BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00008291
         (347 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003535694.1| PREDICTED: pentatricopeptide repeat-containi...   174   7e-42
ref|XP_003607763.1| Pentatricopeptide repeat-containing protein ...    97   1e-18
ref|XP_004144815.1| PREDICTED: pentatricopeptide repeat-containi...    73   3e-11
ref|XP_002512497.1| pentatricopeptide repeat-containing protein,...    66   3e-09
ref|XP_003550993.1| PREDICTED: pentatricopeptide repeat-containi...    64   1e-08

>ref|XP_003535694.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like [Glycine max]
          Length = 634

 Score =  174 bits (441), Expect = 7e-42
 Identities = 83/110 (75%), Positives = 93/110 (84%)
 Frame = -2

Query: 334 NPQNLATLLQGHLPRSHLLQSHARVFQVGAHQDNLIATRLIGQYPSRVALRVFHQLQNPN 155
           +P NLATLLQG++PRSHLLQ HAR+F +GAHQDNLIATRLIG YPSR ALRVFH LQNPN
Sbjct: 35  DPTNLATLLQGNIPRSHLLQIHARIFYLGAHQDNLIATRLIGHYPSRAALRVFHHLQNPN 94

Query: 154 IFPFNAIIRVLAHEGHFFQVFSLFHCLKQRPLIPNDLTFSFLLKACLKCK 5
           IFPFNAIIRVLA +GHFF   S+F+ LK+R L PNDLTFSFL K C + K
Sbjct: 95  IFPFNAIIRVLAQDGHFFHALSVFNYLKRRSLSPNDLTFSFLFKPCFRTK 144


>ref|XP_003607763.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355508818|gb|AES89960.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 871

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 49/74 (66%), Positives = 54/74 (72%)
 Frame = -2

Query: 316 TLLQGHLPRSHLLQSHARVFQVGAHQDNLIATRLIGQYPSRVALRVFHQLQNPNIFPFNA 137
           T LQGHL   HLLQ HA +FQ GAHQ NLIATRLIG Y S++ L VFHQL NPN FPFN 
Sbjct: 728 TSLQGHLSLPHLLQIHAHIFQFGAHQHNLIATRLIGHYISQIDLCVFHQLHNPNNFPFND 787

Query: 136 IIRVLAHEGHFFQV 95
           IIR LA + +F  V
Sbjct: 788 IIRFLAQKAYFLFV 801


>ref|XP_004144815.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09190-like [Cucumis sativus]
           gi|449490933|ref|XP_004158752.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g09190-like [Cucumis sativus]
          Length = 484

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 43/108 (39%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
 Frame = -2

Query: 328 QNLATLLQGHLPRSHLLQSHARVFQVGAHQDNLIATRLIGQYPS--RVAL--RVFHQLQN 161
           + +  LL GH  R+HL Q HA   + G HQ N I    I    S  R+A   R+F Q  N
Sbjct: 10  RRILRLLHGHKSRTHLTQIHAHFLRHGLHQSNQILAHFISVCASFNRIAYADRLFSQSHN 69

Query: 160 PNIFPFNAIIRVLAHEGHFFQVFSLFHCLKQRPLIPNDLTFSFLLKAC 17
           PNIF FN+II+  +    F Q   LF  +K   ++P+  TF+ LLK+C
Sbjct: 70  PNIFLFNSIIKAHSLSVPFHQSLLLFSSMKNHRIVPDQYTFAPLLKSC 117


>ref|XP_002512497.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223548458|gb|EEF49949.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 459

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 42/108 (38%), Positives = 57/108 (52%), Gaps = 4/108 (3%)
 Frame = -2

Query: 328 QNLATLLQGHLPRSHLLQSHARVFQVGAHQDNLIATRLIGQYPSR----VALRVFHQLQN 161
           + +  LL GH  R+ L Q HA   + G  Q N I    I    S      A RVF Q  N
Sbjct: 168 RKILKLLHGHNTRTQLRQIHAHFLRHGLDQLNHILAHFISVCGSENKMPYANRVFLQSVN 227

Query: 160 PNIFPFNAIIRVLAHEGHFFQVFSLFHCLKQRPLIPNDLTFSFLLKAC 17
           PNI PFNA+++  +  G F +  S F  +K+R + P++ TF+ LLKAC
Sbjct: 228 PNILPFNAMVKGYSLCGPFEESLSFFSSMKRRGIWPDEYTFAPLLKAC 275


>ref|XP_003550993.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
           chloroplastic-like [Glycine max]
          Length = 628

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 38/112 (33%), Positives = 54/112 (48%), Gaps = 4/112 (3%)
 Frame = -2

Query: 340 PNNPQNLATLLQGHLPRSHLLQSHARVFQVGAHQDNLIATRLIGQYPS----RVALRVFH 173
           P +  NLA L+       HLLQ HA + + G H   ++  +L   Y S      ++ +FH
Sbjct: 20  PVDKDNLALLIDNSKSTHHLLQIHAALLRRGLHHHPILNFKLQRSYASLGHLHHSVTLFH 79

Query: 172 QLQNPNIFPFNAIIRVLAHEGHFFQVFSLFHCLKQRPLIPNDLTFSFLLKAC 17
           +  NPN+F +  II   AH   F    S +  +   P+ PN  T S LLKAC
Sbjct: 80  RTPNPNVFLWTHIINAHAHFDLFHHALSYYSQMLTHPIQPNAFTLSSLLKAC 131