BLASTX nr result

ID: Glycyrrhiza24_contig00008144 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00008144
         (511 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003516554.1| PREDICTED: d-2-hydroxyglutarate dehydrogenas...   189   2e-46
gb|AFK45705.1| unknown [Medicago truncatula]                          170   1e-40
ref|XP_003612098.1| D-2-hydroxyglutarate dehydrogenase [Medicago...   170   1e-40
ref|XP_002310828.1| predicted protein [Populus trichocarpa] gi|2...   111   5e-23
gb|ABK96747.1| unknown [Populus trichocarpa x Populus deltoides]      110   1e-22

>ref|XP_003516554.1| PREDICTED: d-2-hydroxyglutarate dehydrogenase, mitochondrial-like
           [Glycine max]
          Length = 633

 Score =  189 bits (480), Expect = 2e-46
 Identities = 100/162 (61%), Positives = 115/162 (70%), Gaps = 1/162 (0%)
 Frame = +1

Query: 28  MVNRNNSRGTLRFLTRTFYPFFHHPRNPVPLPPATSCYHFTTVTGSDENHRQLLRSIVRG 207
           M N N+     RFL R+F PFFH   N   LP ATSC   T+ T  DE   QL  +IVRG
Sbjct: 70  MANHNS-----RFLLRSFIPFFHRRMNSPLLPSATSCPRLTSGTAFDEKFTQLPSNIVRG 124

Query: 208 EHK-ALSLFNPLRNSMKTKQLGVGTPSGIPHRCYGSMAGLVQRNPGFLKLNDDDVRYFEG 384
           +H+  LS FNP RN  +TKQ GVG    I H+C+GSMAG VQRNP F KLNDDDVRY EG
Sbjct: 125 DHRQVLSFFNPSRNFAETKQWGVG----IRHKCFGSMAGSVQRNPRFSKLNDDDVRYLEG 180

Query: 385 ILGTKNVIQDEEKLIAANTDWMRKYKGSSKLLLQPSSTDQVS 510
           ILG+KNV+QDE+KL+ +NTDWM KYKGSSKLLLQP + DQVS
Sbjct: 181 ILGSKNVVQDEDKLVTSNTDWMHKYKGSSKLLLQPRTADQVS 222


>gb|AFK45705.1| unknown [Medicago truncatula]
          Length = 373

 Score =  170 bits (430), Expect = 1e-40
 Identities = 95/162 (58%), Positives = 110/162 (67%), Gaps = 1/162 (0%)
 Frame = +1

Query: 28  MVNRNNSRGTLRFLTRTFYPFFHHPRNPVPLPPATSCYHFTTVTGSDENHRQLLRSIVRG 207
           M+NRN SR TLRFLTR    F HH  NP           FT+ T  DEN +QL R+++  
Sbjct: 1   MINRN-SRNTLRFLTR----FHHHQHNPSS--------QFTSKTVFDENCKQLKRNVLPT 47

Query: 208 EHKALSLFNPLRNSMKTKQLGVGTPSGIPHRCY-GSMAGLVQRNPGFLKLNDDDVRYFEG 384
           E+KA + FNPL N  K KQLG G   GI  +CY GSM G VQR+  F +LNDDDVRYFE 
Sbjct: 48  ENKAFNFFNPLTNFFKNKQLGHGISCGILQKCYYGSMGGAVQRSSRFSELNDDDVRYFEE 107

Query: 385 ILGTKNVIQDEEKLIAANTDWMRKYKGSSKLLLQPSSTDQVS 510
           ILG KNV+QDE+KL  AN DWM KYKGSSKL+LQP +TDQVS
Sbjct: 108 ILGKKNVVQDEDKLSVANIDWMHKYKGSSKLILQPCNTDQVS 149


>ref|XP_003612098.1| D-2-hydroxyglutarate dehydrogenase [Medicago truncatula]
           gi|355513433|gb|AES95056.1| D-2-hydroxyglutarate
           dehydrogenase [Medicago truncatula]
          Length = 724

 Score =  170 bits (430), Expect = 1e-40
 Identities = 95/162 (58%), Positives = 110/162 (67%), Gaps = 1/162 (0%)
 Frame = +1

Query: 28  MVNRNNSRGTLRFLTRTFYPFFHHPRNPVPLPPATSCYHFTTVTGSDENHRQLLRSIVRG 207
           M+NRN SR TLRFLTR    F HH  NP           FT+ T  DEN +QL R+++  
Sbjct: 1   MINRN-SRNTLRFLTR----FHHHQHNPSS--------QFTSKTVFDENCKQLKRNVLPT 47

Query: 208 EHKALSLFNPLRNSMKTKQLGVGTPSGIPHRCY-GSMAGLVQRNPGFLKLNDDDVRYFEG 384
           E+KA + FNPL N  K KQLG G   GI  +CY GSM G VQR+  F +LNDDDVRYFE 
Sbjct: 48  ENKAFNFFNPLTNFFKNKQLGHGISCGILQKCYYGSMGGAVQRSSRFSELNDDDVRYFEE 107

Query: 385 ILGTKNVIQDEEKLIAANTDWMRKYKGSSKLLLQPSSTDQVS 510
           ILG KNV+QDE+KL  AN DWM KYKGSSKL+LQP +TDQVS
Sbjct: 108 ILGKKNVVQDEDKLSVANIDWMHKYKGSSKLILQPCNTDQVS 149


>ref|XP_002310828.1| predicted protein [Populus trichocarpa] gi|222853731|gb|EEE91278.1|
           predicted protein [Populus trichocarpa]
          Length = 530

 Score =  111 bits (278), Expect = 5e-23
 Identities = 57/112 (50%), Positives = 76/112 (67%)
 Frame = +1

Query: 175 HRQLLRSIVRGEHKALSLFNPLRNSMKTKQLGVGTPSGIPHRCYGSMAGLVQRNPGFLKL 354
           HR L +SI    ++ L+  NP+  S+    LG G  +   +R +GS+A  V+RNP F  L
Sbjct: 8   HRLLKQSIKSLVNRQLTSNNPIYRSISALPLGNGGRNPQLYRSFGSLATKVERNPSFSSL 67

Query: 355 NDDDVRYFEGILGTKNVIQDEEKLIAANTDWMRKYKGSSKLLLQPSSTDQVS 510
           N DDV YF+G+LG KNV+QDE++L  AN DWM KYKGSSKLLL P +T++VS
Sbjct: 68  NSDDVSYFKGVLGEKNVVQDEDRLETANIDWMHKYKGSSKLLLLPRNTEEVS 119


>gb|ABK96747.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 224

 Score =  110 bits (275), Expect = 1e-22
 Identities = 56/112 (50%), Positives = 76/112 (67%)
 Frame = +1

Query: 175 HRQLLRSIVRGEHKALSLFNPLRNSMKTKQLGVGTPSGIPHRCYGSMAGLVQRNPGFLKL 354
           HR L +SI    ++ L+  NP+  S+    LG G  +   +R +GS+A  V+RNP F  L
Sbjct: 8   HRLLKQSIKSLVNRQLTSNNPIYRSISALPLGNGGRNPQLYRSFGSLATKVERNPSFSSL 67

Query: 355 NDDDVRYFEGILGTKNVIQDEEKLIAANTDWMRKYKGSSKLLLQPSSTDQVS 510
           N DD+ YF+G+LG KNV+QDE++L  AN DWM KYKGSSKLLL P +T++VS
Sbjct: 68  NSDDLSYFKGVLGEKNVVQDEDRLETANIDWMHKYKGSSKLLLLPRNTEEVS 119


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