BLASTX nr result

ID: Glycyrrhiza24_contig00008413 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00008413
         (357 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK38005.1| unknown [Medicago truncatula]                           97   2e-18
gb|ACJ84873.1| unknown [Medicago truncatula]                           97   2e-18
ref|XP_003531707.1| PREDICTED: peptide deformylase 1A, chloropla...    94   2e-17
ref|XP_004156807.1| PREDICTED: peptide deformylase 1A, chloropla...    78   9e-13
ref|XP_004156806.1| PREDICTED: peptide deformylase 1A, chloropla...    78   9e-13

>gb|AFK38005.1| unknown [Medicago truncatula]
          Length = 267

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 62/114 (54%), Positives = 72/114 (63%), Gaps = 4/114 (3%)
 Frame = -2

Query: 332 EAMEALHLQRVLLIFVAKNSLFKLPTATP--LCRFTMXXXXXXXXXXXXXXXXXXXXXXX 159
           +AMEALHL+ +L +   KNSLF L T TP  L  F+                        
Sbjct: 2   KAMEALHLRCILPLSRTKNSLFTLQTTTPFSLSPFS-KPPPLTLTLSSSSSQNATIRTRA 60

Query: 158 GWFLGLTED--KKKKMNLPETVKAGDPVLHEPAQEVVPSEIKSEKVQKIIDDMI 3
           G+F G T+D  KKKKM+LP+TVKAGDPVLHEPAQEV PSEI S+KVQKIIDDMI
Sbjct: 61  GFFFGRTKDDKKKKKMDLPDTVKAGDPVLHEPAQEVDPSEIMSDKVQKIIDDMI 114


>gb|ACJ84873.1| unknown [Medicago truncatula]
          Length = 241

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 62/114 (54%), Positives = 72/114 (63%), Gaps = 4/114 (3%)
 Frame = -2

Query: 332 EAMEALHLQRVLLIFVAKNSLFKLPTATP--LCRFTMXXXXXXXXXXXXXXXXXXXXXXX 159
           +AMEALHL+ +L +   KNSLF L T TP  L  F+                        
Sbjct: 2   KAMEALHLRCILPLSRTKNSLFTLQTTTPFSLSPFS-KPPPLTLTLSSSSSQNATIRTRA 60

Query: 158 GWFLGLTED--KKKKMNLPETVKAGDPVLHEPAQEVVPSEIKSEKVQKIIDDMI 3
           G+F G T+D  KKKKM+LP+TVKAGDPVLHEPAQEV PSEI S+KVQKIIDDMI
Sbjct: 61  GFFFGRTKDDKKKKKMDLPDTVKAGDPVLHEPAQEVDPSEIMSDKVQKIIDDMI 114


>ref|XP_003531707.1| PREDICTED: peptide deformylase 1A, chloroplastic-like [Glycine max]
          Length = 252

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 58/109 (53%), Positives = 66/109 (60%), Gaps = 1/109 (0%)
 Frame = -2

Query: 326 MEALHLQRVLLIFVA-KNSLFKLPTATPLCRFTMXXXXXXXXXXXXXXXXXXXXXXXGWF 150
           MEALHL RVLL+ V+ K S+F   + TPL                             WF
Sbjct: 1   MEALHLHRVLLMPVSQKTSIFLRASGTPLSTLARPPLRWSSQTCSARAG---------WF 51

Query: 149 LGLTEDKKKKMNLPETVKAGDPVLHEPAQEVVPSEIKSEKVQKIIDDMI 3
           LGL  D KK  NLP+TVKAGDPVLHEPAQ+V P+EIKSE+VQKIIDDMI
Sbjct: 52  LGLGADSKKT-NLPDTVKAGDPVLHEPAQDVDPNEIKSERVQKIIDDMI 99


>ref|XP_004156807.1| PREDICTED: peptide deformylase 1A, chloroplastic-like isoform 2
           [Cucumis sativus]
          Length = 237

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 40/51 (78%), Positives = 43/51 (84%)
 Frame = -2

Query: 155 WFLGLTEDKKKKMNLPETVKAGDPVLHEPAQEVVPSEIKSEKVQKIIDDMI 3
           WFLGL E  +KKM+LP  VKAGDPVLHEPA+EV P EI SEKVQKIIDDMI
Sbjct: 66  WFLGLGE--QKKMSLPSIVKAGDPVLHEPAREVDPKEIGSEKVQKIIDDMI 114


>ref|XP_004156806.1| PREDICTED: peptide deformylase 1A, chloroplastic-like isoform 1
           [Cucumis sativus]
          Length = 267

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 40/51 (78%), Positives = 43/51 (84%)
 Frame = -2

Query: 155 WFLGLTEDKKKKMNLPETVKAGDPVLHEPAQEVVPSEIKSEKVQKIIDDMI 3
           WFLGL E  +KKM+LP  VKAGDPVLHEPA+EV P EI SEKVQKIIDDMI
Sbjct: 66  WFLGLGE--QKKMSLPSIVKAGDPVLHEPAREVDPKEIGSEKVQKIIDDMI 114


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