BLASTX nr result

ID: Glycyrrhiza24_contig00008170 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00008170
         (948 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003556209.1| PREDICTED: uncharacterized protein LOC100803...   253   5e-65
ref|XP_003536377.1| PREDICTED: RNA-binding protein 7-like [Glyci...   253   6e-65
gb|ACJ85779.1| unknown [Medicago truncatula]                          223   2e-58
ref|XP_003592001.1| Peptidyl-prolyl cis-trans isomerase [Medicag...   223   5e-56
gb|ABC86742.1| RNA recognition motif-containing protein [Vitis p...   196   9e-48

>ref|XP_003556209.1| PREDICTED: uncharacterized protein LOC100803118 [Glycine max]
          Length = 196

 Score =  253 bits (646), Expect = 5e-65
 Identities = 137/208 (65%), Positives = 149/208 (71%), Gaps = 1/208 (0%)
 Frame = -3

Query: 826 MSGNTNCTVYIGNLDERVTDRVLYDILIQAGRVVDLHIPKDKDSEKPKGYAFAEYETEEI 647
           MSGN+NC+VYIGNLDERVTDRVLYDILIQAGRVVDLHIPKDK+SEKPKG+AFAEYETEEI
Sbjct: 1   MSGNSNCSVYIGNLDERVTDRVLYDILIQAGRVVDLHIPKDKESEKPKGFAFAEYETEEI 60

Query: 646 ADYAVRLFSGLVTLYNRTLKFAXXXXXXXXXXXXISGKDKXXXXXXXXXXXXXXXSQRPR 467
           ADYAVRLFSGL+TLYNRTLKFA            ISG+DK               SQRPR
Sbjct: 61  ADYAVRLFSGLITLYNRTLKFA------------ISGRDKTTSNGSTAIAPTLNSSQRPR 108

Query: 466 PYPVPISNSENFQHSTRLSIPDRFSDYPVNYAQV-PPRVTXXXXXXXXXHTGNDYEYSRR 290
           PYPVPI+NSENFQH  RLS PDRFSDYPVN +QV P RVT         ++GN+YEYSRR
Sbjct: 109 PYPVPINNSENFQHPARLSTPDRFSDYPVNNSQVLPSRVTDQSSGYGSHYSGNNYEYSRR 168

Query: 289 AFGATLXXXXXXXXXXXXXXXPVPYHSY 206
           AFGATL               P+ Y SY
Sbjct: 169 AFGATLDSISRSRSRHFDKSSPISYPSY 196


>ref|XP_003536377.1| PREDICTED: RNA-binding protein 7-like [Glycine max]
          Length = 186

 Score =  253 bits (645), Expect = 6e-65
 Identities = 133/186 (71%), Positives = 145/186 (77%), Gaps = 1/186 (0%)
 Frame = -3

Query: 826 MSGNTNCTVYIGNLDERVTDRVLYDILIQAGRVVDLHIPKDKDSEKPKGYAFAEYETEEI 647
           MSGN+NC+VYIGNLDERVTDRVLYDILIQAGRVVDLHIPKDK+SEKPKG+AFAEYETEEI
Sbjct: 1   MSGNSNCSVYIGNLDERVTDRVLYDILIQAGRVVDLHIPKDKESEKPKGFAFAEYETEEI 60

Query: 646 ADYAVRLFSGLVTLYNRTLKFAXXXXXXXXXXXXISGKDKXXXXXXXXXXXXXXXSQRPR 467
           ADYAVRLFSGL+TLYNRTLKFA            ISG+DK               SQRPR
Sbjct: 61  ADYAVRLFSGLITLYNRTLKFA------------ISGRDKTTSNGSTAITPTSNSSQRPR 108

Query: 466 PYPVPISNSENFQHSTRLSIPDRFSDYPVNYAQV-PPRVTXXXXXXXXXHTGNDYEYSRR 290
           PYPV I+NSENFQHS RLS PDRFSD+PVNY+QV P RVT         ++GN+YEYSRR
Sbjct: 109 PYPVSINNSENFQHSARLSTPDRFSDHPVNYSQVLPSRVTDQSSGYGSHYSGNNYEYSRR 168

Query: 289 AFGATL 272
           AFGATL
Sbjct: 169 AFGATL 174


>gb|ACJ85779.1| unknown [Medicago truncatula]
          Length = 218

 Score =  223 bits (567), Expect(2) = 2e-58
 Identities = 124/210 (59%), Positives = 138/210 (65%), Gaps = 5/210 (2%)
 Frame = -3

Query: 826 MSGNTNCTVYIGNLDERVTDRVLYDILIQAGRVVDLHIPKDKDSEKPKGYAFAEYETEEI 647
           MSGN++CTVYIGNLDERVTDR+LYDILIQAGRVVDLHIPKDK+SEKPKG+AFAEYETEEI
Sbjct: 1   MSGNSSCTVYIGNLDERVTDRILYDILIQAGRVVDLHIPKDKESEKPKGFAFAEYETEEI 60

