BLASTX nr result

ID: Glycyrrhiza24_contig00008416 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00008416
         (690 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003621837.1| hypothetical protein MTR_7g024000 [Medicago ...   333   2e-89
ref|XP_002528445.1| hypothetical protein RCOM_0464910 [Ricinus c...   122   5e-26
ref|XP_002279244.2| PREDICTED: uncharacterized protein LOC100253...   119   7e-25
emb|CBI31708.3| unnamed protein product [Vitis vinifera]              108   8e-22
ref|XP_002879807.1| binding protein [Arabidopsis lyrata subsp. l...    87   4e-15

>ref|XP_003621837.1| hypothetical protein MTR_7g024000 [Medicago truncatula]
            gi|355496852|gb|AES78055.1| hypothetical protein
            MTR_7g024000 [Medicago truncatula]
          Length = 1723

 Score =  333 bits (854), Expect = 2e-89
 Identities = 162/229 (70%), Positives = 187/229 (81%)
 Frame = +3

Query: 3    GTRAMKRSSPCNNIEPAAERGAENEVGSEKSQVHHVVAPLSRAEDNDLRGVERQERNIYL 182
            G RA K + PCNN E  AE GAENEVGSEK++VHH   PL  AE+NDL+G ER+ERNI++
Sbjct: 674  GKRAKKSNIPCNNFE-TAEPGAENEVGSEKNRVHHGTVPLINAENNDLKGNERKERNIHM 732

Query: 183  DSNEIQSRQNTGGNSLSANCSAGSGDQGDLPFQGHHSTNTMNIPPLIFRSAFSELREMSP 362
            DS+EIQS+QN G N+++ NCSAG GDQGD+P Q +HSTN +NIPPLIFRSAFSELREMSP
Sbjct: 733  DSDEIQSQQNIGANTVNTNCSAGLGDQGDMPSQVYHSTNPVNIPPLIFRSAFSELREMSP 792

Query: 363  FNSKQLPNKNKFIYNYDGQNENAACLISDATKWNNMLAISTPVTIGNLLSEESSYGCTPA 542
            F+  QLPN+NK  ++ DGQ++NA CL SD  K  +MLAIS  VTIGN LSEE SYGC+P 
Sbjct: 793  FSLNQLPNQNKSGHDNDGQSQNATCLSSDEAK-RSMLAISMAVTIGNSLSEEGSYGCSPE 851

Query: 543  VDPFWPLCMYELRGKCNNDECPWQHTKDYGDDSNIYQHQHTDSNNADSQ 689
            VDPFWPLCMYELRGKCNNDECPWQH KDYG D NI QHQHTD+NN DSQ
Sbjct: 852  VDPFWPLCMYELRGKCNNDECPWQHAKDYG-DGNITQHQHTDTNNGDSQ 899


>ref|XP_002528445.1| hypothetical protein RCOM_0464910 [Ricinus communis]
            gi|223532121|gb|EEF33928.1| hypothetical protein
            RCOM_0464910 [Ricinus communis]
          Length = 1707

 Score =  122 bits (307), Expect = 5e-26
 Identities = 78/241 (32%), Positives = 118/241 (48%), Gaps = 12/241 (4%)
 Frame = +3

Query: 3    GTRAMKRSSPCNNIEPAAERGAENEVGSEKSQVHH---VVAPLSRAEDNDLRGVERQERN 173
            G R + ++S   N++PA E G EN+ GSE++Q  +   +V+   R ++ DL G ++ ERN
Sbjct: 763  GRRNLSKNSSSLNLDPADELGTENDNGSERTQTSNGSFLVSEEERNQEFDLGGNDQHERN 822

Query: 174  IYLDSNEIQSRQNTGGNSLSANCSAGSGDQGDLPFQGHHSTNTMNIPPLIFRSAFSELRE 353
            I      IQ+++       S  C              H S   +  P L+ RSAF  +++
Sbjct: 823  ISGVPVNIQNQKKNDDEYFSI-C--------------HLSATIIYSPNLVLRSAFGHMKD 867

Query: 354  MSPFNSKQLPNKNKFIYNYDGQNENAACLISDATKWNNMLAISTPVTIGNLLSEES---- 521
                 S    ++            +  C  +D     N   I   +TI N + E +    
Sbjct: 868  TFALTSTGFQSQKS--------ERDDTCDCNDEAGSINTEEIDHGITIANPMEESAKDVC 919

Query: 522  -----SYGCTPAVDPFWPLCMYELRGKCNNDECPWQHTKDYGDDSNIYQHQHTDSNNADS 686
                 S+ C   VDPFWPLCMYELRGKCNND+CPWQH +D+  + N+ +HQH  S+++D 
Sbjct: 920  GNDFGSFTCNFIVDPFWPLCMYELRGKCNNDQCPWQHVRDF-SNGNVGKHQHDTSDSSDC 978

Query: 687  Q 689
            Q
Sbjct: 979  Q 979


>ref|XP_002279244.2| PREDICTED: uncharacterized protein LOC100253034 [Vitis vinifera]
          Length = 2115

 Score =  119 bits (297), Expect = 7e-25
 Identities = 85/232 (36%), Positives = 120/232 (51%), Gaps = 9/232 (3%)
 Frame = +3

