BLASTX nr result

ID: Glycyrrhiza24_contig00008162 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00008162
         (1754 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003521747.1| PREDICTED: KH domain-containing protein At4g...   653   0.0  
ref|XP_003554712.1| PREDICTED: insulin-like growth factor 2 mRNA...   652   0.0  
ref|XP_002521945.1| Poly(rC)-binding protein, putative [Ricinus ...   601   e-169
emb|CBI35182.3| unnamed protein product [Vitis vinifera]              592   e-166
ref|XP_002269249.1| PREDICTED: poly(rC)-binding protein 3-like [...   592   e-166

>ref|XP_003521747.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine max]
          Length = 443

 Score =  653 bits (1684), Expect = 0.0
 Identities = 337/415 (81%), Positives = 348/415 (83%), Gaps = 4/415 (0%)
 Frame = +3

Query: 279  VEEKKWPGWPGESVFRMLVPAQKVGGIIGRKGEFIKKIVEETRARVKILDGPPGNAERAV 458
            V EKKWPGWPGESVFRMLVPAQKVGGIIGRKGEFIKKIVEETRARVKILDGPPG  +RAV
Sbjct: 32   VAEKKWPGWPGESVFRMLVPAQKVGGIIGRKGEFIKKIVEETRARVKILDGPPGTVQRAV 91

Query: 459  MVSAKEEPDSSLPPAVDGLLRVQKRVIDGLESDFTHAPSGVAGKVSTKLLVPASQAGSLI 638
            M+SAKEEP SS+PPAVDGLLR+ KR+IDGLESDFTHAPSGVAGKVSTKLLVPASQAGSLI
Sbjct: 92   MISAKEEPGSSVPPAVDGLLRIHKRIIDGLESDFTHAPSGVAGKVSTKLLVPASQAGSLI 151

Query: 639  GKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDPTGVHKALELIASHLRKF 818
            GKQGGTVKSIQEASNCIVRVLGAEDLP+FALQDDRVVEVVGDP GVHKALELIASHLRKF
Sbjct: 152  GKQGGTVKSIQEASNCIVRVLGAEDLPIFALQDDRVVEVVGDPAGVHKALELIASHLRKF 211

Query: 819  LVDRSVIPIFEMNMQMANPHHHVEHIPPQQSWXXXXXXXXXXXXXXXXXXXXXXXXXXXX 998
            LVDR VIPIFEMNMQ ANP HH EH+PP QSW                            
Sbjct: 212  LVDRGVIPIFEMNMQTANP-HHAEHMPPHQSW--GPSQGLPPNVGGGPGFGPPSQYMPPP 268

Query: 999  RQFDSYYPPVEMPPPVDKQPHQGISAYGRDASIGVHAPSNTQSAPSMVTQITQQMQVPLS 1178
            RQ DSYYP  EMPPPVD+QPHQGISAYGRDASIGVHA SNTQSAPS+VTQITQQMQ+PLS
Sbjct: 269  RQLDSYYPSAEMPPPVDRQPHQGISAYGRDASIGVHASSNTQSAPSIVTQITQQMQIPLS 328

Query: 1179 YADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEISGTASEVQTAQQLIQNFM-- 1352
            YADAVIGTAGASISYIRRASGATVTIQE RGVPGEMTVEISGTAS+VQTAQQLIQNFM  
Sbjct: 329  YADAVIGTAGASISYIRRASGATVTIQEARGVPGEMTVEISGTASQVQTAQQLIQNFMAE 388

Query: 1353 --XXXXXXXXXXXXXXXXXXXYNSYPAHGSVYASPPSNPGHAGGYGSVYGANYGY 1511
                                 YNSYPAHGSVYASPPSNPGHAGGYGSVYGANYGY
Sbjct: 389  AAAAAAAPAQPQTTVPAADQGYNSYPAHGSVYASPPSNPGHAGGYGSVYGANYGY 443


>ref|XP_003554712.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
            [Glycine max]
          Length = 446

 Score =  652 bits (1681), Expect = 0.0
 Identities = 337/415 (81%), Positives = 348/415 (83%), Gaps = 4/415 (0%)
 Frame = +3

