BLASTX nr result

ID: Glycyrrhiza24_contig00008095 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00008095
         (977 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK33504.1| unknown [Lotus japonicus]                              374   e-101
ref|XP_003545948.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H...   359   6e-97
gb|ACU19159.1| unknown [Glycine max]                                  355   7e-96
ref|XP_003543049.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H...   354   2e-95
ref|XP_003529322.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H...   316   6e-84

>gb|AFK33504.1| unknown [Lotus japonicus]
          Length = 245

 Score =  374 bits (961), Expect = e-101
 Identities = 188/231 (81%), Positives = 198/231 (85%), Gaps = 11/231 (4%)
 Frame = -3

Query: 831 MAFQHYCSHESKTIPNAVTETENPNGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHV 652
           MAFQHY S E KT PN+VTETE+ NGCFDCNICLD AHEPVVTLCGHLYCWPCIYKWLHV
Sbjct: 1   MAFQHYFSQELKTTPNSVTETESSNGCFDCNICLDIAHEPVVTLCGHLYCWPCIYKWLHV 60

Query: 651 QSDSLGPDEHPQCPVCKVDISHSTMIPLYGRGQAPPGGKSSRGDVFIPPRPTASGAQALL 472
           QSDSL PDEHPQCPVCKVDISHSTM+PLYGRG AP GGK+S  D+F PPRP ASGAQALL
Sbjct: 61  QSDSLAPDEHPQCPVCKVDISHSTMVPLYGRGHAPRGGKASCCDLFTPPRPPASGAQALL 120

Query: 471 TTA-----SQSGQQLQYRNPYQGQHFSSPPYQEE--DATSQMLNLGAS--MTPGSH-HP- 325
            T+     SQ  QQLQYRNPYQGQ+FSSP YQEE  DATSQM NLGAS   TPGSH HP 
Sbjct: 121 GTSSSSQNSQQQQQLQYRNPYQGQYFSSPLYQEEDDDATSQMFNLGASTMTTPGSHPHPV 180

Query: 324 VGMFGEMVFARVFGNSENLFAYPNSYQLMGSNSSRLRRQEMQADKFLNRIS 172
           VGMFGEMVFARVFGNSENL+A PNS+QLM SN SR+RRQEMQADKFLNRIS
Sbjct: 181 VGMFGEMVFARVFGNSENLYASPNSHQLMRSNGSRMRRQEMQADKFLNRIS 231


>ref|XP_003545948.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H1-like [Glycine max]
          Length = 232

 Score =  359 bits (921), Expect = 6e-97
 Identities = 177/223 (79%), Positives = 188/223 (84%), Gaps = 3/223 (1%)
 Frame = -3

Query: 831 MAFQHYCSHESKTIPNAVTETENPNGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHV 652
           MAFQHY S + KTIPNA TETEN NGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHV
Sbjct: 1   MAFQHYISRDLKTIPNAATETENSNGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHV 60

Query: 651 QSDSLGPDEHPQCPVCKVDISHSTMIPLYGRGQAPPG-GKSSRGDVFIPPRPTASGAQAL 475
           QSDSL PDEHPQCPVCK DIS+STM+PLYGRG A    GK+S  DVFIPPRP+AS  QAL
Sbjct: 61  QSDSLAPDEHPQCPVCKADISNSTMVPLYGRGHAATAEGKTSSCDVFIPPRPSASCVQAL 120

Query: 474 LTTASQSGQQLQYRNPYQGQHFSSPPYQEE-DATSQMLNLGASMTPGSHHPV-GMFGEMV 301
           L T+SQ GQ L YRNPYQG +FSS PYQEE DATSQMLNLG+      HHPV GMFGEMV
Sbjct: 121 LATSSQRGQHLPYRNPYQGHYFSSHPYQEEDDATSQMLNLGS-----HHHPVTGMFGEMV 175

Query: 300 FARVFGNSENLFAYPNSYQLMGSNSSRLRRQEMQADKFLNRIS 172
           +ARVFGN ENL+AYPNSYQLMGS + RLRRQEMQA K LNRIS
Sbjct: 176 YARVFGNPENLYAYPNSYQLMGSATPRLRRQEMQAHKSLNRIS 218


>gb|ACU19159.1| unknown [Glycine max]
          Length = 232

 Score =  355 bits (912), Expect = 7e-96
 Identities = 176/223 (78%), Positives = 186/223 (83%), Gaps = 3/223 (1%)
 Frame = -3

Query: 831 MAFQHYCSHESKTIPNAVTETENPNGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHV 652
           MAFQHY S + KTIPNA TETEN NGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHV
Sbjct: 1   MAFQHYISRDLKTIPNAATETENSNGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHV 60

