BLASTX nr result

ID: Glycyrrhiza24_contig00008206 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00008206
         (896 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003610553.1| hypothetical protein MTR_4g133490 [Medicago ...   152   8e-35
ref|XP_003598085.1| Paired amphipathic helix protein Sin3a [Medi...   149   1e-33
ref|XP_003623372.1| hypothetical protein MTR_7g070100 [Medicago ...   146   6e-33
ref|XP_003598084.1| Paired amphipathic helix protein Sin3 [Medic...   144   3e-32
ref|XP_003598081.1| Paired amphipathic helix protein Sin3 [Medic...   143   6e-32

>ref|XP_003610553.1| hypothetical protein MTR_4g133490 [Medicago truncatula]
           gi|355511608|gb|AES92750.1| hypothetical protein
           MTR_4g133490 [Medicago truncatula]
          Length = 348

 Score =  152 bits (385), Expect = 8e-35
 Identities = 83/138 (60%), Positives = 97/138 (70%), Gaps = 2/138 (1%)
 Frame = -2

Query: 409 LPWDLLDIISKQLDFDDLFQFAGVCKIWREFHKIYWKTFTASKSPLLVQTSSWAKKAYVF 230
           L WD+LDIISK LDFDDLFQFA VCK WR FHK+YW+ F A + PLLVQ SS+ KK++ F
Sbjct: 8   LSWDVLDIISKSLDFDDLFQFACVCKNWRAFHKMYWRNFLALQEPLLVQKSSFFKKSFSF 67

Query: 229 FSIPDRKVYSSKM-DYFWXXXXXXXXXXXLIMAGAGN-LLLMNPFTRRKKEINTTSLHLQ 56
            SIP++KVY SKM +YFW           LIM G  N  LLMNPFTRRKK INT++  + 
Sbjct: 68  ISIPNQKVYRSKMINYFWHFAYSGSSSGYLIMTGNNNSFLLMNPFTRRKKVINTSTFKV- 126

Query: 55  GNFEYRACQPLLAFAKGS 2
            NF Y A + LLAF KGS
Sbjct: 127 -NFSYFAYRVLLAFDKGS 143


>ref|XP_003598085.1| Paired amphipathic helix protein Sin3a [Medicago truncatula]
           gi|355487133|gb|AES68336.1| Paired amphipathic helix
           protein Sin3a [Medicago truncatula]
          Length = 699

 Score =  149 bits (375), Expect = 1e-33
 Identities = 80/138 (57%), Positives = 94/138 (68%), Gaps = 2/138 (1%)
 Frame = -2

Query: 409 LPWDLLDIISKQLDFDDLFQFAGVCKIWREFHKIYWKTFTASKSPLLVQTSSWAKKAYVF 230
           + WD+LD+IS+ LDFDDLFQFAGVCK WREFHKIYWK F A + PLL+Q SS  KK++ F
Sbjct: 269 ISWDMLDVISRDLDFDDLFQFAGVCKNWREFHKIYWKKFLALQEPLLIQKSSHDKKSFSF 328

Query: 229 FSIPDRKVYSSK-MDYFWXXXXXXXXXXXLIMAGAGN-LLLMNPFTRRKKEINTTSLHLQ 56
            SI DRKVY SK ++ FW           LIM G  N  LL+NPFTRRKK INT++  + 
Sbjct: 329 ISIADRKVYHSKTINQFWHVAYSGCSSGYLIMTGDNNSFLLLNPFTRRKKVINTSTFKV- 387

Query: 55  GNFEYRACQPLLAFAKGS 2
            N  Y A   LLAF KGS
Sbjct: 388 -NSSYFAYHVLLAFGKGS 404


>ref|XP_003623372.1| hypothetical protein MTR_7g070100 [Medicago truncatula]
           gi|355498387|gb|AES79590.1| hypothetical protein
           MTR_7g070100 [Medicago truncatula]
          Length = 350

 Score =  146 bits (369), Expect = 6e-33
 Identities = 79/137 (57%), Positives = 96/137 (70%), Gaps = 1/137 (0%)
 Frame = -2

