BLASTX nr result

ID: Glycyrrhiza24_contig00008505 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00008505
         (1373 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001241466.1| uncharacterized protein LOC100815072 [Glycin...   144   2e-54
ref|XP_003594083.1| F-box/kelch-repeat protein [Medicago truncat...   136   5e-53
ref|XP_003546119.1| PREDICTED: F-box/kelch-repeat protein At3g23...   139   1e-51
ref|XP_003615582.1| F-box/kelch-repeat protein [Medicago truncat...    99   8e-37
ref|XP_003623091.1| F-box/kelch-repeat protein [Medicago truncat...   116   9e-36

>ref|NP_001241466.1| uncharacterized protein LOC100815072 [Glycine max]
           gi|255637050|gb|ACU18857.1| unknown [Glycine max]
          Length = 406

 Score =  144 bits (362), Expect(2) = 2e-54
 Identities = 93/233 (39%), Positives = 129/233 (55%), Gaps = 4/233 (1%)
 Frame = +2

Query: 125 ELVFEILTRLPVKSLMRFKCVCKQWNYMISDTHFAKSHLFRSTVDXXXXXXXXXXXXXXG 304
           ELV EIL+RLPVKSL++F+CVCK W  +ISD +F K HL  S+                 
Sbjct: 52  ELVVEILSRLPVKSLLQFRCVCKSWMSLISDPYFMKKHLHLSSRCTHFTHHRIILSATTA 111

Query: 305 QGEVMSCSVKPLLFNDPLALTSPESVDFMLRHKYQ---IIGSCNGLVCLADFRNGHVRLW 475
           +  + SCS+   LFN+P + T  + +++ +++K++   I+GSCNGL+C A  +   V LW
Sbjct: 112 EFHLKSCSLSS-LFNNP-SSTVCDDLNYPVKNKFRHDGIVGSCNGLLCFA-IKGDCVLLW 168

Query: 476 NPSTRLLSRKSPFMXXXXXXXXMAICHGFGYDHVSGKYKVVLVFPDPWFDNVHRTVTKVY 655
           NPS R +S+KSP +             G GYDHV+  YKVV VF DP  +       KVY
Sbjct: 169 NPSIR-VSKKSPPLGNNWRPGCFT-AFGLGYDHVNEDYKVVAVFCDP-SEYFIECKVKVY 225

Query: 656 TFGDSSWKTIQNLGYLGYPKNVLGKFVGDTLNWVVNGVSDVTPHQ-WVILSFD 811
           +   +SW+ IQ+  +   P    GKFV  TLNW  N    + P   WVI+S D
Sbjct: 226 SMATNSWRKIQDFPHGFLPFQNSGKFVSGTLNWAAN--HSIGPSSFWVIVSLD 276



 Score = 97.1 bits (240), Expect(2) = 2e-54
 Identities = 52/115 (45%), Positives = 72/115 (62%), Gaps = 6/115 (5%)
 Frame = +1

Query: 925  PIQAVLKDCLCVCYDHEETHLVVWLMREYGVRESWMKLMVIPHEELQIFGFVP------Y 1086
            P   VL+ CLC+ YD+++TH VVW+M++YGVRESW+KL+ IP        +VP      Y
Sbjct: 298  PSLGVLQGCLCMNYDYKKTHFVVWMMKDYGVRESWVKLVSIP--------YVPNPEDFSY 349

Query: 1087 IEPLCMSENGMVLVYTTFVRALVYDSKVGRLEYPNIQSDKVWNEQFVYVESLVSP 1251
              P  +SENG VL+   F   ++YD +    +YP I+S K W +  VYVE+LVSP
Sbjct: 350  SGPYYISENGKVLLMFEF-DLILYDPRNNSFKYPKIESGKGWFDAEVYVETLVSP 403


>ref|XP_003594083.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355483131|gb|AES64334.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 366

 Score =  136 bits (342), Expect(2) = 5e-53
 Identities = 89/234 (38%), Positives = 130/234 (55%), Gaps = 5/234 (2%)
 Frame = +2

