BLASTX nr result

ID: Glycyrrhiza24_contig00008419 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00008419
         (1558 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001236615.1| Dof6 transcription factor [Glycine max] gi|1...   321   4e-85
ref|XP_003593557.1| Dof zinc finger protein [Medicago truncatula...   318   2e-84
ref|XP_003545886.1| PREDICTED: dof zinc finger protein DOF5.3-li...   309   1e-81
ref|XP_003542768.1| PREDICTED: uncharacterized protein LOC100791...   296   8e-78
ref|XP_003529308.1| PREDICTED: uncharacterized protein LOC100818...   293   7e-77

>ref|NP_001236615.1| Dof6 transcription factor [Glycine max] gi|146674816|gb|ABQ42347.1|
            Dof6 transcription factor [Glycine max]
          Length = 291

 Score =  321 bits (822), Expect = 4e-85
 Identities = 192/315 (60%), Positives = 208/315 (66%), Gaps = 20/315 (6%)
 Frame = +1

Query: 343  LSSKQVSNRGLDWNQTLLQAQDLELPKPTLMRKXXXXXXXXXSEPLKCPRCDSTNTKFCY 522
            LSSKQVSNRGLDWNQTLL+AQ+LELPKP  MRK         SEPLKCPRCDS NTKFCY
Sbjct: 3    LSSKQVSNRGLDWNQTLLEAQNLELPKPPPMRKQQQQTQP--SEPLKCPRCDSINTKFCY 60

Query: 523  YNNYNKSQPRHFCRACKRHWTKGGTLRNVPVGGGRKNKRVIKK-------XXXXXXXXXX 681
            YNNYNKSQPRH+CRACKRHWTKGGTLRNVPVGGGRKNKRV K                  
Sbjct: 61   YNNYNKSQPRHYCRACKRHWTKGGTLRNVPVGGGRKNKRVKKSTTPNTATATNSISTTTT 120

Query: 682  XGNINMDVSELGAHMTIQTPHQRSQNLSAVGDQKNTPLPSSLYQSLIHHPPPLVPQQNLM 861
              N NMD  EL   +TI         L AV D K T  PSSLYQSL       +PQQNLM
Sbjct: 121  TSNTNMD-GELNTPITIP--------LFAVDDHKTT--PSSLYQSL------CLPQQNLM 163

Query: 862  SNXXXXXXXXXXXXIGNGIFLSSAVPFPQQNQTPLFPFST-------------SLRSSNV 1002
             +            IGNGIFLSS VPFP Q+Q+ LFPF+T             SLRSS+V
Sbjct: 164  VS-TKDSEEGKDFGIGNGIFLSSTVPFP-QSQSLLFPFTTSNSFDTNQCAISSSLRSSSV 221

Query: 1003 YNYGEEEINKIVEEPTINNNIMPSSTSGTITQPWEIPAXXXXXXAMLGTSNYWSWEDIDS 1182
            YNYGEE   KI EEPTI N+IMP+++ GT TQPWEI A      + L  SNYW+WEDIDS
Sbjct: 222  YNYGEE--FKITEEPTI-NSIMPNASGGTNTQPWEIAA----TSSGLEMSNYWTWEDIDS 274

Query: 1183 LVSTDLNVPWDDSDI 1227
            LVSTDLNVPWDDSDI
Sbjct: 275  LVSTDLNVPWDDSDI 289


>ref|XP_003593557.1| Dof zinc finger protein [Medicago truncatula]
            gi|355482605|gb|AES63808.1| Dof zinc finger protein
            [Medicago truncatula]
          Length = 274

 Score =  318 bits (815), Expect = 2e-84
 Identities = 180/298 (60%), Positives = 208/298 (69%), Gaps = 3/298 (1%)
 Frame = +1

Query: 343  LSSKQVSNRGLDWNQTLLQAQDLELPKPTLMRKXXXXXXXXXSEPLKCPRCDSTNTKFCY 522
            LSSKQVS+RG+DWNQTLLQ Q+LELPK   MRK          E + CPRCDSTNTKFCY
Sbjct: 3    LSSKQVSSRGVDWNQTLLQDQNLELPKTLPMRKQQQQNHQL--EAVNCPRCDSTNTKFCY 60

Query: 523  YNNYNKSQPRHFCRACKRHWTKGGTLRNVPVGGGRKNKRVIKKXXXXXXXXXXXGNINMD 702
            YNNYNKSQPRHFCRACKRHWTKGGTLRNVPVGG RKNKRV                I+  
Sbjct: 61   YNNYNKSQPRHFCRACKRHWTKGGTLRNVPVGGVRKNKRV---------------KISTS 105

