BLASTX nr result

ID: Glycyrrhiza24_contig00008323 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00008323
         (1178 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003554917.1| PREDICTED: uncharacterized protein LOC100803...   245   1e-62
ref|XP_003552583.1| PREDICTED: transcription factor TCP13-like [...   199   9e-49
gb|ACJ85161.1| unknown [Medicago truncatula]                          190   5e-46
ref|XP_003530446.1| PREDICTED: transcription factor TCP13-like [...   185   2e-44
ref|XP_002305384.1| predicted protein [Populus trichocarpa] gi|2...   176   8e-42

>ref|XP_003554917.1| PREDICTED: uncharacterized protein LOC100803100 [Glycine max]
          Length = 374

 Score =  245 bits (626), Expect = 1e-62
 Identities = 175/363 (48%), Positives = 193/363 (53%), Gaps = 51/363 (14%)
 Frame = +2

Query: 44   QWLKLKQDPRIVRVSRAFGGKDRHSKVCTIRGLRDRRVRLSVPTATHLYDLQHRLGLNQP 223
            QWLKLK DPRIVRVSRAFGGKDRHSKVCTIRGLRDRRVRLSVPTA HLYDLQ RLGLNQP
Sbjct: 35   QWLKLK-DPRIVRVSRAFGGKDRHSKVCTIRGLRDRRVRLSVPTAIHLYDLQDRLGLNQP 93

Query: 224  SKVVDWLLNAAKHEIDEXXXXXXXXTNGSFHHHPYSLASSNDIVLSHN---------KEM 376
            SKVVDWLLNAAKHEIDE          G+F     SL S N++  S           K  
Sbjct: 94   SKVVDWLLNAAKHEIDELPPLPIPP--GNFTLGYPSLVSCNEVSTSREGSGQNTLLWKPK 151

Query: 377  VSTITTTTHEKENWMNNRSDAAEEEE-------DKQGSS--------------LPIRANN 493
               I  + H+K NWMN R    +++        DKQGS+              LP R N 
Sbjct: 152  PGEIMVSDHDKANWMNRREGDDDDDNNHNNSNGDKQGSNNNCHGGALVLPNNLLPTRPN- 210

Query: 494  NQLYHPSFLGLLNTMPSLGGSYQLEPSHHDV-VNAQLGNIGFVNQ-------IVPFXXXX 649
                HPSFLGL+NTMPSLG  YQ EP+     VN Q  N GF NQ       +VPF    
Sbjct: 211  ----HPSFLGLMNTMPSLG--YQWEPNSSAADVNVQWQNHGFFNQTDVHSIDVVPFPSTL 264

Query: 650  XXXXXXXXXXXXXXQILV-GATPTHYTHPYFPSSHXXXXXXXXXXXXXPRHVMMNNHYQM 826
                          QILV    P   T PYFPSSH               +    NHYQM
Sbjct: 265  ALSTGNSTSTTTTSQILVCPPPPGATTQPYFPSSH---------FATMEMNARQINHYQM 315

Query: 827  LMSTS------SSLNNPSQQHLMMRMSSSSSTP------NKLFHSPPNNSDQRHSHKDRD 970
            L S+S      +SLN+PS Q L   MS S   P       KLFHSP  NS + HS KD+D
Sbjct: 316  LSSSSHQNLLANSLNHPSSQQL---MSQSGKAPFSLRIRPKLFHSP--NSSESHSQKDQD 370

Query: 971  FLS 979
            F S
Sbjct: 371  FPS 373


>ref|XP_003552583.1| PREDICTED: transcription factor TCP13-like [Glycine max]
          Length = 384

 Score =  199 bits (507), Expect = 9e-49
 Identities = 154/356 (43%), Positives = 183/356 (51%), Gaps = 44/356 (12%)
 Frame = +2

Query: 44   QWLKLKQDPRIVRVSRAFGGKDRHSKVCTIRGLRDRRVRLSVPTATHLYDLQHRLGLNQP 223
            QW +LK DPRIVRVSRAFGGKDRHSKV TIRGLRDRRVRLSVPTA  LYDLQ RLGL+QP
Sbjct: 65   QWPRLK-DPRIVRVSRAFGGKDRHSKVFTIRGLRDRRVRLSVPTAIQLYDLQDRLGLSQP 123

Query: 224  SKVVDWLLNAAKHEIDEXXXXXXXXTNGSFHHHPYSLASSNDIVLSH------------- 364
            SKVVDWLL+AAKHEIDE        +  +F     S  +SN+   S+             
Sbjct: 124  SKVVDWLLDAAKHEIDELPPLPVVPSVNNFTLGHPSAVTSNEATTSNSQPNEQLLNINRS 183