Query: 125 ELVFEILTRLPVKSLMRFKCVCKQWNYMISDTHFAKSHLFRSTVD-XXXXXXXXXXXXXX 301
           EL+ EIL +LP+KSL+RF+CVCK W ++IS+ +F K  L  ST +               
Sbjct: 11  ELILEILIKLPIKSLLRFRCVCKSWLHIISNPYFIKKQLHFSTQNTHFTTNHRIILSATT 70

Query: 302 GQGEVMSCSVKPLLFNDPLALTSPESVDFMLRHKYQ---IIGSCNGLVCLADFRNGHVRL 472
            +  + SCS+   LFN+P   T  + +++ +++K++   I+GSCNGL+C A  +   V L
Sbjct: 71  AEFHLKSCSITS-LFNNP--STVSDDLNYPVKNKFRHDGIVGSCNGLLCFA-IKGDCVLL 126

Query: 473 WNPSTRLLSRKSPFMXXXXXXXXMAICHGFGYDHVSGKYKVVLVFPDPWFDNVHRTVTKV 652
           WNPS R +S+KSP +           C G GYDHV+  YKVV VF DP  +    +  KV
Sbjct: 127 WNPSIR-VSKKSPPLGNNWRPGCFT-CFGLGYDHVNDDYKVVAVFCDP-NEFFSESKVKV 183

Query: 653 YTFGDSSWKTIQNLGYLGYP-KNVLGKFVGDTLNWVVNGVSDVTPHQWVILSFD 811
           Y+   ++W+ I +  +   P +N  GKFV  TLNW  N  S  +   W I+S D
Sbjct: 184 YSMATNTWRKIHDFPHGVSPYQNSSGKFVSGTLNWASN-YSIGSSSFWTIVSLD 236



 Score = 99.8 bits (247), Expect(2) = 5e-53
 Identities = 53/109 (48%), Positives = 70/109 (64%)
 Frame = +1

Query: 925  PIQAVLKDCLCVCYDHEETHLVVWLMREYGVRESWMKLMVIPHEELQIFGFVPYIEPLCM 1104
            P  +VLK CLC+ YD+++T  VVWLM++YGVRESW+KL+ IP+  L       Y  P C+
Sbjct: 258  PSLSVLKGCLCMNYDYKKTDFVVWLMKDYGVRESWIKLLTIPY--LPNPEDFSYSGPYCI 315

Query: 1105 SENGMVLVYTTFVRALVYDSKVGRLEYPNIQSDKVWNEQFVYVESLVSP 1251
            SENG VL+   F   ++YD +     YP I+  K W +  VYVESLVSP
Sbjct: 316  SENGEVLLMFEF-DLILYDPRDHSFRYPRIEGGKGWFDAEVYVESLVSP 363


>ref|XP_003546119.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like [Glycine max]
          Length = 405

 Score =  139 bits (349), Expect(2) = 1e-51
 Identities = 90/232 (38%), Positives = 124/232 (53%), Gaps = 3/232 (1%)
 Frame = +2

Query: 125 ELVFEILTRLPVKSLMRFKCVCKQWNYMISDTHFAKSHLFRSTVDXXXXXXXXXXXXXXG 304
           ELV EIL+RLPVKSL++F+CVCK W  +I D +F K HL  S+                 
Sbjct: 52  ELVVEILSRLPVKSLLQFRCVCKSWMSLIYDPYFMKKHLHLSSRSTHFTHHRIILSATTA 111

Query: 305 QGEVMSCSVKPLLFNDPLALTSPESVDFMLRHKYQ---IIGSCNGLVCLADFRNGHVRLW 475
           +  + SCS+  L  N     T  + +++ +++K++   I+GSCNGL+C A  +   V LW
Sbjct: 112 EFHLKSCSLSSLFNN---LSTVCDELNYPVKNKFRHDGIVGSCNGLLCFA-IKGDCVLLW 167

