BLASTX nr result

ID: Glycyrrhiza24_contig00008451 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00008451
         (2043 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003522431.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   670   0.0  
dbj|BAD18438.1| unnamed protein product [Homo sapiens]                670   0.0  
ref|XP_003526886.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   666   0.0  
ref|XP_003604065.1| DEAD-box ATP-dependent RNA helicase [Medicag...   626   e-177
emb|CBI26041.3| unnamed protein product [Vitis vinifera]              588   e-165

>ref|XP_003522431.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 50-like [Glycine max]
          Length = 528

 Score =  670 bits (1728), Expect = 0.0
 Identities = 350/486 (72%), Positives = 383/486 (78%), Gaps = 4/486 (0%)
 Frame = +3

Query: 222  FGRLKAQQVKALIHRTKQHQ--RPSLQDEDDADDRRFRGWGDTDPTPTXXXXXXXXXXXX 395
            FGR+K      L+HR ++ Q  R ++Q EDD DD       D  P P             
Sbjct: 54   FGRVKT----LLVHRRRKDQSHRRAVQLEDDNDD-------DIAPRPRRSQSRSRGGERW 102

Query: 396  XRKPK--SPVLPVLDNNFFSLNSFKDIGCSDNILQSLQTQSLTRPSHIQAMAFAPVTGGK 569
               P          D  FFSL SFK+IGCS+ +++SLQ   L+RPSH+QAMAFAPV  GK
Sbjct: 103  DMIPNYTPQSKSATDTKFFSLKSFKEIGCSEYMIESLQKLLLSRPSHVQAMAFAPVISGK 162

Query: 570  TCVIADQSGSGKTLAYLVPXXXXXXXXXXXXGRNKSSSQAPRVVILAPTAELASQVLDNC 749
            TCVIADQSGSGKTLAYL P              +KSSSQAPRV++LAPTAELASQVLDNC
Sbjct: 163  TCVIADQSGSGKTLAYLAPIIQLLRLEELEGRSSKSSSQAPRVLVLAPTAELASQVLDNC 222

Query: 750  RSMSKSGVPFKSMVVTGGFRQRTQLENLQQGVDVLIATPGRFLFLMKEGFLQLTNLKCAV 929
            RS+SKSGVPFKSMVVTGGFRQ+TQLENLQQGVDVLIATPGRFLFL+ EGFLQLTNL+CA+
Sbjct: 223  RSLSKSGVPFKSMVVTGGFRQKTQLENLQQGVDVLIATPGRFLFLIHEGFLQLTNLRCAI 282

Query: 930  LDEVDILFGDEDFEMALQCLINSSPVDTQYLFVTATLPNNVYSKLVEVFPDCEMIMGPGM 1109
            LDEVDILFGDEDFE+ALQ LINSSPVDTQYLFVTATLP NVY+KLVEVFPDCEMIMGPGM
Sbjct: 283  LDEVDILFGDEDFEVALQSLINSSPVDTQYLFVTATLPKNVYTKLVEVFPDCEMIMGPGM 342

Query: 1110 HRISSRLEEILVDCSGEDGQEKTPDTAFLNKKAALLQLAGERPVPRTIVFCNKIETCRKV 1289
            HRISSRL+EI+VDCSGEDGQEKTPDTAFLNKK ALLQL  E PVPRTIVFCNKIETCRKV
Sbjct: 343  HRISSRLQEIIVDCSGEDGQEKTPDTAFLNKKTALLQLVEENPVPRTIVFCNKIETCRKV 402

Query: 1290 ENALKRIDKKGSRIQVLPFHAAMTQESRLASMKEFARPPSKSISQFMICTDRASRGIDFA 1469
            EN LKR D+KG+ +QVLPFHAAMTQESRLASM+EF R PSK +SQFM+CTDRASRGIDF 
Sbjct: 403  ENLLKRFDRKGNHVQVLPFHAAMTQESRLASMEEFTRSPSKGVSQFMVCTDRASRGIDFT 462

Query: 1470 GVDHVILFDFPREPSEYXXXXXXXXXXXXXXXKAFIFVVGKQVSLARKIMERNRKGHPLH 1649
             VDHVILFDFPR+PSEY               KAFIFVVGKQVSLARKIMERN+KGHPLH
Sbjct: 463  RVDHVILFDFPRDPSEYVRRVGRTARGAKGVGKAFIFVVGKQVSLARKIMERNQKGHPLH 522

