BLASTX nr result

ID: Glycyrrhiza24_contig00008392 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00008392
         (677 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001236251.1| uncharacterized protein LOC100305499 [Glycin...   166   4e-39
gb|AFK34710.1| unknown [Medicago truncatula]                          163   3e-38
ref|XP_003537717.1| PREDICTED: NADH dehydrogenase [ubiquinone] i...   163   3e-38
gb|AFK38177.1| unknown [Lotus japonicus]                              162   6e-38
ref|XP_002276949.1| PREDICTED: NADH dehydrogenase [ubiquinone] i...   162   6e-38

>ref|NP_001236251.1| uncharacterized protein LOC100305499 [Glycine max]
           gi|255625709|gb|ACU13199.1| unknown [Glycine max]
          Length = 103

 Score =  166 bits (420), Expect = 4e-39
 Identities = 80/106 (75%), Positives = 86/106 (81%)
 Frame = +2

Query: 95  MASSILRNLXXXXXXXXXXXXXXXXXCLVSPQISNHTAKWMQDTSKKSPMELINEVPPIK 274
           MASS+L++L                 CLV+ QISNHTAKWMQDTSKKSPMELINEVPPIK
Sbjct: 1   MASSVLKSLMRFSSSGNTTTRSF---CLVTSQISNHTAKWMQDTSKKSPMELINEVPPIK 57

Query: 275 VEGRIVACEGDTNIALGHPIEYICLDLPEPAICKYCGLRYVQDHHH 412
           VE RIVACEGDTN ALGHPIE+ICLDLPEPA+CKYCGLRYVQDHHH
Sbjct: 58  VESRIVACEGDTNSALGHPIEFICLDLPEPAVCKYCGLRYVQDHHH 103


>gb|AFK34710.1| unknown [Medicago truncatula]
          Length = 105

 Score =  163 bits (412), Expect = 3e-38
 Identities = 81/106 (76%), Positives = 85/106 (80%)
 Frame = +2

Query: 95  MASSILRNLXXXXXXXXXXXXXXXXXCLVSPQISNHTAKWMQDTSKKSPMELINEVPPIK 274
           MASSIL+NL                  LV+ QISNHTAKWMQDTSKKSPMELINEVPPIK
Sbjct: 1   MASSILKNLTRFSSSTATTNATRSFS-LVTSQISNHTAKWMQDTSKKSPMELINEVPPIK 59

Query: 275 VEGRIVACEGDTNIALGHPIEYICLDLPEPAICKYCGLRYVQDHHH 412
           VEGRIVACEGDT+ ALGHPIEYICLDL EPA+CKYCGLRYVQDHHH
Sbjct: 60  VEGRIVACEGDTDPALGHPIEYICLDLAEPAVCKYCGLRYVQDHHH 105


>ref|XP_003537717.1| PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 6,
           mitochondrial-like [Glycine max]
          Length = 105

 Score =  163 bits (412), Expect = 3e-38
 Identities = 79/106 (74%), Positives = 86/106 (81%)
 Frame = +2

Query: 95  MASSILRNLXXXXXXXXXXXXXXXXXCLVSPQISNHTAKWMQDTSKKSPMELINEVPPIK 274
           MASS+L++L                  LV+PQISNHTAKWMQDTSKKSPMELINEVPPIK
Sbjct: 1   MASSVLKSLLLRFSSSRNTTTTRSFS-LVTPQISNHTAKWMQDTSKKSPMELINEVPPIK 59

Query: 275 VEGRIVACEGDTNIALGHPIEYICLDLPEPAICKYCGLRYVQDHHH 412
           VE RIVACEGDT+ ALGHPIE+ICLDLPEPA+CKYCGLRYVQDHHH
Sbjct: 60  VESRIVACEGDTDPALGHPIEFICLDLPEPAVCKYCGLRYVQDHHH 105


>gb|AFK38177.1| unknown [Lotus japonicus]
          Length = 111

 Score =  162 bits (410), Expect = 6e-38
 Identities = 80/111 (72%), Positives = 84/111 (75%), Gaps = 5/111 (4%)
 Frame = +2

Query: 95  MASSILRNLXXXXXXXXXXXXXXXXXC-----LVSPQISNHTAKWMQDTSKKSPMELINE 259
           MASS+L+NL                       LV+PQI NHTAKWMQDTSKKSPMELINE
Sbjct: 1   MASSVLKNLIRFSLSSTTATATATATTTRNFSLVAPQIGNHTAKWMQDTSKKSPMELINE 60

Query: 260 VPPIKVEGRIVACEGDTNIALGHPIEYICLDLPEPAICKYCGLRYVQDHHH 412
           VPPIKVEGRIVACEGD N ALGHPIEYICLDL EPA+CKYCGLRYVQDHHH
Sbjct: 61  VPPIKVEGRIVACEGDNNPALGHPIEYICLDLAEPAVCKYCGLRYVQDHHH 111


>ref|XP_002276949.1| PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 6,
           mitochondrial [Vitis vinifera]
           gi|297737324|emb|CBI26525.3| unnamed protein product
           [Vitis vinifera]
          Length = 102

 Score =  162 bits (410), Expect = 6e-38
 Identities = 74/80 (92%), Positives = 76/80 (95%)
 Frame = +2

Query: 173 CLVSPQISNHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDTNIALGHPIEYICLD 352
           CLVS QISNHTAKWMQDTSKKSPMELINEVPPIKVE RIVACEGDTN ALGHPIE+ICLD
Sbjct: 23  CLVSGQISNHTAKWMQDTSKKSPMELINEVPPIKVEARIVACEGDTNPALGHPIEFICLD 82

Query: 353 LPEPAICKYCGLRYVQDHHH 412
           L EPA+CKYCGLRYVQDHHH
Sbjct: 83  LKEPAVCKYCGLRYVQDHHH 102


Top