Query: 476 NPSTRLLSRKSPFMXXXXXXXXMAICHGFGYDHVSGKYKVVLVFPDPWFDNVHRTVTKVY 655
           NPS R +S+KSP +             G GYDHV+  YKVV VF DP  +       KVY
Sbjct: 168 NPSIR-VSKKSPPLGNNWRPGCFT-AFGLGYDHVNEDYKVVAVFCDP-SEYFIECKVKVY 224

Query: 656 TFGDSSWKTIQNLGYLGYPKNVLGKFVGDTLNWVVNGVSDVTPHQWVILSFD 811
           +   +SW+ IQ+  +   P    GKFV  TLNW  N  S  +   WVI+S D
Sbjct: 225 SMATNSWRKIQDFPHGFSPFQNSGKFVSGTLNWAANH-SIGSSSLWVIVSLD 275



 Score = 92.4 bits (228), Expect(2) = 1e-51
 Identities = 50/115 (43%), Positives = 71/115 (61%), Gaps = 6/115 (5%)
 Frame = +1

Query: 925  PIQAVLKDCLCVCYDHEETHLVVWLMREYGVRESWMKLMVIPHEELQIFGFVP------Y 1086
            P   VL+ CLC+ YD+++TH VVW+M++YG RESW+KL+ IP        +VP      Y
Sbjct: 297  PGLGVLQGCLCMNYDYKKTHFVVWMMKDYGARESWVKLVSIP--------YVPNPENFSY 348

Query: 1087 IEPLCMSENGMVLVYTTFVRALVYDSKVGRLEYPNIQSDKVWNEQFVYVESLVSP 1251
              P  +SENG VL+   F   ++Y+ +    +YP I+S K W +  VYVE+LVSP
Sbjct: 349  SGPYYISENGEVLLMFEF-DLILYNPRDNSFKYPKIESGKGWFDAEVYVETLVSP 402


>ref|XP_003615582.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355516917|gb|AES98540.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 402

 Score = 99.0 bits (245), Expect(2) = 8e-37
 Identities = 74/243 (30%), Positives = 113/243 (46%), Gaps = 14/243 (5%)
 Frame = +2

Query: 125 ELVFEILTRLPVKSLMRFKCVCKQWNYMISDTHFAKSHLFRSTVDXXXXXXXXXXXXXXG 304
           EL+ E+L+ LPV+SLMR +CVCK W  +ISD  F K HL R +                 
Sbjct: 40  ELIAEVLSFLPVQSLMRLRCVCKSWKTLISDKSFVKLHLQRPS-----RKKHIAVIETEA 94

Query: 305 QGEVMSCSVKPLLFNDPLALTSPESVDFMLRHKYQIIGSCNGLVCLADF---RNGH---- 463
              V++  +  LL N  + + +        +   +++GSCNGL+CL  +   RN      
Sbjct: 95  GYNVVTFPLNHLLENPSVTIATNSYYRLEYKDCSRVVGSCNGLLCLLGYSYLRNHDETVF 154

Query: 464 -VRLWNPSTRLLSRKSPFMXXXXXXXXMAICHGFGYDHVSGKYKVVLVFPDPWFDNVHRT 640
              +WNP+TR++S+K            +     FGYD  +  Y  V++          R 
Sbjct: 155 WFHIWNPATRIISKKLGTCHQPCRPGKLTF--SFGYDISTRTYNAVVL--------CSRE 204

Query: 641 VTKVYTFGDSSWKTIQN------LGYLGYPKNVLGKFVGDTLNWVVNGVSDVTPHQWVIL 802
           V KV+ FGD+ W+ I +      L  LG      G  +  T+NW+   + DVT  ++VI+
Sbjct: 205 V-KVFRFGDNIWRKIVSFTPYNLLDTLGCSYVNQGVHLSGTVNWISIYLKDVTVEKFVII 263

