BLASTX nr result

ID: Glycyrrhiza24_contig00008272 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00008272
         (273 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003525559.1| PREDICTED: nudix hydrolase 14, chloroplastic...   130   1e-28
gb|ACU19805.1| unknown [Glycine max]                                  130   1e-28
ref|XP_003608777.1| Nudix hydrolase [Medicago truncatula] gi|355...   127   1e-27
ref|XP_003525788.1| PREDICTED: nudix hydrolase 14, chloroplastic...    92   4e-17
ref|XP_002281806.1| PREDICTED: nudix hydrolase 14, chloroplastic...    75   4e-12

>ref|XP_003525559.1| PREDICTED: nudix hydrolase 14, chloroplastic-like [Glycine max]
          Length = 304

 Score =  130 bits (327), Expect = 1e-28
 Identities = 62/86 (72%), Positives = 72/86 (83%), Gaps = 1/86 (1%)
 Frame = -2

Query: 257 MAVAVRTVSAALKRFTPFIAPNWTSKK-KGFCCKMSTESSPLTHCITLPSKQSEPVHIVA 81
           MA+ +R+V  ALKRFTP  + NW SKK KGF CKMSTES+ LTH ITLP+K +EPVH+VA
Sbjct: 1   MAMNIRSVCGALKRFTPLHSSNWVSKKNKGFSCKMSTESTSLTHTITLPNKHNEPVHVVA 60

Query: 80  APGVSHSDFWSAIDSSLFKQWLHNLQ 3
           APGVS SDFWSA++ SLFKQWLHNLQ
Sbjct: 61  APGVSPSDFWSAVECSLFKQWLHNLQ 86


>gb|ACU19805.1| unknown [Glycine max]
          Length = 223

 Score =  130 bits (327), Expect = 1e-28
 Identities = 62/86 (72%), Positives = 72/86 (83%), Gaps = 1/86 (1%)
 Frame = -2

Query: 257 MAVAVRTVSAALKRFTPFIAPNWTSKK-KGFCCKMSTESSPLTHCITLPSKQSEPVHIVA 81
           MA+ +R+V  ALKRFTP  + NW SKK KGF CKMSTES+ LTH ITLP+K +EPVH+VA
Sbjct: 1   MAMNIRSVCGALKRFTPLHSSNWVSKKNKGFSCKMSTESTSLTHTITLPNKHNEPVHVVA 60

Query: 80  APGVSHSDFWSAIDSSLFKQWLHNLQ 3
           APGVS SDFWSA++ SLFKQWLHNLQ
Sbjct: 61  APGVSPSDFWSAVECSLFKQWLHNLQ 86


>ref|XP_003608777.1| Nudix hydrolase [Medicago truncatula] gi|355509832|gb|AES90974.1|
           Nudix hydrolase [Medicago truncatula]
          Length = 148

 Score =  127 bits (318), Expect = 1e-27
 Identities = 69/89 (77%), Positives = 71/89 (79%), Gaps = 4/89 (4%)
 Frame = -2

Query: 257 MAVAVRTVSAALKRFTPFIAPNWTSKKK--GFCCKMS--TESSPLTHCITLPSKQSEPVH 90
           MAV VRT+SAALK   PF APN   KKK  GF  KMS  TES  LTH ITLPSKQSEPVH
Sbjct: 1   MAVTVRTISAALKNLKPFHAPNLIPKKKKNGFFYKMSSSTESPSLTHSITLPSKQSEPVH 60

Query: 89  IVAAPGVSHSDFWSAIDSSLFKQWLHNLQ 3
           I+AAPGVS SDFWSAIDSSLFKQWLHNLQ
Sbjct: 61  ILAAPGVSSSDFWSAIDSSLFKQWLHNLQ 89


>ref|XP_003525788.1| PREDICTED: nudix hydrolase 14, chloroplastic-like [Glycine max]
          Length = 270

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 42/52 (80%), Positives = 47/52 (90%)
 Frame = -2

Query: 158 MSTESSPLTHCITLPSKQSEPVHIVAAPGVSHSDFWSAIDSSLFKQWLHNLQ 3
           MSTES  LTH ITLP+K +EPVHIVAAPGVS+SDFW A++SSLFKQWLHNLQ
Sbjct: 1   MSTESPSLTHTITLPNKHNEPVHIVAAPGVSNSDFWCAVESSLFKQWLHNLQ 52


>ref|XP_002281806.1| PREDICTED: nudix hydrolase 14, chloroplastic [Vitis vinifera]
           gi|147766435|emb|CAN76052.1| hypothetical protein
           VITISV_016365 [Vitis vinifera]
          Length = 306

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 35/59 (59%), Positives = 48/59 (81%)
 Frame = -2

Query: 179 KKGFCCKMSTESSPLTHCITLPSKQSEPVHIVAAPGVSHSDFWSAIDSSLFKQWLHNLQ 3
           ++ FC KMS++SS LT+ ITLP++ ++PV + AAPG+S S+F  AIDSSLFKQWL N+Q
Sbjct: 31  RRTFCPKMSSDSSSLTYSITLPNQLADPVTVDAAPGISASEFRKAIDSSLFKQWLKNMQ 89


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