Query: 279  VEEKKWPGWPGESVFRMLVPAQKVGGIIGRKGEFIKKIVEETRARVKILDGPPGNAERAV 458
            V EKKWPGWPGESVFRMLVPAQKVGGIIGRKGEFIKKIVEETRARVKILDGPPG  +RAV
Sbjct: 35   VAEKKWPGWPGESVFRMLVPAQKVGGIIGRKGEFIKKIVEETRARVKILDGPPGTVQRAV 94

Query: 459  MVSAKEEPDSSLPPAVDGLLRVQKRVIDGLESDFTHAPSGVAGKVSTKLLVPASQAGSLI 638
            M+SAKEEP SS+PPAVDGLLRV KR+IDGLESDFTHAPSGVAGKVSTKLLVPASQAGSLI
Sbjct: 95   MISAKEEPGSSVPPAVDGLLRVHKRIIDGLESDFTHAPSGVAGKVSTKLLVPASQAGSLI 154

Query: 639  GKQGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDPTGVHKALELIASHLRKF 818
            GKQGGTVKSIQEASNCIVRVLGAEDLP+FALQDDRVVEVVGDPTGVHKALELIASHLRKF
Sbjct: 155  GKQGGTVKSIQEASNCIVRVLGAEDLPIFALQDDRVVEVVGDPTGVHKALELIASHLRKF 214

Query: 819  LVDRSVIPIFEMNMQMANPHHHVEHIPPQQSWXXXXXXXXXXXXXXXXXXXXXXXXXXXX 998
            LVDR VIPIFEMNMQ AN  HH EH+PP QSW                            
Sbjct: 215  LVDRGVIPIFEMNMQTANT-HHAEHMPPHQSW--GPPQGLPPNVGGGSGFGPPSQYMPPP 271

Query: 999  RQFDSYYPPVEMPPPVDKQPHQGISAYGRDASIGVHAPSNTQSAPSMVTQITQQMQVPLS 1178
            RQ DSYYPP EMPPPVD+QPHQGISAYGRDASIGVHA SNTQSAPS+VTQITQQMQ+PLS
Sbjct: 272  RQLDSYYPPAEMPPPVDRQPHQGISAYGRDASIGVHASSNTQSAPSIVTQITQQMQIPLS 331

Query: 1179 YADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEISGTASEVQTAQQLIQNFM-- 1352
            YADAVIGTAGASISYIRRASGATVTIQE RGVPGEMTVEISGTAS+VQTAQQLIQNFM  
Sbjct: 332  YADAVIGTAGASISYIRRASGATVTIQEARGVPGEMTVEISGTASQVQTAQQLIQNFMAE 391

Query: 1353 --XXXXXXXXXXXXXXXXXXXYNSYPAHGSVYASPPSNPGHAGGYGSVYGANYGY 1511
                                 YNSYPAHGS+YASPPSNPGHAGGY SVYGANYGY
Sbjct: 392  AAAAAAAPAQPQTTVPAADQGYNSYPAHGSLYASPPSNPGHAGGYSSVYGANYGY 446


>ref|XP_002521945.1| Poly(rC)-binding protein, putative [Ricinus communis]
            gi|223538749|gb|EEF40349.1| Poly(rC)-binding protein,
            putative [Ricinus communis]
          Length = 548

 Score =  601 bits (1550), Expect = e-169
 Identities = 307/412 (74%), Positives = 337/412 (81%), Gaps = 3/412 (0%)
 Frame = +3

Query: 285  EKKWPGWPGESVFRMLVPAQKVGGIIGRKGEFIKKIVEETRARVKILDGPPGNAERAVMV 464
            EKKWPGWPGESVFRMLVPAQKVG IIGRKGEFIKKIVEETRAR+KILDGPPG  ERAVMV
Sbjct: 142  EKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMV 201

Query: 465  SAKEEPDSSLPPAVDGLLRVQKRVIDGLESDFTHAPSGVAGKVSTKLLVPASQAGSLIGK 644
            SAKEEPDS+LPPA+DGLLRV KR++DGL+ D +HA SG   KVST+LLVPASQAGSLIGK
Sbjct: 202  SAKEEPDSALPPAMDGLLRVHKRIVDGLDGDSSHASSGTGTKVSTRLLVPASQAGSLIGK 261