Query: 703  VSELGAHMTIQTPHQRSQNLSAVGDQKNTPLPSSLYQSLIHHPPPLVPQQNLMSNXXXXX 882
            +S   +  TI T    + N + + ++KNT  PSS+++SLI HPP  +P QNL+S      
Sbjct: 106  ISTT-SKTTISTSFTTTSNANRL-NKKNT--PSSMHESLI-HPPSFLPPQNLISTKDQSE 160

Query: 883  XXXXXXXIGNGIFLSSAVPFPQQNQTPLFPFSTS--LRSSNVYNYGEEEINKIVEEPTIN 1056
                   IGNG+FLSS++PF  QNQ+ +FPFS S  LRS+N YNYG+EE  KI+EE TIN
Sbjct: 161  GNNEEFGIGNGMFLSSSMPF-HQNQSFIFPFSNSSTLRSNNGYNYGDEEF-KIMEESTIN 218

Query: 1057 NNIMPS-STSGTITQPWEIPAXXXXXXAMLGTSNYWSWEDIDSLVSTDLNVPWDDSDI 1227
            N+ MPS S SGTITQPWEIPA      + +  SNYWSWEDIDSLVSTDLNVPWDDSDI
Sbjct: 219  NSAMPSTSGSGTITQPWEIPA----TSSGMDMSNYWSWEDIDSLVSTDLNVPWDDSDI 272


>ref|XP_003545886.1| PREDICTED: dof zinc finger protein DOF5.3-like [Glycine max]
          Length = 285

 Score =  309 bits (791), Expect = 1e-81
 Identities = 184/311 (59%), Positives = 203/311 (65%), Gaps = 16/311 (5%)
 Frame = +1

Query: 343  LSSKQVSNRGLDWNQTLLQAQDLELPKPTLMRKXXXXXXXXXSEPLKCPRCDSTNTKFCY 522
            LSSKQVSNRGLDWNQTLLQAQ+LELP P  MRK         SEPLKCPRCDS NTKFCY
Sbjct: 3    LSSKQVSNRGLDWNQTLLQAQNLELPNPPPMRKQQQTQP---SEPLKCPRCDSINTKFCY 59

Query: 523  YNNYNKSQPRHFCRACKRHWTKGGTLRNVPVGGGRKNKRVIKK---XXXXXXXXXXXGNI 693
            YNNYNKSQPRH+CRACKRHWTKGGTLRNVPVGGGRKNKRV K                N 
Sbjct: 60   YNNYNKSQPRHYCRACKRHWTKGGTLRNVPVGGGRKNKRVKKSTTPAIATTSISTSTSNA 119

Query: 694  NMDVSELGAHMTIQTPHQRSQNLSAVGDQKNTPLPSSLYQSLIHHPPPLVPQQNLMSNXX 873
            NMD  EL   +TI +         AV D K T  PSSLYQ +       +PQQNLMS   
Sbjct: 120  NMD-GELNNPITIPS--------LAVDDHKTT--PSSLYQYV------CLPQQNLMST-- 160

Query: 874  XXXXXXXXXXIGNGIFLSSAVPFPQQNQTPLFPFST-------------SLRSSNVYNYG 1014
                      IGNGIFLSS VPFP Q+Q+ LFPF+T             S RSS+VYNYG
Sbjct: 161  KDSEEGKDFGIGNGIFLSSTVPFP-QSQSLLFPFTTSNSFDPNLCAISSSFRSSSVYNYG 219

Query: 1015 EEEINKIVEEPTINNNIMPSSTSGTITQPWEIPAXXXXXXAMLGTSNYWSWEDIDSLVST 1194
            EE   KI+EEPT+ N+IMP+++  T TQPWEI A      + +  SNYW+WEDIDS VST
Sbjct: 220  EE--FKIMEEPTL-NSIMPNTSGSTNTQPWEIAA----TSSGMEMSNYWTWEDIDSFVST 272

Query: 1195 DLNVPWDDSDI 1227
            D NVPWDDSDI
Sbjct: 273  DPNVPWDDSDI 283


>ref|XP_003542768.1| PREDICTED: uncharacterized protein LOC100791855 [Glycine max]
          Length = 336

 Score =  296 bits (759), Expect = 8e-78
 Identities = 182/345 (52%), Positives = 203/345 (58%), Gaps = 50/345 (14%)
 Frame = +1

Query: 343  LSSKQVSNRGLDWNQTLLQAQDLELPKPTLMRKXXXXXXXXX---SEPLKCPRCDSTNTK 513
            LSSKQVS+ GLDW QTLL+AQ+LELPKP LMRK            SE LKCPRCDSTNTK
Sbjct: 3    LSSKQVSSSGLDWKQTLLEAQNLELPKPNLMRKQQQQQQQQTQPNSESLKCPRCDSTNTK 62