Query: 1650 DVPSAY 1667
            DVPSAY
Sbjct: 523  DVPSAY 528


>dbj|BAD18438.1| unnamed protein product [Homo sapiens]
          Length = 528

 Score =  670 bits (1728), Expect = 0.0
 Identities = 350/486 (72%), Positives = 383/486 (78%), Gaps = 4/486 (0%)
 Frame = +3

Query: 222  FGRLKAQQVKALIHRTKQHQ--RPSLQDEDDADDRRFRGWGDTDPTPTXXXXXXXXXXXX 395
            FGR+K      L+HR ++ Q  R ++Q EDD DD       D  P P             
Sbjct: 54   FGRVKT----LLVHRRRKDQSHRRAVQLEDDNDD-------DIAPRPRRSQSRSRGGERW 102

Query: 396  XRKPK--SPVLPVLDNNFFSLNSFKDIGCSDNILQSLQTQSLTRPSHIQAMAFAPVTGGK 569
               P          D  FFSL SFK+IGCS+ +++SLQ   L+RPSH+QAMAFAPV  GK
Sbjct: 103  DMIPNYTPQSKSATDTKFFSLKSFKEIGCSEYMIESLQKLLLSRPSHVQAMAFAPVISGK 162

Query: 570  TCVIADQSGSGKTLAYLVPXXXXXXXXXXXXGRNKSSSQAPRVVILAPTAELASQVLDNC 749
            TCVIADQSGSGKTLAYL P              +KSSSQAPRV++LAPTAELASQVLDNC
Sbjct: 163  TCVIADQSGSGKTLAYLAPIIQLLRLEELEGRSSKSSSQAPRVLVLAPTAELASQVLDNC 222

Query: 750  RSMSKSGVPFKSMVVTGGFRQRTQLENLQQGVDVLIATPGRFLFLMKEGFLQLTNLKCAV 929
            RS+SKSGVPFKSMVVTGGFRQ+TQLENLQQGVDVLIATPGRFLFL+ EGFLQLTNL+CA+
Sbjct: 223  RSLSKSGVPFKSMVVTGGFRQKTQLENLQQGVDVLIATPGRFLFLIHEGFLQLTNLRCAI 282

Query: 930  LDEVDILFGDEDFEMALQCLINSSPVDTQYLFVTATLPNNVYSKLVEVFPDCEMIMGPGM 1109
            LDEVDILFGDEDFE+ALQ LINSSPVDTQYLFVTATLP NVY+KLVEVFPDCEMIMGPGM
Sbjct: 283  LDEVDILFGDEDFEVALQSLINSSPVDTQYLFVTATLPKNVYTKLVEVFPDCEMIMGPGM 342

Query: 1110 HRISSRLEEILVDCSGEDGQEKTPDTAFLNKKAALLQLAGERPVPRTIVFCNKIETCRKV 1289
            HRISSRL+EI+VDCSGEDGQEKTPDTAFLNKK ALLQL  E PVPRTIVFCNKIETCRKV
Sbjct: 343  HRISSRLQEIIVDCSGEDGQEKTPDTAFLNKKTALLQLVEENPVPRTIVFCNKIETCRKV 402

Query: 1290 ENALKRIDKKGSRIQVLPFHAAMTQESRLASMKEFARPPSKSISQFMICTDRASRGIDFA 1469
            EN LKR D+KG+ +QVLPFHAAMTQESRLASM+EF R PSK +SQFM+CTDRASRGIDF 
Sbjct: 403  ENLLKRFDRKGNHVQVLPFHAAMTQESRLASMEEFTRSPSKGVSQFMVCTDRASRGIDFT 462

Query: 1470 GVDHVILFDFPREPSEYXXXXXXXXXXXXXXXKAFIFVVGKQVSLARKIMERNRKGHPLH 1649
             VDHVILFDFPR+PSEY               KAFIFVVGKQVSLARKIMERN+KGHPLH
Sbjct: 463  RVDHVILFDFPRDPSEYVRRVGRTARGAKGVGKAFIFVVGKQVSLARKIMERNQKGHPLH 522

