BLASTX nr result

ID: Glycyrrhiza24_contig00008409 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00008409
         (774 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003626220.1| 60S ribosomal protein L22-like protein [Medi...   179   6e-43
gb|AFK48844.1| unknown [Lotus japonicus]                              177   2e-42
ref|XP_003536065.1| PREDICTED: 60S ribosomal protein L22-2-like ...   177   2e-42
ref|NP_001234976.1| uncharacterized protein LOC100499714 [Glycin...   177   2e-42
ref|XP_002319510.1| predicted protein [Populus trichocarpa] gi|2...   177   2e-42

>ref|XP_003626220.1| 60S ribosomal protein L22-like protein [Medicago truncatula]
           gi|355501235|gb|AES82438.1| 60S ribosomal protein
           L22-like protein [Medicago truncatula]
           gi|388505472|gb|AFK40802.1| unknown [Medicago
           truncatula]
          Length = 124

 Score =  179 bits (454), Expect = 6e-43
 Identities = 96/124 (77%), Positives = 99/124 (79%)
 Frame = -1

Query: 678 MSRXXXXXXXXXXXXATFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVT 499
           MSR            ATFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSV+VT
Sbjct: 1   MSRGSAAGAKGKKKGATFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVSVT 60

Query: 498 RDKTKITVTSDSNFSXXXXXXXXXXXXXKHNVRDWLRVIASNKDRSIYELRYFNIAENEG 319
           R+K+KITVTSDSNFS             KHNVRDWLRVIASNKDRSIYELRYFNIAENEG
Sbjct: 61  REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRSIYELRYFNIAENEG 120

Query: 318 EEED 307
           EEED
Sbjct: 121 EEED 124


>gb|AFK48844.1| unknown [Lotus japonicus]
          Length = 124

 Score =  177 bits (450), Expect = 2e-42
 Identities = 93/124 (75%), Positives = 98/124 (79%)
 Frame = -1

Query: 678 MSRXXXXXXXXXXXXATFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVT 499
           MSR             +FTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGD+VTVT
Sbjct: 1   MSRGGVAGAKGKKKSVSFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDAVTVT 60

Query: 498 RDKTKITVTSDSNFSXXXXXXXXXXXXXKHNVRDWLRVIASNKDRSIYELRYFNIAENEG 319
           R+K+KITVTSDSNFS             KHNVRDWLRVIASNKDRS+YELRYFNIAENEG
Sbjct: 61  REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRSVYELRYFNIAENEG 120

Query: 318 EEED 307
           EEED
Sbjct: 121 EEED 124


>ref|XP_003536065.1| PREDICTED: 60S ribosomal protein L22-2-like [Glycine max]
          Length = 124

 Score =  177 bits (450), Expect = 2e-42
 Identities = 95/124 (76%), Positives = 97/124 (78%)
 Frame = -1

Query: 678 MSRXXXXXXXXXXXXATFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVT 499
           MSR            ATFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDS+TV 
Sbjct: 1   MSRGSATAAKGKKKGATFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSITVV 60

Query: 498 RDKTKITVTSDSNFSXXXXXXXXXXXXXKHNVRDWLRVIASNKDRSIYELRYFNIAENEG 319
           R+KTKI VTSDSNFS             KHNVRDWLRVIASNKDRSIYELRYFNIAENEG
Sbjct: 61  REKTKIIVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRSIYELRYFNIAENEG 120

Query: 318 EEED 307
           EEED
Sbjct: 121 EEED 124


>ref|NP_001234976.1| uncharacterized protein LOC100499714 [Glycine max]
           gi|255626013|gb|ACU13351.1| unknown [Glycine max]
          Length = 125

 Score =  177 bits (449), Expect = 2e-42
 Identities = 90/108 (83%), Positives = 93/108 (86%)
 Frame = -1

Query: 630 TFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVTRDKTKITVTSDSNFSX 451
           TFTIDCAKPVEDKIMDI SLEKFLQERIKVGGKAGALGDS+TVTR+KTKI VTSDSNFS 
Sbjct: 18  TFTIDCAKPVEDKIMDIVSLEKFLQERIKVGGKAGALGDSITVTREKTKIIVTSDSNFSK 77

Query: 450 XXXXXXXXXXXXKHNVRDWLRVIASNKDRSIYELRYFNIAENEGEEED 307
                       KHNVRDWLRVIASNKDRS+YELRYFNIAENEGEEED
Sbjct: 78  RYLKYLTKKYLKKHNVRDWLRVIASNKDRSVYELRYFNIAENEGEEED 125


>ref|XP_002319510.1| predicted protein [Populus trichocarpa] gi|222857886|gb|EEE95433.1|
           predicted protein [Populus trichocarpa]
          Length = 117

 Score =  177 bits (449), Expect = 2e-42
 Identities = 90/108 (83%), Positives = 94/108 (87%)
 Frame = -1

Query: 630 TFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVTRDKTKITVTSDSNFSX 451
           TFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGD+VTVTR+K KITVTSDSNFS 
Sbjct: 10  TFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDAVTVTREKNKITVTSDSNFSK 69

Query: 450 XXXXXXXXXXXXKHNVRDWLRVIASNKDRSIYELRYFNIAENEGEEED 307
                       KHNVRDWLRVIASNKDR++YELRYFNIAENEGEEED
Sbjct: 70  RYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAENEGEEED 117


Top