHFAHGTDELR+ GM
Sbjct: 309  TKLCENFTKGSCTFGERCHFAHGTDELRKPGM 340


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