Query: 1650 DVPSAY 1667
            DVPSAY
Sbjct: 523  DVPSAY 528


>ref|XP_003526886.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 50-like [Glycine max]
          Length = 530

 Score =  666 bits (1719), Expect = 0.0
 Identities = 354/497 (71%), Positives = 388/497 (78%), Gaps = 15/497 (3%)
 Frame = +3

Query: 222  FGRLKAQQVKAL-IHRT---KQHQRP-SLQDEDD--------ADDRRFRGWGDTDPTPTX 362
            FGRLKAQ+VK L +HR    + H+RP  L+D+DD            R RG    D  P  
Sbjct: 47   FGRLKAQKVKTLLVHRRGKDQSHRRPVHLEDDDDYVATPRPRRSQSRTRGGERWDMIPNY 106

Query: 363  XXXXXXXXXXXXRKPKSPVLPVLDNNFFSLNSFKDIGCSDNILQSLQTQSLTRPSHIQAM 542
                          P +    V D  FFSL SFK+IGCS+ +++SLQ    +RPSH+QAM
Sbjct: 107  T-------------PPAQSKSVSDTKFFSLKSFKEIGCSEYMIESLQKLLFSRPSHVQAM 153

Query: 543  AFAPVTGGKTCVIADQSGSGKTLAYLVPXXXXXXXXXXXXGRNKSSSQAP--RVVILAPT 716
            AF PV  GKTCVIADQSGSGKT AYL P              +KSSSQAP  RV++LAPT
Sbjct: 154  AFTPVISGKTCVIADQSGSGKTFAYLAPIIQRLRQQELEGIISKSSSQAPSPRVLVLAPT 213

Query: 717  AELASQVLDNCRSMSKSGVPFKSMVVTGGFRQRTQLENLQQGVDVLIATPGRFLFLMKEG 896
            AELASQVLDNCRS+SKSGVPFKSMVVTGGFRQ+TQLENLQQGVDVLIATPGRFLFL+ +G
Sbjct: 214  AELASQVLDNCRSLSKSGVPFKSMVVTGGFRQKTQLENLQQGVDVLIATPGRFLFLINQG 273

Query: 897  FLQLTNLKCAVLDEVDILFGDEDFEMALQCLINSSPVDTQYLFVTATLPNNVYSKLVEVF 1076
            FL LTNL+CAVLDEVDILFGDEDFE+ALQ LINSSPVDTQYLFVTATLP NVY+KLVEVF
Sbjct: 274  FLHLTNLRCAVLDEVDILFGDEDFEVALQSLINSSPVDTQYLFVTATLPKNVYTKLVEVF 333

Query: 1077 PDCEMIMGPGMHRISSRLEEILVDCSGEDGQEKTPDTAFLNKKAALLQLAGERPVPRTIV 1256
            PDCEMIMGPGMHRISSRL+EI+VDCSGEDGQEKTPDTAFLNKK ALLQL  E PVPRTIV
Sbjct: 334  PDCEMIMGPGMHRISSRLQEIIVDCSGEDGQEKTPDTAFLNKKTALLQLVEESPVPRTIV 393

Query: 1257 FCNKIETCRKVENALKRIDKKGSRIQVLPFHAAMTQESRLASMKEFARPPSKSISQFMIC 1436
            FCNKIETCRKVEN LKR D+KG+ +QVLPFHAAMTQESRLASM+EF R PSK +SQFM+C
Sbjct: 394  FCNKIETCRKVENLLKRFDRKGNCVQVLPFHAAMTQESRLASMEEFTRSPSKGVSQFMVC 453

Query: 1437 TDRASRGIDFAGVDHVILFDFPREPSEYXXXXXXXXXXXXXXXKAFIFVVGKQVSLARKI 1616
            TDRASRGIDFA VDHVILFDFPR+PSEY               KAFIFVVGKQVSLARKI
Sbjct: 454  TDRASRGIDFARVDHVILFDFPRDPSEYVRRVGRTARGAKGVGKAFIFVVGKQVSLARKI 513

