BLASTX nr result

ID: Glycyrrhiza24_contig00008343 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00008343
         (1016 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK42652.1| unknown [Lotus japonicus]                              384   e-104
ref|XP_002520128.1| conserved hypothetical protein [Ricinus comm...   317   4e-84
ref|XP_002311601.1| predicted protein [Populus trichocarpa] gi|1...   317   4e-84
ref|NP_172893.1| ssDNA-binding transcriptional regulator [Arabid...   313   3e-83
gb|ADL36850.1| WHY domain class transcription factor [Malus x do...   313   4e-83

>gb|AFK42652.1| unknown [Lotus japonicus]
          Length = 261

 Score =  384 bits (986), Expect = e-104
 Identities = 190/219 (86%), Positives = 200/219 (91%), Gaps = 1/219 (0%)
 Frame = +3

Query: 87  IACRYSQDLFDHNKTTASTPNPSNPNA-SVGALPPRVYVGHSIYKGKSALTVTPRPPEFA 263
           I CR+S DLFD    ++STP P+NP A SVGALPPRVYVGHSIYKGK+ALTVTPRPPEFA
Sbjct: 44  IRCRHS-DLFDQKTFSSSTPQPANPAAVSVGALPPRVYVGHSIYKGKAALTVTPRPPEFA 102

Query: 264 PLDSGAFKISREGYVLLQFAPAIASRQYDWTRKQVFSLSVGEMGNLISLGARESCEFFHD 443
           PLDSGAFKISREGYVLLQFAPAIASRQYDW RKQVFSLSV EMG++ISLG RESCEFFHD
Sbjct: 103 PLDSGAFKISREGYVLLQFAPAIASRQYDWNRKQVFSLSVVEMGSVISLGTRESCEFFHD 162

Query: 444 PLKGKSDEGKVRKVLKLEPFPDGSGHFFNLGVQNKIVNIDESISIPVTKAEFAVLRSIFN 623
           PLKGKSDEGKVRKVLKLEP PDGSGHFFNL VQNKIVNIDE+I IPVTKAE AVL SIFN
Sbjct: 163 PLKGKSDEGKVRKVLKLEPLPDGSGHFFNLSVQNKIVNIDENIYIPVTKAELAVLSSIFN 222

Query: 624 FIMPYLLGWHTFANSINPEYSSVVNNASPRYGGDYEWNR 740
           FIMPY LGWHTFANS+NPEYSS VNNA+PRYGGDYEWNR
Sbjct: 223 FIMPYPLGWHTFANSVNPEYSSGVNNANPRYGGDYEWNR 261


>ref|XP_002520128.1| conserved hypothetical protein [Ricinus communis]
           gi|223540620|gb|EEF42183.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 271

 Score =  317 bits (811), Expect = 4e-84
 Identities = 154/222 (69%), Positives = 182/222 (81%), Gaps = 4/222 (1%)
 Frame = +3

Query: 87  IACRYSQDLFDHNKTTASTPNPSNPNASVG----ALPPRVYVGHSIYKGKSALTVTPRPP 254
           + CR S+  +D  +   +   PS+ ++S      A  PRVYVGHSIYKGK+ALTV PR P
Sbjct: 51  VKCRQSE-FYDQQQQKYNPSRPSSNDSSFASQSPAAVPRVYVGHSIYKGKAALTVEPRAP 109

Query: 255 EFAPLDSGAFKISREGYVLLQFAPAIASRQYDWTRKQVFSLSVGEMGNLISLGARESCEF 434
           EFA LDSGAFK++REG+VLLQFAPA   RQYDW+RKQVFSLSV E+G +ISLGAR+SCEF
Sbjct: 110 EFAALDSGAFKVAREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTEIGTIISLGARDSCEF 169

Query: 435 FHDPLKGKSDEGKVRKVLKLEPFPDGSGHFFNLGVQNKIVNIDESISIPVTKAEFAVLRS 614
           FHDP KGKSDEGK+RKVLK+EP PDGSGHFFNL VQNK +N+DESI IPVTKAEFAVL S
Sbjct: 170 FHDPNKGKSDEGKIRKVLKVEPLPDGSGHFFNLSVQNKPMNMDESIYIPVTKAEFAVLIS 229

Query: 615 IFNFIMPYLLGWHTFANSINPEYSSVVNNASPRYGGDYEWNR 740
            FN+I+PYLLGWHTFANSI P+ +  +NNA+PR+GGDYEW+R
Sbjct: 230 AFNYILPYLLGWHTFANSIKPDLNGHMNNANPRFGGDYEWSR 271


>ref|XP_002311601.1| predicted protein [Populus trichocarpa] gi|118485247|gb|ABK94483.1|
           unknown [Populus trichocarpa]
           gi|222851421|gb|EEE88968.1| predicted protein [Populus
           trichocarpa]
          Length = 265

 Score =  317 bits (811), Expect = 4e-84
 Identities = 152/223 (68%), Positives = 185/223 (82%), Gaps = 2/223 (0%)
 Frame = +3

Query: 78  TQPIACRYSQDLFDHNKTTASTPNPSNPNAS--VGALPPRVYVGHSIYKGKSALTVTPRP 251
           T  + C+Y    +D    T +T + S+P+++  VG  PP+V+VGHSIYKGK+ALTV PR 
Sbjct: 47  TLGVKCQY----YDQQHKTFTTSSRSSPSSAPPVGESPPKVFVGHSIYKGKAALTVEPRS 102

Query: 252 PEFAPLDSGAFKISREGYVLLQFAPAIASRQYDWTRKQVFSLSVGEMGNLISLGARESCE 431
           PEF+PLDSGA+K+ +EG+VLLQFAPA + RQYDWTRKQVFSLSV E+G+L+SL A+ SCE
Sbjct: 103 PEFSPLDSGAYKLVKEGFVLLQFAPAASVRQYDWTRKQVFSLSVTEIGHLVSLDAKGSCE 162

Query: 432 FFHDPLKGKSDEGKVRKVLKLEPFPDGSGHFFNLGVQNKIVNIDESISIPVTKAEFAVLR 611
           FFHDP KGKSDEGKVRK+LK+EP PDGSGHFFNL VQNK++NIDE+I IPVTKAE+ VL 
Sbjct: 163 FFHDPNKGKSDEGKVRKLLKVEPLPDGSGHFFNLSVQNKVLNIDENIYIPVTKAEYTVLT 222

Query: 612 SIFNFIMPYLLGWHTFANSINPEYSSVVNNASPRYGGDYEWNR 740
           S FN+I+PYLLGWH +ANSI P+ SS  NNASPRYGGDYEW+R
Sbjct: 223 SAFNYILPYLLGWHAYANSIKPDDSSRGNNASPRYGGDYEWSR 265


>ref|NP_172893.1| ssDNA-binding transcriptional regulator [Arabidopsis thaliana]
           gi|75191428|sp|Q9M9S3.1|WHY1_ARATH RecName:
           Full=Single-stranded DNA-binding protein WHY1,
           chloroplastic; AltName: Full=Protein PLASTID
           TRANSCRIPTIONALLY ACTIVE 1; AltName: Full=Protein WHIRLY
           1; Short=AtWHY1; Flags: Precursor
           gi|7262683|gb|AAF43941.1|AC012188_18 Contains similarity
           to a hypothetical protein from Arabidopsis thaliana
           gb|AC002521.2. EST gb|AI995686 comes from this gene
           [Arabidopsis thaliana]
           gi|12083312|gb|AAG48815.1|AF332452_1 putative
           DNA-binding protein p24 [Arabidopsis thaliana]
           gi|13877787|gb|AAK43971.1|AF370156_1 putative
           DNA-binding protein p24 [Arabidopsis thaliana]
           gi|16323418|gb|AAL15203.1| putative DNA-binding protein
           p24 [Arabidopsis thaliana] gi|332191039|gb|AEE29160.1|
           ssDNA-binding transcriptional regulator [Arabidopsis
           thaliana]
          Length = 263