Query: 645  QGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDPTGVHKALELIASHLRKFLV 824
            QGGTVKSIQEAS+C+VRVLGAEDLPVFALQDDRVVEV+GD  GVHKA+ELIASHLRKFLV
Sbjct: 262  QGGTVKSIQEASSCVVRVLGAEDLPVFALQDDRVVEVLGDAAGVHKAVELIASHLRKFLV 321

Query: 825  DRSVIPIFEMNMQMANPHHHVEHIPPQQSWXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQ 1004
            DRS+IP+FEM+MQM NP  H+EH+PP QSW                            RQ
Sbjct: 322  DRSIIPLFEMHMQMQNP-PHMEHMPPHQSW---GPPQGIPPNAGGGPGYGNPQYMPPPRQ 377

Query: 1005 FDSYYPPVEMPPPVDKQPHQGISAYGRDASIGVHAPSNTQSAPSMVTQITQQMQVPLSYA 1184
             ++YYPP ++PPP++KQPHQGISAYGR+A +GVH  SN+Q+APSM+TQITQQMQ+PLSYA
Sbjct: 378  IENYYPPADLPPPMEKQPHQGISAYGREAPMGVHGSSNSQAAPSMITQITQQMQIPLSYA 437

Query: 1185 DAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEISGTASEVQTAQQLIQNFMXXXX 1364
            DAVIGTAG SISYIRRASGATVTIQETRGVPGEMTVEISGTAS+VQTAQQLIQNFM    
Sbjct: 438  DAVIGTAGTSISYIRRASGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFM-AEA 496

Query: 1365 XXXXXXXXXXXXXXXYNSYPAHGSVYASPPSNPGHA---GGYGSVYGANYGY 1511
                           YN Y AHGSVYASPPSNPGHA   GGYGSVYG NYGY
Sbjct: 497  GAPTQAQTGGSTDQGYNPYAAHGSVYASPPSNPGHAGHTGGYGSVYGTNYGY 548


>emb|CBI35182.3| unnamed protein product [Vitis vinifera]
          Length = 511

 Score =  592 bits (1526), Expect = e-166
 Identities = 307/412 (74%), Positives = 333/412 (80%), Gaps = 3/412 (0%)
 Frame = +3

Query: 285  EKKWPGWPGESVFRMLVPAQKVGGIIGRKGEFIKKIVEETRARVKILDGPPGNAERAVMV 464
            EK+WPGWPGESVFRMLVPAQKVG IIGRKGEFIKKIVEETRAR+KILDGPPG AERAVMV
Sbjct: 107  EKRWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAVMV 166

Query: 465  SAKEEPDSSLPPAVDGLLRVQKRVIDGLESDFTHAPSGVAGKVSTKLLVPASQAGSLIGK 644
            SAKEEPDSSLPPA+DGLL+V KR++DGLE D +H P G  GKVST+LLV ASQAGSLIGK
Sbjct: 167  SAKEEPDSSLPPAMDGLLKVHKRIVDGLEGDSSHMPPG--GKVSTRLLVAASQAGSLIGK 224

Query: 645  QGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDPTGVHKALELIASHLRKFLV 824
            QGGTVKSIQEASNCIVRVLGAEDLP+FALQDDRVVEVVG+P GVHKA+ELIASHLRKFLV
Sbjct: 225  QGGTVKSIQEASNCIVRVLGAEDLPIFALQDDRVVEVVGEPIGVHKAVELIASHLRKFLV 284

Query: 825  DRSVIPIFEMNMQMANPHHHVEHIPPQQSWXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQ 1004
            DRSVIP+FEM MQM+NP   +EH+PP Q W                            RQ
Sbjct: 285  DRSVIPLFEMQMQMSNP--PIEHMPPHQPW--GPPQGLPPNASGGPGFGPNPPYMPPPRQ 340