Query: 3    GTRAMKRSSPCN-NIEPAAERGAENEVGSEKSQVHHVVAPLSRAEDN---DLRGVERQER 170
            G R + ++S  + +IEPA +R  E+ VG +K+Q+     P S AE     DL G  R E 
Sbjct: 785  GVRTLSKNSGHDYDIEPAVDREVEDNVGRDKTQMRMRNIPFSDAEKTQQLDLGGAGRPET 844

Query: 171  NIYLDSNEI--QSRQNTGGNSLSANCSAGSGDQGDL--PFQGHHSTNTMNI-PPLIFRSA 335
            +I     EI  Q  +   GN    N    + D  D     + H ST ++   PP + RSA
Sbjct: 845  SISEIPVEIDRQCYEKFSGN----NEFQPTDDPKDKFSKREVHQSTTSVTFSPPFVLRSA 900

Query: 336  FSELREMSPFNSKQLPNKNKFIYNYDGQNENAACLISDATKWNNMLAISTPVTIGNLLSE 515
            F  ++  S  +S  L  +++     +  NE    + S+    +   A ST  T+ +   E
Sbjct: 901  FGHMKVTSLISSLGLHTRDQQNGIDNAYNEEDVSVRSNKILPSVWTASSTLDTVRDGFGE 960

Query: 516  ESSYGCTPAVDPFWPLCMYELRGKCNNDECPWQHTKDYGDDSNIYQHQHTDS 671
              SY C  AVDPFWPLCMYELRGKCNN+EC WQH KDY  ++N+ QH  +D+
Sbjct: 961  AGSYTCNLAVDPFWPLCMYELRGKCNNEECVWQHVKDY-TNNNMNQHDESDN 1011


>emb|CBI31708.3| unnamed protein product [Vitis vinifera]
          Length = 1570

 Score =  108 bits (271), Expect = 8e-22
 Identities = 82/236 (34%), Positives = 110/236 (46%), Gaps = 9/236 (3%)
 Frame = +3

Query: 3    GTRAMKRSSPCN-NIEPAAERGAENEVGSEKSQVHHVVAPLSRAEDN---DLRGVERQER 170
            G R + ++S  + +IEPA +R  E+ VG +K+Q+     P S AE     DL G  R E 
Sbjct: 686  GVRTLSKNSGHDYDIEPAVDREVEDNVGRDKTQMRMRNIPFSDAEKTQQLDLGGAGRPET 745

Query: 171  NIYLDSNEI--QSRQNTGGNSLSANCSAGSGDQGDL--PFQGHHSTNTMNI-PPLIFRSA 335
            +I     EI  Q  +   GN    N    + D  D     + H ST ++   PP + RSA
Sbjct: 746  SISEIPVEIDRQCYEKFSGN----NEFQPTDDPKDKFSKREVHQSTTSVTFSPPFVLRSA 801

Query: 336  FSELREMSPFNSKQLPNKNKFIYNYDGQNENAACLISDATKWNNMLAISTPVTIGNLLSE 515
            F  ++  S                                    ++  ST  T+ +   E
Sbjct: 802  FGHMKVTS------------------------------------LITSSTLDTVRDGFGE 825

Query: 516  ESSYGCTPAVDPFWPLCMYELRGKCNNDECPWQHTKDYGDDSNIYQHQHTDSNNAD 683
              SY C  AVDPFWPLCMYELRGKCNN+EC WQH KDY   +N   +QH +S+NAD
Sbjct: 826  AGSYTCNLAVDPFWPLCMYELRGKCNNEECVWQHVKDY---TNNNMNQHDESDNAD 878


>ref|XP_002879807.1| binding protein [Arabidopsis lyrata subsp. lyrata]
            gi|297325646|gb|EFH56066.1| binding protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 1566

 Score = 86.7 bits (213), Expect = 4e-15
 Identities = 67/233 (28%), Positives = 102/233 (43%), Gaps = 13/233 (5%)
 Frame = +3

Query: 3    GTRAMKRSSPCNNIEPAAERGAENEVGSEKSQVHHVVAPLSRAEDNDLRGVERQERNIYL 182
            G RA  +   C N E   +RG E +V SE++Q                    R + + + 
Sbjct: 632  GMRAESKGVTCFNGETVIDRGDERDVASERTQ--------------------RDDGSPFS 671

Query: 183  DSNEIQSRQNTGGNSLSANCSAGSGD-------QGDLPFQGHHST------NTMNIPPLI 323
            +  +    +  G N L  N S    +       Q  +  + H S+      +++ +   +
Sbjct: 672  EIYQHNDSREPGANKLQGNPSEAPVERRSIEEFQSSVDMESHRSSPENDLLSSVALSGPL 731

Query: 324  FRSAFSELREMSPFNSKQLPNKNKFIYNYDGQNENAACLISDATKWNNMLAISTPVTIGN 503
            FRS    L+      +   P        Y  QN++ + L SD  +  ++    T  T+  
Sbjct: 732  FRSTIYHLKVPGSSITSLGPE-------YTLQNKSYS-LYSDKRQCRSL----TQTTVYE 779

Query: 504  LLSEESSYGCTPAVDPFWPLCMYELRGKCNNDECPWQHTKDYGDDSNIYQHQH 662
              ++   Y C   VDP WPLCMYELRG+CNNDECPWQH KD+ DDS ++Q  H
Sbjct: 780  --TKIGCYTCNLKVDPSWPLCMYELRGRCNNDECPWQHFKDFSDDS-LHQSLH 829


Top