BLASTX nr result

ID: Glycyrrhiza24_contig00008224 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00008224
         (536 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001241910.1| uncharacterized protein LOC100804102 [Glycin...   139   3e-31
ref|XP_003603092.1| Cyclin D3-1 [Medicago truncatula] gi|3554921...   133   1e-29
ref|XP_003603091.1| Cyclin D3-1 [Medicago truncatula] gi|3554921...   133   1e-29
ref|XP_003544475.1| PREDICTED: LOW QUALITY PROTEIN: cyclin-D3-1-...   130   9e-29
gb|ACU23762.1| unknown [Glycine max]                                  129   3e-28

>ref|NP_001241910.1| uncharacterized protein LOC100804102 [Glycine max]
           gi|255639037|gb|ACU19819.1| unknown [Glycine max]
          Length = 383

 Score =  139 bits (350), Expect = 3e-31
 Identities = 85/129 (65%), Positives = 99/129 (76%), Gaps = 8/129 (6%)
 Frame = -2

Query: 535 LATATMMHVVTNVEHSLAVEYQNQLLAILGFNKDKVEECYKLMLEVVSGYN----KSKFN 368
           LATAT+M VV  VE  L VEYQ+QLL ILG +K+KVEECY LM+EVVSGY+    ++K  
Sbjct: 258 LATATVMRVVNTVEPRLGVEYQDQLLGILGIDKEKVEECYNLMMEVVSGYDEEGKRTKLK 317

Query: 367 KRKFGSI--PSSPNGIMEGSFSSD-SSNEYWEVDHASVSSSPLSKKTRTQDDQLLLNHSN 197
           KRK  SI   SS NG+MEGSFS D SSNE WE+  +SVSSS  SKKTRTQ DQLLLNHSN
Sbjct: 318 KRKLESIIPCSSQNGVMEGSFSCDSSSNESWELGASSVSSS--SKKTRTQ-DQLLLNHSN 374

Query: 196 -TEFLSIPR 173
            ++F+SIPR
Sbjct: 375 SSDFISIPR 383


>ref|XP_003603092.1| Cyclin D3-1 [Medicago truncatula] gi|355492140|gb|AES73343.1|
           Cyclin D3-1 [Medicago truncatula]
          Length = 177

 Score =  133 bits (335), Expect = 1e-29
 Identities = 75/113 (66%), Positives = 88/113 (77%), Gaps = 3/113 (2%)
 Frame = -2

Query: 535 LATATMMHVVTNVEHSLAVEYQNQLLAILGFNKDKVEECYKLMLEVVSGYNK-SKFNKRK 359
           LATATM+HV  +VE SL  EYQ QLL ILG NKDKV+EC KL+L++ SGY + ++ NKRK
Sbjct: 66  LATATMVHVFNSVEPSLGDEYQTQLLGILGINKDKVDECGKLLLKLWSGYEEGNECNKRK 125

Query: 358 FGSIPSSPNGIMEGSFSSDSSNEYWEVDHASVSSS--PLSKKTRTQDDQLLLN 206
           FGSIPSSP G+ME SFS D+SN+ W +  ASVSSS  PLSKK RTQ DQ LLN
Sbjct: 126 FGSIPSSPKGVMEMSFSCDNSNDSWAIIAASVSSSPEPLSKKIRTQ-DQFLLN 177


>ref|XP_003603091.1| Cyclin D3-1 [Medicago truncatula] gi|355492139|gb|AES73342.1|
           Cyclin D3-1 [Medicago truncatula]
           gi|388511523|gb|AFK43823.1| unknown [Medicago
           truncatula]
          Length = 348

 Score =  133 bits (335), Expect = 1e-29
 Identities = 75/113 (66%), Positives = 88/113 (77%), Gaps = 3/113 (2%)
 Frame = -2

Query: 535 LATATMMHVVTNVEHSLAVEYQNQLLAILGFNKDKVEECYKLMLEVVSGYNK-SKFNKRK 359
           LATATM+HV  +VE SL  EYQ QLL ILG NKDKV+EC KL+L++ SGY + ++ NKRK
Sbjct: 237 LATATMVHVFNSVEPSLGDEYQTQLLGILGINKDKVDECGKLLLKLWSGYEEGNECNKRK 296

Query: 358 FGSIPSSPNGIMEGSFSSDSSNEYWEVDHASVSSS--PLSKKTRTQDDQLLLN 206
           FGSIPSSP G+ME SFS D+SN+ W +  ASVSSS  PLSKK RTQ DQ LLN
Sbjct: 297 FGSIPSSPKGVMEMSFSCDNSNDSWAIIAASVSSSPEPLSKKIRTQ-DQFLLN 348


>ref|XP_003544475.1| PREDICTED: LOW QUALITY PROTEIN: cyclin-D3-1-like [Glycine max]
          Length = 378

 Score =  130 bits (328), Expect = 9e-29
 Identities = 83/129 (64%), Positives = 97/129 (75%), Gaps = 8/129 (6%)
 Frame = -2

Query: 535 LATATMMHVVTNVEHSLAVEYQNQLLAILGFNKDKVEECYKLMLEVVSGYN----KSKFN 368
           +ATAT+M VV  V   L VEYQ+QLL ILG +K+KVEECYKLM+EVVSGY+    +SK  
Sbjct: 253 VATATVMRVVNIVASRLGVEYQDQLLGILGIDKEKVEECYKLMMEVVSGYDEEGKRSKLK 312

Query: 367 KRKFGSI--PSSPNGIMEGSFSSD-SSNEYWEVDHASVSSSPLSKKTRTQDDQLLLNHSN 197
           KRKF SI   SS N + E SFS D SSNE WE+  +SVSSS  SKKTR+Q DQLLLNHSN
Sbjct: 313 KRKFESIIPCSSQNCVKEESFSCDSSSNESWELGASSVSSS--SKKTRSQ-DQLLLNHSN 369

Query: 196 -TEFLSIPR 173
            ++FLSIPR
Sbjct: 370 SSDFLSIPR 378


>gb|ACU23762.1| unknown [Glycine max]
          Length = 381

 Score =  129 bits (324), Expect = 3e-28
 Identities = 83/129 (64%), Positives = 96/129 (74%), Gaps = 8/129 (6%)
 Frame = -2

Query: 535 LATATMMHVVTNVEHSLAVEYQNQLLAILGFNKDKVEECYKLMLEVVSGYN----KSKFN 368
           +ATAT+M VV  V   L VEYQ+QLL ILG +K+KVEECYKLM+EVVSGY+    +SK  
Sbjct: 256 VATATVMRVVNIVASRLGVEYQDQLLGILGIDKEKVEECYKLMMEVVSGYDEEGKRSKLK 315

Query: 367 KRKFGSI--PSSPNGIMEGSFSSD-SSNEYWEVDHASVSSSPLSKKTRTQDDQLLLNHSN 197
           KRKF SI   SS N + E SFS D SSNE WE+   SVSSS  SKKTR+Q DQLLLNHSN
Sbjct: 316 KRKFESIIPCSSQNCVKEESFSCDSSSNESWELGVFSVSSS--SKKTRSQ-DQLLLNHSN 372

Query: 196 -TEFLSIPR 173
            ++FLSIPR
Sbjct: 373 SSDFLSIPR 381


Top