Query: 646 ADYAVRLFSGLVTLYNRTLKFAXXXXXXXXXXXXISGKDKXXXXXXXXXXXXXXXSQRPR 467
           ADYAVRLFSGLVTLY RTLKFA            +SG+DK               SQRPR
Sbjct: 61  ADYAVRLFSGLVTLYKRTLKFA-------SANKQLSGRDKNTPNSSTATTPSSNSSQRPR 113

Query: 466 PYPVPISNSENFQHSTRLSIPDRFSDYPVNYAQVPP-----RVTXXXXXXXXXHTGNDYE 302
           PYPV I++SENFQHS R SIPDRFSD  +NY+QV       R T           GN  +
Sbjct: 114 PYPVQINSSENFQHSARQSIPDRFSDRALNYSQVGELLGRNRATNQSNAYGSHFGGNHLD 173

Query: 301 YSRRAFGATLXXXXXXXXXXXXXXXPVPYH 212
           +SRRAFG  L               P+ YH
Sbjct: 174 HSRRAFGEELDNASRSRPRRPDTVSPISYH 203



 Score = 30.0 bits (66), Expect(2) = 2e-58
 Identities = 13/13 (100%), Positives = 13/13 (100%)
 Frame = -1

Query: 210 LTNIFNRSERLNF 172
           LTNIFNRSERLNF
Sbjct: 204 LTNIFNRSERLNF 216


>ref|XP_003592001.1| Peptidyl-prolyl cis-trans isomerase [Medicago truncatula]
           gi|355481049|gb|AES62252.1| Peptidyl-prolyl cis-trans
           isomerase [Medicago truncatula]
          Length = 200

 Score =  223 bits (568), Expect = 5e-56
 Identities = 122/190 (64%), Positives = 134/190 (70%), Gaps = 5/190 (2%)
 Frame = -3

Query: 826 MSGNTNCTVYIGNLDERVTDRVLYDILIQAGRVVDLHIPKDKDSEKPKGYAFAEYETEEI 647
           MSGN++CTVYIGNLDERVTDR+LYDILIQAGRVVDLHIPKDK+SEKPKG+AFAEYETEEI
Sbjct: 1   MSGNSSCTVYIGNLDERVTDRILYDILIQAGRVVDLHIPKDKESEKPKGFAFAEYETEEI 60

Query: 646 ADYAVRLFSGLVTLYNRTLKFAXXXXXXXXXXXXISGKDKXXXXXXXXXXXXXXXSQRPR 467
           ADYAVRLFSGLVTLY RTLKFA            ISG+DK               SQRPR
Sbjct: 61  ADYAVRLFSGLVTLYKRTLKFA------------ISGRDKNTPNSSTATTPSSNSSQRPR 108

Query: 466 PYPVPISNSENFQHSTRLSIPDRFSDYPVNYAQVPP-----RVTXXXXXXXXXHTGNDYE 302
           PYPV I++SENFQHS R SIPDRFSD  +NY+QV       R T           GN  +
Sbjct: 109 PYPVQINSSENFQHSARQSIPDRFSDRALNYSQVGELLGRNRATNQSNAYGSHFGGNHLD 168

Query: 301 YSRRAFGATL 272
           +SRRAFG  L
Sbjct: 169 HSRRAFGEEL 178


>gb|ABC86742.1| RNA recognition motif-containing protein [Vitis pseudoreticulata]
          Length = 194

 Score =  196 bits (497), Expect = 9e-48
 Identities = 110/209 (52%), Positives = 130/209 (62%), Gaps = 2/209 (0%)
 Frame = -3

Query: 826 MSGNTNCTVYIGNLDERVTDRVLYDILIQAGRVVDLHIPKDKDSEKPKGYAFAEYETEEI 647
           MS  + C+VYIGNLDERV+DRVLYDILIQAGRVVDL+IP+DK++++PKG+AFAEYETEEI
Sbjct: 1   MSAKSGCSVYIGNLDERVSDRVLYDILIQAGRVVDLYIPRDKETDRPKGFAFAEYETEEI 60

Query: 646 ADYAVRLFSGLVTLYNRTLKFAXXXXXXXXXXXXISGKDKXXXXXXXXXXXXXXXSQRPR 467
           ADYAV+LFSGLVTLYNRTLKFA            ISG+DK                  P+
Sbjct: 61  ADYAVKLFSGLVTLYNRTLKFA------------ISGQDKPSSAAITPTSNSSL---EPK 105

Query: 466 PYPVPISNSENFQHSTRLSIPDRFSDYPVNYAQVPPR--VTXXXXXXXXXHTGNDYEYSR 293
           P+PVP +N EN QHS  L  P R + +PVNYAQVP                 G+ Y+YSR
Sbjct: 106 PHPVPFNNMENSQHSMGLRTPCRLAAHPVNYAQVPASSDTLHQPNRYSSQLDGHSYDYSR 165

Query: 292 RAFGATLXXXXXXXXXXXXXXXPVPYHSY 206
           R FGATL               P+ Y SY
Sbjct: 166 RVFGATLDSISRTRSRYYDSSNPITYPSY 194


Top