Query: 514  FCYYNNYNKSQPRHFCRACKRHWTKGGTLRNVPVGGGRKNKRVIKK-------------- 651
            FCYYNNYNKSQPRHFCRACKRHWTKGGTLRNVPVGGGRKNKRV K               
Sbjct: 63   FCYYNNYNKSQPRHFCRACKRHWTKGGTLRNVPVGGGRKNKRVRKSITTPITTSSTTTSI 122

Query: 652  ------XXXXXXXXXXXGNINMD-VSELGAHMTIQTPHQRSQNLSAVGDQKNTPLPSSLY 810
                              N NMD +    +HMTIQTP           D KN  + SSLY
Sbjct: 123  TTTTSTCTATVTTSIGNNNNNMDAMLGCNSHMTIQTP--------LADDHKN--MSSSLY 172

Query: 811  QSLIHHPPPLVPQQNLMSNXXXXXXXXXXXXIG---NGIFLSSAVPFP--QQNQTPLFPF 975
            Q+LI  PP L+ QQNLM+N            IG   NGIF S  +PFP   Q+Q+ LFPF
Sbjct: 173  QALIRPPPLLLQQQNLMNNTRDLEGKDFGIGIGNGNNGIFPSLTLPFPIHHQSQSLLFPF 232

Query: 976  ---------------STSLRSSNVYNYGEEEINKIVEEPTINNNIMPSS---TSGTITQP 1101
                           STSLRSSNVYNYGE++  K +EEPTIN+ I  ++   ++     P
Sbjct: 233  STSSSSFDTNPCSVVSTSLRSSNVYNYGEDQF-KAIEEPTINSTITTTTIVPSTNNTHHP 291

Query: 1102 WEIPAXXXXXXAMLGT---SNYWSWEDIDSLVSTDLNVPWDDSDI 1227
            WEI A        LGT   SNYW+WED DSLVSTDL  PWD SDI
Sbjct: 292  WEIAAATSGVG--LGTSSNSNYWNWEDFDSLVSTDLKDPWDGSDI 334


>ref|XP_003529308.1| PREDICTED: uncharacterized protein LOC100818111 [Glycine max]
          Length = 332

 Score =  293 bits (751), Expect = 7e-77
 Identities = 187/344 (54%), Positives = 206/344 (59%), Gaps = 49/344 (14%)
 Frame = +1

Query: 343  LSSKQVSNRGLDWNQTLLQAQDLELPKPTLMRKXXXXXXXXX------SEPLKCPRCDST 504
            LSSKQVS+ GLDW QTLL+AQ+LELPKP LMRK               SE LKCPRCDST
Sbjct: 3    LSSKQVSSSGLDWKQTLLEAQNLELPKPNLMRKQQQQQQQQQQQTQPNSESLKCPRCDST 62

Query: 505  NTKFCYYNNYNKSQPRHFCRACKRHWTKGGTLRNVPVGGGRKNKRVIKKXXXXXXXXXXX 684
            NTKFCYYNNYNKSQPRHFCRACKRHWTKGGTLRNVPVGGGRKNKRV K            
Sbjct: 63   NTKFCYYNNYNKSQPRHFCRACKRHWTKGGTLRNVPVGGGRKNKRVKKSITPITTSSTTT 122

Query: 685  GNI-----------------NMDVSELG--AHMTIQTPHQRSQNLSAVGDQKNTPLPSSL 807
              I                 NMD + LG  +HMTIQTP           DQKN  + SSL
Sbjct: 123  TPITTATSTCTATVTTSIGNNMD-AMLGCYSHMTIQTP--------LADDQKN--MSSSL 171

Query: 808  YQSLIHHPPPLVPQQNLMSNXXXXXXXXXXXXIGNGIFLSSAVPFP-QQNQTPLFPF--- 975
            YQ+LI  PPPL+ QQNL++               NGIF SS +  P  Q+Q+ LFPF   
Sbjct: 172  YQALI-RPPPLLLQQNLLNTRELEGKDFGIGIGNNGIFPSSTLALPTHQSQSLLFPFSAS 230

Query: 976  ------------STSLRSSNVYNYGEEEINKIVEEPTINN---NIMPSSTSGT--ITQPW 1104
                        STSLRSSNVYNYGE++  K +EEPTIN+    I+P ST GT     PW
Sbjct: 231  SRSFDTNPCSVVSTSLRSSNVYNYGEDQF-KAIEEPTINSTTATIVP-STGGTNNTHHPW 288

Query: 1105 EIPAXXXXXXAMLGT---SNYWSWEDIDSLVSTDLNVPWDDSDI 1227
            EI A        LGT   SNYW+WED DSLVSTDL  PWDDSDI
Sbjct: 289  EIAAATSGVG--LGTSSNSNYWNWEDFDSLVSTDLKDPWDDSDI 330


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