BLASTX nr result

ID: Glycyrrhiza24_contig00008197 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00008197
         (700 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003608886.1| hypothetical protein MTR_4g104040 [Medicago ...   101   1e-19
gb|AFK46633.1| unknown [Lotus japonicus]                              100   3e-19
ref|XP_003549838.1| PREDICTED: uncharacterized protein LOC100811...    92   8e-17
ref|XP_003525654.1| PREDICTED: uncharacterized protein LOC100807...    91   2e-16
ref|XP_002321678.1| predicted protein [Populus trichocarpa] gi|1...    66   8e-09

>ref|XP_003608886.1| hypothetical protein MTR_4g104040 [Medicago truncatula]
           gi|355509941|gb|AES91083.1| hypothetical protein
           MTR_4g104040 [Medicago truncatula]
           gi|388501442|gb|AFK38787.1| unknown [Medicago
           truncatula]
          Length = 170

 Score =  101 bits (252), Expect = 1e-19
 Identities = 71/130 (54%), Positives = 79/130 (60%), Gaps = 9/130 (6%)
 Frame = +3

Query: 6   PSKILKDDSFSIYEATLMKLKLGAKRDTSSQQMDEEVMATNDCSVSSQPSTEEANMDADC 185
           PSKILKDDSFSIYEATLMKLKLGAKRDT S Q+DEE     DCSV     T+E +MD D 
Sbjct: 20  PSKILKDDSFSIYEATLMKLKLGAKRDTPSVQIDEEEEFKKDCSV-----TDEVSMDVDS 74

Query: 186 TXXXXXXXXXXXDDGIVSMDTDCSSVITTSTSP----SLSDGVSTGNN----SQCSVSIL 341
           T            +    M  D SS + T+TSP     L + VST NN     Q +VSIL
Sbjct: 75  T-----PATEIASNSPTLMGRDYSSSV-TNTSPIVVTRLGESVSTENNLEQPRQNNVSIL 128

Query: 342 HFF-KIKDPG 368
           HFF KIKDPG
Sbjct: 129 HFFNKIKDPG 138


>gb|AFK46633.1| unknown [Lotus japonicus]
          Length = 179

 Score =  100 bits (249), Expect = 3e-19
 Identities = 68/131 (51%), Positives = 80/131 (61%), Gaps = 10/131 (7%)
 Frame = +3

Query: 6   PSKILKDDSFSIYEATLMKLKLGAKRDT----SSQQMDEEVMATNDCSVSSQPSTEEANM 173
           PSK+LKDDSFSIYEATLMKLKLGA+RD+    SSQ+M+E V  ++D           ANM
Sbjct: 16  PSKLLKDDSFSIYEATLMKLKLGAQRDSSARESSQEMEEIVTDSSD-----------ANM 64

Query: 174 DADCTXXXXXXXXXXXDDGIVSM---DTDCSSVITTSTSPSLSDGVSTGNNSQ---CSVS 335
           DAD              D  + M   DTDCSSV   + S S S GVSTGN+ Q    +VS
Sbjct: 65  DADRNLPNASRSHHSPGDDEIIMTGTDTDCSSV---TASASFSGGVSTGNSEQRKHGNVS 121

Query: 336 ILHFFKIKDPG 368
           ILHFFK+KD G
Sbjct: 122 ILHFFKLKDSG 132


>ref|XP_003549838.1| PREDICTED: uncharacterized protein LOC100811233 [Glycine max]
          Length = 171

 Score = 92.4 bits (228), Expect = 8e-17
 Identities = 61/125 (48%), Positives = 76/125 (60%), Gaps = 3/125 (2%)
 Frame = +3

Query: 3   SPSKILKDDSFSIYEATLMKLKLGAKRDTSSQQMDEEVMATNDCSVSSQPSTEEANMDAD 182
           SPSKILKDD+FSIYEATLMKLKLGA+RDTS          TND SV+S P  EEAN+  D
Sbjct: 18  SPSKILKDDTFSIYEATLMKLKLGARRDTSE--------VTNDSSVNS-PCAEEANLKPD 68

Query: 183 CTXXXXXXXXXXXDDGIVSMDTDCSSVITTSTSPSLSDGVSTGNN---SQCSVSILHFFK 353
                              MDT+     + ++SP +SD VS+GN+    Q +VSIL+FFK
Sbjct: 69  LNPATSTSC-----SETTMMDTE-----SDNSSPRVSDHVSSGNSEQRKQSNVSILYFFK 118

Query: 354 IKDPG 368
           ++D G
Sbjct: 119 VQDTG 123


>ref|XP_003525654.1| PREDICTED: uncharacterized protein LOC100807388 [Glycine max]
          Length = 173

 Score = 91.3 bits (225), Expect = 2e-16
 Identities = 60/125 (48%), Positives = 75/125 (60%), Gaps = 3/125 (2%)
 Frame = +3

Query: 3   SPSKILKDDSFSIYEATLMKLKLGAKRDTSSQQMDEEVMATNDCSVSSQPSTEEANMDAD 182
           SPSKILKDD+FS YEATLMKL LGA+RDTS          TND SV+S PS EEAN+  D
Sbjct: 18  SPSKILKDDTFSFYEATLMKLMLGARRDTSE--------VTNDSSVNS-PSAEEANLKPD 68

Query: 183 CTXXXXXXXXXXXDDGIVSMDTDCSSVITTSTSPSLSDGVSTGNN---SQCSVSILHFFK 353
                              MDT+  +    ++SP ++D VS+G++    Q +VSILHFFK
Sbjct: 69  FNPATSTSC-----SETTMMDTESDN---DNSSPRVTDHVSSGSSEQLKQSNVSILHFFK 120

Query: 354 IKDPG 368
           +KD G
Sbjct: 121 VKDTG 125


>ref|XP_002321678.1| predicted protein [Populus trichocarpa] gi|118482167|gb|ABK93013.1|
           unknown [Populus trichocarpa]
           gi|222868674|gb|EEF05805.1| predicted protein [Populus
           trichocarpa]
          Length = 189

 Score = 65.9 bits (159), Expect = 8e-09
 Identities = 46/117 (39%), Positives = 66/117 (56%), Gaps = 3/117 (2%)
 Frame = +3

Query: 9   SKILKDDSFSIYEATLMKLKLGAKRDTSSQQMDEEVMATNDCSVSSQPSTEEANMDADCT 188
           SKILKDD+ SIYEATLMKLKLG++RD SS   +E V   ++ S +S  S  E+N  +   
Sbjct: 20  SKILKDDTLSIYEATLMKLKLGSQRDQSS-PFEETVEMESESSTTSASSFVESNNTSTTA 78

Query: 189 XXXXXXXXXXXDDGIVSMDTDCSSVITTSTSPSLSDGVSTGNNS---QCSVSILHFF 350
                      D+ ++++D+D SS    S   S S   STG++      +VS+L+ F
Sbjct: 79  LKSLQHVITSPDEEVMTIDSDSSS---ASDQLSFSAMQSTGDSKDQRSRNVSVLYLF 132


Top