BLASTX nr result

ID: Glycyrrhiza24_contig00008420 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00008420
         (598 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001242489.1| uncharacterized protein LOC100807063 precurs...   158   2e-46
ref|XP_003610008.1| Xyloglucan endotransglucosylase/hydrolase [M...   150   2e-44
gb|AFK47685.1| unknown [Lotus japonicus]                              149   1e-42
ref|XP_002270299.1| PREDICTED: probable xyloglucan endotransgluc...   144   1e-41
ref|XP_003550636.1| PREDICTED: LOW QUALITY PROTEIN: probable xyl...   145   1e-41

>ref|NP_001242489.1| uncharacterized protein LOC100807063 precursor [Glycine max]
           gi|255640010|gb|ACU20296.1| unknown [Glycine max]
          Length = 283

 Score =  158 bits (399), Expect(2) = 2e-46
 Identities = 75/102 (73%), Positives = 81/102 (79%)
 Frame = -1

Query: 598 IREFKNLEPKGVAFPKNQAMRIYSSLYDADNWATRGGLVKTDWSQAPFTASYRNYNAQAC 419
           IREFKNLE KG +FPKNQ MRIYSSL++AD+WATRGGLVKTDWSQAPFTASYR +NAQAC
Sbjct: 160 IREFKNLESKGASFPKNQPMRIYSSLWNADDWATRGGLVKTDWSQAPFTASYRKFNAQAC 219

Query: 418 VWTXXXXXXXXXXXXXXXXSWLKQSLDGTGQARIQWVQKNYM 293
           VWT                +WLKQSLD TGQARIQWVQKNYM
Sbjct: 220 VWTSSSGSSCSSNNPSSNQAWLKQSLDSTGQARIQWVQKNYM 261



 Score = 53.5 bits (127), Expect(2) = 2e-46
 Identities = 21/24 (87%), Positives = 22/24 (91%)
 Frame = -3

Query: 209 YMIYNYCTDAKRFPQGLPPECKLA 138
           YMIYNYCTD KRFPQGLPPEC +A
Sbjct: 260 YMIYNYCTDTKRFPQGLPPECTIA 283


>ref|XP_003610008.1| Xyloglucan endotransglucosylase/hydrolase [Medicago truncatula]
           gi|355511063|gb|AES92205.1| Xyloglucan
           endotransglucosylase/hydrolase [Medicago truncatula]
          Length = 284

 Score =  150 bits (379), Expect(2) = 2e-44
 Identities = 73/102 (71%), Positives = 79/102 (77%)
 Frame = -1

Query: 598 IREFKNLEPKGVAFPKNQAMRIYSSLYDADNWATRGGLVKTDWSQAPFTASYRNYNAQAC 419
           +REFKNLE KG+ FPK+QAM IYSSL+DADNWATRGGL KTDWSQAPFTASY N+N QAC
Sbjct: 162 LREFKNLESKGIPFPKSQAMSIYSSLWDADNWATRGGLAKTDWSQAPFTASYGNFNIQAC 221

Query: 418 VWTXXXXXXXXXXXXXXXXSWLKQSLDGTGQARIQWVQKNYM 293
           VWT                SW+KQSLD TGQARIQWVQKNYM
Sbjct: 222 VWT-SSGSSCSSKNPSSNHSWMKQSLDSTGQARIQWVQKNYM 262



 Score = 54.7 bits (130), Expect(2) = 2e-44
 Identities = 22/24 (91%), Positives = 22/24 (91%)
 Frame = -3

Query: 209 YMIYNYCTDAKRFPQGLPPECKLA 138
           YMIYNYCTD KRFPQGLPPEC LA
Sbjct: 261 YMIYNYCTDTKRFPQGLPPECSLA 284


>gb|AFK47685.1| unknown [Lotus japonicus]
          Length = 278

 Score =  149 bits (375), Expect(2) = 1e-42
 Identities = 72/102 (70%), Positives = 82/102 (80%)
 Frame = -1