Query: 1617 MERNRKGHPLHDVPSAY 1667
            MERN+KGHPLHDVPSAY
Sbjct: 514  MERNQKGHPLHDVPSAY 530


>ref|XP_003604065.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
            gi|355493113|gb|AES74316.1| DEAD-box ATP-dependent RNA
            helicase [Medicago truncatula]
          Length = 568

 Score =  626 bits (1615), Expect = e-177
 Identities = 335/490 (68%), Positives = 373/490 (76%), Gaps = 8/490 (1%)
 Frame = +3

Query: 222  FGRLKAQQVKALIHRTKQH---QRPSLQDEDDADDRRFRGWGDT----DPTPTXXXXXXX 380
            FGRLK ++V ALIHRTKQ+   ++  LQ ED+ +D        T                
Sbjct: 45   FGRLKVEKVNALIHRTKQNTTKRKQLLQPEDEDEDNSASATATTRRQQQQQQQQHTHSRV 104

Query: 381  XXXXXXRKPKSPVLPVLDNNFFSLNSFKDIGCSDNILQSLQTQSLTRPSHIQAMAFAPVT 560
                     KS  L   D NFFSL SFK IGC+D +++SL   SLTRPS+IQAM+F PV 
Sbjct: 105  GWGDNRVSSKSLALASEDTNFFSLKSFKGIGCADFMIESLHNLSLTRPSNIQAMSFPPVI 164

Query: 561  GGKTCVIADQSGSGKTLAYLVPXXXXXXXXXXXXGRNKSSSQAPRVVILAPTAELASQVL 740
             GK+C+IADQSGSGKTLAYLVP            G +KSSSQ+P ++ILAPTAELASQV 
Sbjct: 165  AGKSCIIADQSGSGKTLAYLVPIIQRLRQQELQ-GLHKSSSQSPTLLILAPTAELASQVF 223

Query: 741  DNCRSMSKSGV-PFKSMVVTGGFRQRTQLENLQQGVDVLIATPGRFLFLMKEGFLQLTNL 917
             NCRS+SKSGV PFKSM+VTGGFRQ+TQL+ L QGVDVLIATPGRFLFL+ +GF      
Sbjct: 224  HNCRSISKSGVVPFKSMLVTGGFRQKTQLDTLNQGVDVLIATPGRFLFLINQGFF----- 278

Query: 918  KCAVLDEVDILFGDEDFEMALQCLINSSPVDTQYLFVTATLPNNVYSKLVEVFPDCEMIM 1097
              AVLDEVDILFGDEDFE ALQCLI+SSPVDTQYLFVTATLP NVYSKLVEVFPDCEM+M
Sbjct: 279  --AVLDEVDILFGDEDFEKALQCLISSSPVDTQYLFVTATLPKNVYSKLVEVFPDCEMVM 336

Query: 1098 GPGMHRISSRLEEILVDCSGEDGQEKTPDTAFLNKKAALLQLAGERPVPRTIVFCNKIET 1277
            GP MHRI+SRLEEI+VDCSGEDGQEKT DTAFLNKKAALLQLA +  VPRTIVFCNKIET
Sbjct: 337  GPSMHRINSRLEEIIVDCSGEDGQEKTLDTAFLNKKAALLQLAEKNRVPRTIVFCNKIET 396

Query: 1278 CRKVENALKRIDKKGSRIQVLPFHAAMTQESRLASMKEFARPPSKSISQFMICTDRASRG 1457
            CRKVENAL R D+KG R+QVLPFHAAMTQESRLASMKEF R P K +SQFM+CTDRASRG
Sbjct: 397  CRKVENALNRFDRKGIRMQVLPFHAAMTQESRLASMKEFTRSPPKELSQFMVCTDRASRG 456

Query: 1458 IDFAGVDHVILFDFPREPSEYXXXXXXXXXXXXXXXKAFIFVVGKQVSLARKIMERNRKG 1637
            IDF  VDHVILFD+PR+PSEY               KAFIFVVGKQVSLARK+MERNRKG
Sbjct: 457  IDFTRVDHVILFDYPRDPSEYVRRVGRTARGARGQGKAFIFVVGKQVSLARKVMERNRKG 516