Query: 651 QSDSLGPDEHPQCPVCKVDISHSTMIPLYGRGQAPPG-GKSSRGDVFIPPRPTASGAQAL 475
           QSDSL PDEHPQCPVCK DIS+STM+PLYGRG A    GK+S  DVFIPPRP AS  QAL
Sbjct: 61  QSDSLAPDEHPQCPVCKADISNSTMVPLYGRGHAATAEGKTSSCDVFIPPRPFASCVQAL 120

Query: 474 LTTASQSGQQLQYRNPYQGQHFSSPPYQEE-DATSQMLNLGASMTPGSHHPV-GMFGEMV 301
           L T+SQ GQ L YRNPYQG +FS  PYQEE DATSQMLNLG+      HHPV GMFGEMV
Sbjct: 121 LATSSQRGQHLPYRNPYQGHYFSFHPYQEEDDATSQMLNLGS-----HHHPVTGMFGEMV 175

Query: 300 FARVFGNSENLFAYPNSYQLMGSNSSRLRRQEMQADKFLNRIS 172
           +ARVFGN ENL+AYPNSYQLMGS + RLRRQEMQA K LNRIS
Sbjct: 176 YARVFGNPENLYAYPNSYQLMGSATPRLRRQEMQAHKSLNRIS 218


>ref|XP_003543049.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H1-like [Glycine max]
          Length = 232

 Score =  354 bits (908), Expect = 2e-95
 Identities = 177/224 (79%), Positives = 189/224 (84%), Gaps = 4/224 (1%)
 Frame = -3

Query: 831 MAFQHYCSHESKTIPNAVTETENPNGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHV 652
           MAFQHY S + KTIPNAVTE ENPNGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHV
Sbjct: 1   MAFQHYISRDLKTIPNAVTEAENPNGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHV 60

Query: 651 QSDSLGPDEHPQCPVCKVDISHSTMIPLYGRGQA--PPGGKSSRGDVFIPPRPTASGAQA 478
           QSDSL PDEHPQCPVCK DIS+STM+PLYGRG A     GK++  DVFIPPRP+AS AQA
Sbjct: 61  QSDSLPPDEHPQCPVCKADISNSTMVPLYGRGHAATTAEGKTASCDVFIPPRPSASCAQA 120

Query: 477 LLTTASQSGQQLQYRNPYQGQHFSSPPYQEE-DATSQMLNLGASMTPGSHHPV-GMFGEM 304
           LL T SQ GQ L YRNPYQG +F+S PYQEE DATSQMLNLG+      HHPV GMFGEM
Sbjct: 121 LLAT-SQRGQHLPYRNPYQGHYFTSHPYQEEDDATSQMLNLGS-----HHHPVTGMFGEM 174

Query: 303 VFARVFGNSENLFAYPNSYQLMGSNSSRLRRQEMQADKFLNRIS 172
           V+ARVFGN ENL+AYPNSYQLMGS + RLRRQEMQA K LNRIS
Sbjct: 175 VYARVFGNPENLYAYPNSYQLMGSATPRLRRQEMQAHKSLNRIS 218


>ref|XP_003529322.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H1-like [Glycine max]
          Length = 248

 Score =  316 bits (809), Expect = 6e-84
 Identities = 163/234 (69%), Positives = 182/234 (77%), Gaps = 14/234 (5%)
 Frame = -3

Query: 831 MAFQHYCSHESKTIPNA----VTETENPNGCFDCNICLDFAHEPVVTLCGHLYCWPCIYK 664
           MA +HY S E KT P+     +T TEN +GCFDCNICLDFAHEPVVTLCGHLYCWPCIYK
Sbjct: 1   MALEHYLSQEWKTSPSPSPSPMTVTENLDGCFDCNICLDFAHEPVVTLCGHLYCWPCIYK 60

Query: 663 WLHVQSDSLGPDEHPQCPVCKVDISHSTMIPLYGRGQA-----PPGGKSSRGDVFIPPRP 499
           WLHVQS SL PDEHPQCPVCK DI H+TM+PLYGRGQ        G  SS    FIPPRP
Sbjct: 61  WLHVQSASLAPDEHPQCPVCKDDICHTTMVPLYGRGQGIAHSDRDGKASSYRGSFIPPRP 120

Query: 498 TASGAQALLTTASQSGQQLQYRNPYQGQHFSSPPYQEED-ATSQMLNLGASM-TPG-SHH 328
            A GAQ+L++T+SQS QQL YRNPYQ QHF+ P YQ+ED ++SQMLN GA+M  PG  H 
Sbjct: 121 PALGAQSLMSTSSQSAQQLPYRNPYQNQHFNPPLYQDEDESSSQMLNPGANMVAPGFPHL 180

Query: 327 PVGMFGEMVFARVFGNSENLFAYPNSYQLMGS--NSSRLRRQEMQADKFLNRIS 172
            VGMFGEM++ARVFGNSENL+ YPNSY L GS  NS RLRRQEMQA+K LNRIS
Sbjct: 181 VVGMFGEMLYARVFGNSENLYNYPNSYHLGGSNNNSPRLRRQEMQANKSLNRIS 234


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