Query: 598 IREFKNLEPKGVAFPKNQAMRIYSSLYDADNWATRGGLVKTDWSQAPFTASYRNYNAQAC 419
           IR+F NLE KGVAFPK QAMRI+SSL++AD+WATRGGLVKTDWSQAPFTASY+++NAQAC
Sbjct: 160 IRQFNNLESKGVAFPKKQAMRIFSSLWNADDWATRGGLVKTDWSQAPFTASYKSFNAQAC 219

Query: 418 VWTXXXXXXXXXXXXXXXXSWLKQSLDGTGQARIQWVQKNYM 293
           VWT                SW+K+SLD TGQARIQWVQKNYM
Sbjct: 220 VWT-----SSGSSCSSNQDSWMKESLDSTGQARIQWVQKNYM 256



 Score = 50.1 bits (118), Expect(2) = 1e-42
 Identities = 19/24 (79%), Positives = 20/24 (83%)
 Frame = -3

Query: 209 YMIYNYCTDAKRFPQGLPPECKLA 138
           YMIYNYCTD K FPQG PPEC +A
Sbjct: 255 YMIYNYCTDTKSFPQGFPPECSIA 278


>ref|XP_002270299.1| PREDICTED: probable xyloglucan endotransglucosylase/hydrolase
           protein 23 [Vitis vinifera]
          Length = 285

 Score =  144 bits (362), Expect(2) = 1e-41
 Identities = 66/102 (64%), Positives = 78/102 (76%)
 Frame = -1

Query: 598 IREFKNLEPKGVAFPKNQAMRIYSSLYDADNWATRGGLVKTDWSQAPFTASYRNYNAQAC 419
           IR+FKNLE KGVA+PKNQ MRIYSSL++AD+WATRGGLVKTDWSQAPFTASYRN+NA AC
Sbjct: 159 IRQFKNLESKGVAYPKNQPMRIYSSLWNADDWATRGGLVKTDWSQAPFTASYRNFNANAC 218

Query: 418 VWTXXXXXXXXXXXXXXXXSWLKQSLDGTGQARIQWVQKNYM 293
           VW+                +WL Q LD + Q +++WVQKNYM
Sbjct: 219 VWSSGSSSCSKNSSSTTSNAWLYQELDSSSQEKLKWVQKNYM 260



 Score = 51.6 bits (122), Expect(2) = 1e-41
 Identities = 20/21 (95%), Positives = 20/21 (95%)
 Frame = -3

Query: 209 YMIYNYCTDAKRFPQGLPPEC 147
           YMIYNYCTD KRFPQGLPPEC
Sbjct: 259 YMIYNYCTDTKRFPQGLPPEC 279


>ref|XP_003550636.1| PREDICTED: LOW QUALITY PROTEIN: probable xyloglucan
           endotransglucosylase/hydrolase protein 23-like [Glycine
           max]
          Length = 234

 Score =  145 bits (366), Expect(2) = 1e-41
 Identities = 71/102 (69%), Positives = 79/102 (77%)
 Frame = -1

Query: 598 IREFKNLEPKGVAFPKNQAMRIYSSLYDADNWATRGGLVKTDWSQAPFTASYRNYNAQAC 419
           IREFK+LE KGV+FPKNQAMRI+SSL++ D+WATRGGLVKTDWSQAPFTASYRN+NAQA 
Sbjct: 111 IREFKDLESKGVSFPKNQAMRIFSSLWNLDDWATRGGLVKTDWSQAPFTASYRNFNAQAV 170

Query: 418 VWTXXXXXXXXXXXXXXXXSWLKQSLDGTGQARIQWVQKNYM 293
                              +WLKQSLD TGQARIQWVQKNYM
Sbjct: 171 FGLSSGSSCSSNNNPSSNQAWLKQSLDATGQARIQWVQKNYM 212



 Score = 50.1 bits (118), Expect(2) = 1e-41
 Identities = 20/24 (83%), Positives = 21/24 (87%)
 Frame = -3

Query: 209 YMIYNYCTDAKRFPQGLPPECKLA 138
           YMIYNYCTD KRFPQGL PEC +A
Sbjct: 211 YMIYNYCTDTKRFPQGLHPECTIA 234


Top