Query: 1638 HPLHDVPSAY 1667
            HPLHDVPS +
Sbjct: 517  HPLHDVPSGH 526


>emb|CBI26041.3| unnamed protein product [Vitis vinifera]
          Length = 648

 Score =  588 bits (1515), Expect = e-165
 Identities = 316/520 (60%), Positives = 369/520 (70%), Gaps = 38/520 (7%)
 Frame = +3

Query: 222  FGRLKAQQVKALIHRTKQHQR-----------------------------PSLQDEDDA- 311
            FGRLKAQ+VKAL  +T + +R                             P   D   A 
Sbjct: 131  FGRLKAQRVKALTTKTSKAKRELNEYKIHSDKTVKRDIGKFSELQITPEKPHRSDNKIAG 190

Query: 312  --------DDRRFRGWGDTDPTPTXXXXXXXXXXXXXRKPKSPVLPVLDNNFFSLNSFKD 467
                         +GWG  +   T             R+ K   L   D++FFS  SF+D
Sbjct: 191  ADVLVPRVSTANLQGWGYGE---TMRNFEFETTNIPKRRGKGNSLA--DSDFFSGKSFRD 245

Query: 468  IGCSDNILQSLQTQSLTRPSHIQAMAFAPVTGGKTCVIADQSGSGKTLAYLVPXXXXXXX 647
            +GCSD +++SL+ Q   RPSHIQAMAFA V  GK+C+IADQSGSGKTLAYL+P       
Sbjct: 246  LGCSDYMIESLRGQLFVRPSHIQAMAFATVMEGKSCIIADQSGSGKTLAYLLPVIQRLRE 305

Query: 648  XXXXXGRNKSSSQAPRVVILAPTAELASQVLDNCRSMSKSGVPFKSMVVTGGFRQRTQLE 827
                 G  KSS+  P+VVIL PTAELASQVL NCRS+SK G PF+SM  TGGFRQRTQLE
Sbjct: 306  EELQ-GLGKSSAGCPQVVILVPTAELASQVLSNCRSISKFGAPFRSMAATGGFRQRTQLE 364

Query: 828  NLQQGVDVLIATPGRFLFLMKEGFLQLTNLKCAVLDEVDILFGDEDFEMALQCLINSSPV 1007
            NLQQ +DVLIATPGRF+FL+KEGFLQLTNL+CAVLDEVDIL  DEDFE+ALQ LINSSPV
Sbjct: 365  NLQQDLDVLIATPGRFMFLIKEGFLQLTNLRCAVLDEVDILLNDEDFELALQTLINSSPV 424

Query: 1008 DTQYLFVTATLPNNVYSKLVEVFPDCEMIMGPGMHRISSRLEEILVDCSGEDGQEKTPDT 1187
              QYLFVTATLP  +Y+KLVEVFPDCE+IMGPGMHRISSRLEE+LVDCSG+DG EKTP++
Sbjct: 425  TMQYLFVTATLPVGIYNKLVEVFPDCEVIMGPGMHRISSRLEEVLVDCSGDDGTEKTPES 484

Query: 1188 AFLNKKAALLQLAGERPVPRTIVFCNKIETCRKVENALKRIDKKGSRIQVLPFHAAMTQE 1367
            AFLNKK+ALLQL    PV RTIVFCNKIETCRKVEN LK  D+KG R++VL FHAA+TQE
Sbjct: 485  AFLNKKSALLQLVEGSPVSRTIVFCNKIETCRKVENVLKHFDRKGVRLRVLAFHAALTQE 544

Query: 1368 SRLASMKEFARPPSKSISQFMICTDRASRGIDFAGVDHVILFDFPREPSEYXXXXXXXXX 1547
            SRLA++KEF    S+ +S F++CTDRASRGIDFA VDHV+LFDFPR+PSEY         
Sbjct: 545  SRLANLKEFLNSHSEGVSLFLVCTDRASRGIDFAKVDHVVLFDFPRDPSEYVRRVGRTAR 604

Query: 1548 XXXXXXKAFIFVVGKQVSLARKIMERNRKGHPLHDVPSAY 1667
                  KAF++VVGKQVSLAR+I+ERN+KGHPLH+VPSAY
Sbjct: 605  GAGGKGKAFVYVVGKQVSLARRIIERNKKGHPLHNVPSAY 644


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