Query: 365  -------------------NKEMVSTITTTTHEKENWMNNRSDAAEEEEDKQGSSLPIRA 487
                               ++EM+ST      +K NW+ +RS+  ++  + +G S  +  
Sbjct: 184  IQWEGSNQNSTWKLKPKEVSREMIST------DKPNWI-SRSEEDKQGSNNEGPSTRVIP 236

Query: 488  NNN-----QLYHPSFLGLLNTMPSLGGSYQLEPSHHDVVNAQLGNIGFVNQ-------IV 631
            N N      L HPSFLGLLNTMP     YQ EPS  D V+ QLGN GF NQ       +V
Sbjct: 237  NINLLPRANLNHPSFLGLLNTMPH---GYQWEPSAGD-VSHQLGNNGFANQTDMHSINVV 292

Query: 632  PFXXXXXXXXXXXXXXXXXXQILVGATPTHYTHPYFPSSHXXXXXXXXXXXXXPRHVMMN 811
            PF                  QIL+   P     PYFPS               PR +   
Sbjct: 293  PF------PTSTLSLSTGNSQILL--CPPGTAQPYFPS--------HVTMDMDPRQI--- 333

Query: 812  NHYQMLMSTSSSLNNPSQQHLMMRMSSSSSTPNKLFHSPPNNSDQRHSHKDRDFLS 979
            NHYQML   SS   NP   +L    S +  T +K  HSP  NS +  SHKD+DF S
Sbjct: 334  NHYQML---SSGSQNPLANYLNHSFSLAMMT-HKPLHSP--NSSKSPSHKDQDFPS 383


>gb|ACJ85161.1| unknown [Medicago truncatula]
          Length = 351

 Score =  190 bits (483), Expect = 5e-46
 Identities = 135/340 (39%), Positives = 179/340 (52%), Gaps = 30/340 (8%)
 Frame = +2

Query: 44  QWLKLKQDPRIVRVSRAFGGKDRHSKVCTIRGLRDRRVRLSVPTATHLYDLQHRLGLNQP 223
           QW +LK DPRIVRVSRAFGGKDRHSKVCTIRGLRDRRVRLSVPTA  LYDLQ RLGLNQP
Sbjct: 39  QWPRLK-DPRIVRVSRAFGGKDRHSKVCTIRGLRDRRVRLSVPTAIQLYDLQDRLGLNQP 97

Query: 224 SKVVDWLLNAAKHEIDE---XXXXXXXXTNGSFHHHPYSLASSNDIVLSHNKEMVSTITT 394
           SKVVDWLLNAAK +ID+           TN +F   P S   +N  + + N+  +    +
Sbjct: 98  SKVVDWLLNAAKQDIDQLPPLPNFSPVGTNFNF-GFPSSNELNNQQLFNFNRNNIHWEGS 156

Query: 395 TTHEKENWMNN-----------------RSDAAEEEEDKQGSSLPIRA------NNNQLY 505
           T+ +   W +N                  S   EE  +KQGS++ +        NNN L 
Sbjct: 157 TSSQNSTWKSNPKEVSRELVNDKPNYLMNSTQEEENINKQGSNIEVPTATVFPNNNNMLQ 216

Query: 506 ---HPSFLGLLNTMPSLGGSYQLEPSHHDVVN-AQLGNIGFVNQIVPFXXXXXXXXXXXX 673
              HPSFLGLLN MP LG +YQ   + +D  N +QLGN GF+  + P             
Sbjct: 217 RPNHPSFLGLLNNMP-LGTNYQWGGTSNDAENSSQLGNNGFITSLPPM---------LSL 266

Query: 674 XXXXXXQILVGATPTHYTHPYFPSSHXXXXXXXXXXXXXPRHVMMNNHYQMLMSTSSSLN 853
                 Q+++G T +     YF S+               +  + N+HY  ++S+S+S  
Sbjct: 267 STGNSSQMMLGTTQS-----YFSSN-----VNAMEMDHHHQREIHNHHYHQMLSSSNSFQ 316

Query: 854 NPSQQHLMMRMSSSSSTPNKLFHSPPNNSDQRHSHKDRDF 973
           NP        M++S + P+        NS +  S+K+++F
Sbjct: 317 NP--------MTNSLNNPSFSLAKFLQNSRENSSNKEQEF 348


>ref|XP_003530446.1| PREDICTED: transcription factor TCP13-like [Glycine max]
          Length = 355

 Score =  185 bits (470), Expect = 2e-44
 Identities = 147/354 (41%), Positives = 176/354 (49%), Gaps = 44/354 (12%)
 Frame = +2

Query: 44  QWLKLKQDPRIVRVSRAFGGKDRHSKVCTIRGLRDRRVRLSVPTATHLYDLQHRLGLNQP 223
           QW +LK DPRIVRVSRAFGGKDRHSKVCTIRGLRDRRVRLSVPTA  LYDLQ RLGL+QP
Sbjct: 36  QWPRLK-DPRIVRVSRAFGGKDRHSKVCTIRGLRDRRVRLSVPTAIQLYDLQDRLGLSQP 94