Query: 1005 FDSYYPPVEMPPPVDKQPHQGISAYGRDASIGVHAPSNTQSAPSMVTQITQQMQVPLSYA 1184
             DSYYPP E+PPPV+KQPHQGISAYGR+  +G HAPS+ Q APSM+TQ+TQQMQ+PLSYA
Sbjct: 341  LDSYYPPPELPPPVEKQPHQGISAYGREVPMGGHAPSSAQPAPSMITQVTQQMQIPLSYA 400

Query: 1185 DAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEISGTASEVQTAQQLIQNFMXXXX 1364
            DAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEI+GTAS+VQ AQQLIQNFM    
Sbjct: 401  DAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEINGTASQVQAAQQLIQNFM-AEA 459

Query: 1365 XXXXXXXXXXXXXXXYNSYPAHGSVYASPPSNPGHA---GGYGSVYGANYGY 1511
                           YNSY AHGS+YASP SNP HA   GGYG VYGANYGY
Sbjct: 460  AAPAQAQAGGSADQGYNSYAAHGSMYASPASNPAHASHTGGYGPVYGANYGY 511


>ref|XP_002269249.1| PREDICTED: poly(rC)-binding protein 3-like [Vitis vinifera]
          Length = 442

 Score =  592 bits (1526), Expect = e-166
 Identities = 307/412 (74%), Positives = 333/412 (80%), Gaps = 3/412 (0%)
 Frame = +3

Query: 285  EKKWPGWPGESVFRMLVPAQKVGGIIGRKGEFIKKIVEETRARVKILDGPPGNAERAVMV 464
            EK+WPGWPGESVFRMLVPAQKVG IIGRKGEFIKKIVEETRAR+KILDGPPG AERAVMV
Sbjct: 38   EKRWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAVMV 97

Query: 465  SAKEEPDSSLPPAVDGLLRVQKRVIDGLESDFTHAPSGVAGKVSTKLLVPASQAGSLIGK 644
            SAKEEPDSSLPPA+DGLL+V KR++DGLE D +H P G  GKVST+LLV ASQAGSLIGK
Sbjct: 98   SAKEEPDSSLPPAMDGLLKVHKRIVDGLEGDSSHMPPG--GKVSTRLLVAASQAGSLIGK 155

Query: 645  QGGTVKSIQEASNCIVRVLGAEDLPVFALQDDRVVEVVGDPTGVHKALELIASHLRKFLV 824
            QGGTVKSIQEASNCIVRVLGAEDLP+FALQDDRVVEVVG+P GVHKA+ELIASHLRKFLV
Sbjct: 156  QGGTVKSIQEASNCIVRVLGAEDLPIFALQDDRVVEVVGEPIGVHKAVELIASHLRKFLV 215

Query: 825  DRSVIPIFEMNMQMANPHHHVEHIPPQQSWXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQ 1004
            DRSVIP+FEM MQM+NP   +EH+PP Q W                            RQ
Sbjct: 216  DRSVIPLFEMQMQMSNP--PIEHMPPHQPW--GPPQGLPPNASGGPGFGPNPPYMPPPRQ 271

Query: 1005 FDSYYPPVEMPPPVDKQPHQGISAYGRDASIGVHAPSNTQSAPSMVTQITQQMQVPLSYA 1184
             DSYYPP E+PPPV+KQPHQGISAYGR+  +G HAPS+ Q APSM+TQ+TQQMQ+PLSYA
Sbjct: 272  LDSYYPPPELPPPVEKQPHQGISAYGREVPMGGHAPSSAQPAPSMITQVTQQMQIPLSYA 331

Query: 1185 DAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEISGTASEVQTAQQLIQNFMXXXX 1364
            DAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEI+GTAS+VQ AQQLIQNFM    
Sbjct: 332  DAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEINGTASQVQAAQQLIQNFM-AEA 390

Query: 1365 XXXXXXXXXXXXXXXYNSYPAHGSVYASPPSNPGHA---GGYGSVYGANYGY 1511
                           YNSY AHGS+YASP SNP HA   GGYG VYGANYGY
Sbjct: 391  AAPAQAQAGGSADQGYNSYAAHGSMYASPASNPAHASHTGGYGPVYGANYGY 442


Top