 Score =  313 bits (803), Expect = 3e-83
 Identities = 147/203 (72%), Positives = 172/203 (84%)
 Frame = +3

Query: 132 TASTPNPSNPNASVGALPPRVYVGHSIYKGKSALTVTPRPPEFAPLDSGAFKISREGYVL 311
           ++S+P+P+        LP R YVGHSIYKGK+ALTV PR PEF  LDSGAFK+S++G++L
Sbjct: 67  SSSSPSPAE------GLPARFYVGHSIYKGKAALTVDPRAPEFVALDSGAFKLSKDGFLL 120

Query: 312 LQFAPAIASRQYDWTRKQVFSLSVGEMGNLISLGARESCEFFHDPLKGKSDEGKVRKVLK 491
           LQFAP+   RQYDW++KQVFSLSV E+G L+SLG RESCEFFHDP KGKSDEGKVRKVLK
Sbjct: 121 LQFAPSAGVRQYDWSKKQVFSLSVTEIGTLVSLGPRESCEFFHDPFKGKSDEGKVRKVLK 180

Query: 492 LEPFPDGSGHFFNLGVQNKIVNIDESISIPVTKAEFAVLRSIFNFIMPYLLGWHTFANSI 671
           +EP PDGSGHFFNL VQNK+VN+DESI IP+T+AEFAVL S FNF++PYL+GWH FANSI
Sbjct: 181 VEPLPDGSGHFFNLSVQNKLVNVDESIYIPITRAEFAVLISAFNFVLPYLIGWHAFANSI 240

Query: 672 NPEYSSVVNNASPRYGGDYEWNR 740
            PE +S VNNASP YGGDYEWNR
Sbjct: 241 KPEETSRVNNASPNYGGDYEWNR 263


>gb|ADL36850.1| WHY domain class transcription factor [Malus x domestica]
          Length = 276

 Score =  313 bits (802), Expect = 4e-83
 Identities = 148/222 (66%), Positives = 179/222 (80%), Gaps = 4/222 (1%)
 Frame = +3

Query: 87  IACRYSQDLFDHNKTTASTPNPSNPN----ASVGALPPRVYVGHSIYKGKSALTVTPRPP 254
           + CR S+       +TA++PN  +P     A    + PR YVGHSIYKGK+ALTV P+ P
Sbjct: 55  LKCRQSEYFDQQRTSTAASPNKPSPAPPTPAGATGMAPRFYVGHSIYKGKAALTVEPKAP 114

Query: 255 EFAPLDSGAFKISREGYVLLQFAPAIASRQYDWTRKQVFSLSVGEMGNLISLGARESCEF 434
           EF PLDSGAFK+SREG+VLLQFAPA   R YDW+RKQVFSLSV E+G+L+SLG++ES EF
Sbjct: 115 EFTPLDSGAFKLSREGFVLLQFAPAAGVRVYDWSRKQVFSLSVTEIGSLVSLGSKESLEF 174

Query: 435 FHDPLKGKSDEGKVRKVLKLEPFPDGSGHFFNLGVQNKIVNIDESISIPVTKAEFAVLRS 614
           FHDP KGKSDEGKVRKVLK+EP PDGSGHFFNL VQNK++N+DESI IP+T+AEFAVL+S
Sbjct: 175 FHDPFKGKSDEGKVRKVLKVEPLPDGSGHFFNLSVQNKLINLDESIYIPITRAEFAVLKS 234

Query: 615 IFNFIMPYLLGWHTFANSINPEYSSVVNNASPRYGGDYEWNR 740
            FNFI+PY+LGWH +ANSI PE SS  NN+  +YGGD+EW+R
Sbjct: 235 AFNFILPYILGWHAYANSIKPEDSSRANNSGLKYGGDFEWSR 276


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