Query: 224 SKVVDWLLNAAKHEIDEXXXXXXXXTNGSFHHHPYSLASSNDIVLSHNK----------- 370
           SKVVDWLLNAAKHEIDE        +  +F     S  +SN+   S+++           
Sbjct: 95  SKVVDWLLNAAKHEIDELPPLPIIPSVNNFTLGYPSAVTSNEATTSNSQPNEQLLNINRS 154

Query: 371 ---------------------EMVSTITTTTHEKENWMNNRSDAAEEEEDKQGSSLPIRA 487
                                EMVST      +K NW+ +RS   ++  + QG S  +  
Sbjct: 155 IQWEDSNHNSTWKLKAKEVSGEMVST------DKPNWI-SRSQEDKQGSNNQGPSTHVIP 207

Query: 488 NNN-----QLYHPSFLGLLNTMPSLGGSYQLEPS----HHDVVNAQLGNIGFVN---QIV 631
           N N      L HPSFLGLLNTMP     Y+ E S     H + N +L N+  ++    +V
Sbjct: 208 NINLLPRANLNHPSFLGLLNTMPH---GYRWEHSAGDVSHPLGNNELSNLTDIHNNINVV 264

Query: 632 PFXXXXXXXXXXXXXXXXXXQILVGATPTHYTHPYFPSSHXXXXXXXXXXXXXPRHVMMN 811
           PF                  QI++   P   T PYFPS               PR +   
Sbjct: 265 PF------PTSSLSLSTGNSQIML--CPPGATQPYFPS-------HVTAMDMDPRQI--- 306

Query: 812 NHYQMLMSTSSSLNNPSQQHLMMRMSSSSSTPNKLFHSPPNNSDQRHSHKDRDF 973
           NHYQML   SS   NP    L    S +      L  SP  NS +  SHKD+DF
Sbjct: 307 NHYQML---SSGSENPLANSLNHSFSLAMMAHKPLL-SP--NSSKSPSHKDQDF 354


>ref|XP_002305384.1| predicted protein [Populus trichocarpa] gi|222848348|gb|EEE85895.1|
            predicted protein [Populus trichocarpa]
          Length = 365

 Score =  176 bits (447), Expect = 8e-42
 Identities = 142/352 (40%), Positives = 162/352 (46%), Gaps = 52/352 (14%)
 Frame = +2

Query: 47   WLKLKQDPRIVRVSRAFGGKDRHSKVCTIRGLRDRRVRLSVPTATHLYDLQHRLGLNQPS 226
            WL+LK DPRIVRVSRAFGGKDRHSKVCTIRGLRDRRVRLSVPTA  LYDLQ RLGLNQPS
Sbjct: 33   WLRLK-DPRIVRVSRAFGGKDRHSKVCTIRGLRDRRVRLSVPTAIQLYDLQDRLGLNQPS 91

Query: 227  KVVDWLLNAAKHEIDEXXXXXXXXTNGSFHHHPYSLASSNDIVLSHNKEMV--------- 379
            KVVDWLLNAAKHEIDE         N S +H    L SSN++  S + + V         
Sbjct: 92   KVVDWLLNAAKHEIDELPPLPMPPGNFSLNHQA-MLGSSNEVGASRSSKEVFKMNNGVDW 150

Query: 380  -----------------------STITTTTHEKENWMNNRSDAAEEEEDKQGSSLPIRAN 490
                                     +T   +EKENW      A  +EEDK+  S  I  N
Sbjct: 151  EDTSGFTRPSFWNADAILRAKSKEVMTDPVNEKENW------AKRDEEDKEDGS--IEGN 202

Query: 491  NNQLYHPSFL---------GLLNTMPSLGGSYQLEPSHHDVVNAQLGNIGFVNQIVPFXX 643
              Q    SFL         GL+N     G  + LEP    +  + +GN GF  Q      
Sbjct: 203  TAQALSSSFLQRASHSSLPGLINNAMPYGSFFHLEPQSFPL--SHMGNHGFATQTGDIHN 260

Query: 644  XXXXXXXXXXXXXXXXQILVGATPTHYTHPYFPSSHXXXXXXXXXXXXXPRHVMMNNHYQ 823
                            QILV   P   T  YFPS               PR +   NH+Q
Sbjct: 261  LNVVPLSSALSLSSGSQILV--CPPGTTQSYFPS------HATASMEIDPRQI---NHFQ 309

Query: 824  MLM-STSSSLNN---PSQQHLMMRMSSS---SSTPNKLF----HSPPNNSDQ 946
             L  ST + L N   PS   +   M  S   S TP  L      SPP+   Q
Sbjct: 310  WLTPSTQNLLPNSLTPSPYPISQSMRPSQYFSVTPRVLHSQNSESPPDKDPQ 361


Top