BLASTX nr result
ID: Glycyrrhiza24_contig00008413
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza24_contig00008413 (357 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AFK38005.1| unknown [Medicago truncatula] 97 2e-18 gb|ACJ84873.1| unknown [Medicago truncatula] 97 2e-18 ref|XP_003531707.1| PREDICTED: peptide deformylase 1A, chloropla... 94 2e-17 ref|XP_004156807.1| PREDICTED: peptide deformylase 1A, chloropla... 78 9e-13 ref|XP_004156806.1| PREDICTED: peptide deformylase 1A, chloropla... 78 9e-13 >gb|AFK38005.1| unknown [Medicago truncatula] Length = 267 Score = 96.7 bits (239), Expect = 2e-18 Identities = 62/114 (54%), Positives = 72/114 (63%), Gaps = 4/114 (3%) Frame = -2 Query: 332 EAMEALHLQRVLLIFVAKNSLFKLPTATP--LCRFTMXXXXXXXXXXXXXXXXXXXXXXX 159 +AMEALHL+ +L + KNSLF L T TP L F+ Sbjct: 2 KAMEALHLRCILPLSRTKNSLFTLQTTTPFSLSPFS-KPPPLTLTLSSSSSQNATIRTRA 60 Query: 158 GWFLGLTED--KKKKMNLPETVKAGDPVLHEPAQEVVPSEIKSEKVQKIIDDMI 3 G+F G T+D KKKKM+LP+TVKAGDPVLHEPAQEV PSEI S+KVQKIIDDMI Sbjct: 61 GFFFGRTKDDKKKKKMDLPDTVKAGDPVLHEPAQEVDPSEIMSDKVQKIIDDMI 114 >gb|ACJ84873.1| unknown [Medicago truncatula] Length = 241 Score = 96.7 bits (239), Expect = 2e-18 Identities = 62/114 (54%), Positives = 72/114 (63%), Gaps = 4/114 (3%) Frame = -2 Query: 332 EAMEALHLQRVLLIFVAKNSLFKLPTATP--LCRFTMXXXXXXXXXXXXXXXXXXXXXXX 159 +AMEALHL+ +L + KNSLF L T TP L F+ Sbjct: 2 KAMEALHLRCILPLSRTKNSLFTLQTTTPFSLSPFS-KPPPLTLTLSSSSSQNATIRTRA 60 Query: 158 GWFLGLTED--KKKKMNLPETVKAGDPVLHEPAQEVVPSEIKSEKVQKIIDDMI 3 G+F G T+D KKKKM+LP+TVKAGDPVLHEPAQEV PSEI S+KVQKIIDDMI Sbjct: 61 GFFFGRTKDDKKKKKMDLPDTVKAGDPVLHEPAQEVDPSEIMSDKVQKIIDDMI 114 >ref|XP_003531707.1| PREDICTED: peptide deformylase 1A, chloroplastic-like [Glycine max] Length = 252 Score = 93.6 bits (231), Expect = 2e-17 Identities = 58/109 (53%), Positives = 66/109 (60%), Gaps = 1/109 (0%) Frame = -2 Query: 326 MEALHLQRVLLIFVA-KNSLFKLPTATPLCRFTMXXXXXXXXXXXXXXXXXXXXXXXGWF 150 MEALHL RVLL+ V+ K S+F + TPL WF Sbjct: 1 MEALHLHRVLLMPVSQKTSIFLRASGTPLSTLARPPLRWSSQTCSARAG---------WF 51 Query: 149 LGLTEDKKKKMNLPETVKAGDPVLHEPAQEVVPSEIKSEKVQKIIDDMI 3 LGL D KK NLP+TVKAGDPVLHEPAQ+V P+EIKSE+VQKIIDDMI Sbjct: 52 LGLGADSKKT-NLPDTVKAGDPVLHEPAQDVDPNEIKSERVQKIIDDMI 99 >ref|XP_004156807.1| PREDICTED: peptide deformylase 1A, chloroplastic-like isoform 2 [Cucumis sativus] Length = 237 Score = 77.8 bits (190), Expect = 9e-13 Identities = 40/51 (78%), Positives = 43/51 (84%) Frame = -2 Query: 155 WFLGLTEDKKKKMNLPETVKAGDPVLHEPAQEVVPSEIKSEKVQKIIDDMI 3 WFLGL E +KKM+LP VKAGDPVLHEPA+EV P EI SEKVQKIIDDMI Sbjct: 66 WFLGLGE--QKKMSLPSIVKAGDPVLHEPAREVDPKEIGSEKVQKIIDDMI 114 >ref|XP_004156806.1| PREDICTED: peptide deformylase 1A, chloroplastic-like isoform 1 [Cucumis sativus] Length = 267 Score = 77.8 bits (190), Expect = 9e-13 Identities = 40/51 (78%), Positives = 43/51 (84%) Frame = -2 Query: 155 WFLGLTEDKKKKMNLPETVKAGDPVLHEPAQEVVPSEIKSEKVQKIIDDMI 3 WFLGL E +KKM+LP VKAGDPVLHEPA+EV P EI SEKVQKIIDDMI Sbjct: 66 WFLGLGE--QKKMSLPSIVKAGDPVLHEPAREVDPKEIGSEKVQKIIDDMI 114