Query: 409 LPWDLLDIISKQLDFDDLFQFAGVCKIWREFHKIYWKTFTASKSPLLVQTSSWAKKAYVF 230
           LP ++LDIISK LDFDDLFQFAGVCK WREFHKIY   F AS++PL+ QTSS++K  Y F
Sbjct: 10  LPPEMLDIISKNLDFDDLFQFAGVCKSWREFHKIYCINFLASQAPLIFQTSSYSKDDYSF 69

Query: 229 FSIPDRKVYSSKMDYFWXXXXXXXXXXXLIMAGAGN-LLLMNPFTRRKKEINTTSLHLQG 53
           +SIP+++ Y  KM   W           LIMAG  + LLL+NPF RRKK INT+   L+G
Sbjct: 70  YSIPNQRAYRLKMGSLWGYSYSGSSSGYLIMAGDNDTLLLINPFRRRKKVINTSV--LRG 127

Query: 52  NFEYRACQPLLAFAKGS 2
            F   +C+ LLAFAKGS
Sbjct: 128 KFSSSSCRALLAFAKGS 144


>ref|XP_003598084.1| Paired amphipathic helix protein Sin3 [Medicago truncatula]
           gi|355487132|gb|AES68335.1| Paired amphipathic helix
           protein Sin3 [Medicago truncatula]
          Length = 546

 Score =  144 bits (363), Expect = 3e-32
 Identities = 78/137 (56%), Positives = 91/137 (66%), Gaps = 2/137 (1%)
 Frame = -2

Query: 409 LPWDLLDIISKQLDFDDLFQFAGVCKIWREFHKIYWKTFTASKSPLLVQTSSWAKKAYVF 230
           + WD+LD+IS+ LDFDDLFQFAGVCK WREF K YWK F AS  PLL+Q SS  KK++ F
Sbjct: 204 ISWDILDVISRDLDFDDLFQFAGVCKNWREFQKTYWKKFLASPEPLLIQKSSHDKKSFSF 263

Query: 229 FSIPDRKVYSSK-MDYFWXXXXXXXXXXXLIMAGAGN-LLLMNPFTRRKKEINTTSLHLQ 56
            SI DRKVY SK ++ FW           LIM G  N  LL+NPFTRRKK INT++  + 
Sbjct: 264 ISIADRKVYHSKTINQFWQVAYSGCSSGYLIMTGDNNSFLLLNPFTRRKKVINTSTFKV- 322

Query: 55  GNFEYRACQPLLAFAKG 5
            N  Y A   LLAF KG
Sbjct: 323 -NSSYLAYHVLLAFGKG 338


>ref|XP_003598081.1| Paired amphipathic helix protein Sin3 [Medicago truncatula]
           gi|355487129|gb|AES68332.1| Paired amphipathic helix
           protein Sin3 [Medicago truncatula]
          Length = 520

 Score =  143 bits (360), Expect = 6e-32
 Identities = 77/137 (56%), Positives = 94/137 (68%), Gaps = 2/137 (1%)
 Frame = -2

Query: 409 LPWDLLDIISKQLDFDDLFQFAGVCKIWREFHKIYWKTFTASKSPLLVQTSSWAKKAYVF 230
           +PWDLLD+IS++LDFDDLF+FAGVCK WREFHK YW+ F AS+ PLLVQ SS  +K + F
Sbjct: 179 VPWDLLDMISRKLDFDDLFEFAGVCKNWREFHKFYWRNFLASEEPLLVQKSSHYEKYFSF 238

Query: 229 FSIPDRKVYSSK-MDYFWXXXXXXXXXXXLIMAGAGN-LLLMNPFTRRKKEINTTSLHLQ 56
            S+PDRKVY SK +++FW           LIM    N  +LMN FTRRK EINT+S  ++
Sbjct: 239 ISLPDRKVYHSKVINHFWRLAYCGSSSGYLIMTTHNNSFMLMNLFTRRKMEINTSSFKVK 298

Query: 55  GNFEYRACQPLLAFAKG 5
             F   A   LLAF KG
Sbjct: 299 --FSTFAYHVLLAFGKG 313


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