Query: 803 SFD 811
           S D
Sbjct: 264 SLD 266



 Score = 82.8 bits (203), Expect(2) = 8e-37
 Identities = 46/114 (40%), Positives = 67/114 (58%), Gaps = 3/114 (2%)
 Frame = +1

Query: 922  EPIQAVLKDCLCVCYDHEETHLVVWLMREYGVRESWMKLMVIPHEELQIFGFVP-YIEPL 1098
            EP  AVL D LC  +  +ETH V+W M E+GV +SW + + I  + LQ+  F   Y+ P 
Sbjct: 290  EPTIAVLLDRLCFSHHFKETHFVIWQMIEFGVEQSWTQFLKISFQNLQVDNFSEYYLFPF 349

Query: 1099 CMSENGMVLVYTTFV--RALVYDSKVGRLEYPNIQSDKVWNEQFVYVESLVSPC 1254
            C+SENG  L++ ++V  +A++Y+ K  R++   I S   W     YVESL S C
Sbjct: 350  CLSENGETLIFASYVGHKAILYNLKTNRVK-KAIGSAITWCYSKDYVESLASIC 402


>ref|XP_003623091.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355498106|gb|AES79309.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 389

 Score =  116 bits (290), Expect(2) = 9e-36
 Identities = 82/249 (32%), Positives = 121/249 (48%), Gaps = 20/249 (8%)
 Frame = +2

Query: 125 ELVFEILTRLPVKSLMRFKCVCKQWNYMISDTHFAKSHLFRSTVDXXXXXXXXXXXXXXG 304
           EL+ E+L+ LPVKSLMR KCV K W Y+IS+  FAK HL R+T D               
Sbjct: 16  ELIVEVLSFLPVKSLMRLKCVSKSWKYLISEPSFAKLHLNRTTQDAVSTIVSNNIYSR-- 73

Query: 305 QGEVMSCSVKPLLFNDPLALTSPESVDFMLRHK--YQIIGSCNGLVCL----------AD 448
            G  MS +V  LL N P+ +  P    + L  K    I+GSCNGL+CL            
Sbjct: 74  TGTEMSFTVFRLLENPPIIINLPRDPYYPLNDKAFRYIVGSCNGLLCLFGGTGYREDNGG 133

Query: 449 FRNGHVRLWNPSTRLLSRKSPFMXXXXXXXXMAICHGFGYDHVSGKYKVVLVFPDPWFDN 628
           +R   +R WNP+TR++S K                + FGYD+ +  YKVV       +  
Sbjct: 134 YRENWLRFWNPATRIISEK----FHGDDGLGFPCNYTFGYDNSTETYKVV-------YFT 182

Query: 629 VHRTVTKVYTFGDSSWKTIQNLGYLGYPKNVLGKFVGDTLNWVV--NGVS------DVTP 784
              T  +V++ G + W+ IQ+   + + + +    V  ++NW+   N +S      D+T 
Sbjct: 183 RKTTNVRVFSLGVNVWRNIQDSHMIHHHRQMKVMHVRGSVNWLAIHNYISYYYNFKDITI 242

Query: 785 HQWVILSFD 811
            ++VI+S D
Sbjct: 243 EEFVIISLD 251



 Score = 62.0 bits (149), Expect(2) = 9e-36
 Identities = 30/74 (40%), Positives = 46/74 (62%), Gaps = 4/74 (5%)
 Frame = +1

Query: 925  PIQAVLKDCLCVCYDHEETHLVVWLMREYGVRESWMKLMVIPHEELQIFGFVPY----IE 1092
            P  +VLKDCLC  +D + TH ++W M+++GV+ESW +L  I ++ LQI    P+    + 
Sbjct: 274  PNLSVLKDCLCFSHDFKRTHFIIWQMKQFGVQESWTRLFKISYKNLQI--DCPFNDFCLL 331

Query: 1093 PLCMSENGMVLVYT 1134
            PLC+ E    L+ T
Sbjct: 332  PLCLLEKKDTLLLT 345


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