BLASTX nr result

ID: Glycyrrhiza24_contig00008078 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00008078
         (592 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003541539.1| PREDICTED: uncharacterized protein LOC100793...   362   3e-98
ref|XP_003637386.1| hypothetical protein MTR_084s0009 [Medicago ...   353   9e-96
ref|XP_002519035.1| conserved hypothetical protein [Ricinus comm...   344   7e-93
ref|XP_004170159.1| PREDICTED: mediator of RNA polymerase II tra...   337   9e-91
ref|XP_004146647.1| PREDICTED: mediator of RNA polymerase II tra...   337   9e-91

>ref|XP_003541539.1| PREDICTED: uncharacterized protein LOC100793949 [Glycine max]
          Length = 1244

 Score =  362 bits (929), Expect = 3e-98
 Identities = 170/197 (86%), Positives = 173/197 (87%)
 Frame = -2

Query: 591 VTIWTQPSQGPANLVRDASCWQREHEWRQDIAVVTKWLSGVSPYRWLSSKSSAPTNSKLA 412
           VTIWTQP QGPANLV D SCWQREHEWRQDIAVVTKWLSGVSPYRWLSSKSSAP NSKL 
Sbjct: 181 VTIWTQPPQGPANLVHDTSCWQREHEWRQDIAVVTKWLSGVSPYRWLSSKSSAPANSKLT 240

Query: 411 FEEKFLSQQSQTSARWPNFLCVCSVFSSGSVQLHWSQWPPSQNGSTPKWFCTSKGLLGCG 232
           FEEK+LSQQSQTSARWPNFLCVCSVFSSGSVQLHWSQWPP+QNG+TPKWFCTSKGLLGCG
Sbjct: 241 FEEKYLSQQSQTSARWPNFLCVCSVFSSGSVQLHWSQWPPTQNGTTPKWFCTSKGLLGCG 300

Query: 231 PSGIMAGDAIITDSGAMHVAGVPIVNPSTIVVWEVTPGPGNGFQXXXXXXXXXXXXXXXX 52
           PSGIMAGDAIITDSGAMHVAGVPIVNPSTIVVWEV PGPGNGFQ                
Sbjct: 301 PSGIMAGDAIITDSGAMHVAGVPIVNPSTIVVWEVAPGPGNGFQVTPKTSTTCGVPPLSP 360

Query: 51  PNWAGFAPLAAYLFSWQ 1
           PNW GFA LAAYLFSWQ
Sbjct: 361 PNWDGFAALAAYLFSWQ 377


>ref|XP_003637386.1| hypothetical protein MTR_084s0009 [Medicago truncatula]
           gi|355503321|gb|AES84524.1| hypothetical protein
           MTR_084s0009 [Medicago truncatula]
          Length = 1245

 Score =  353 bits (907), Expect = 9e-96
 Identities = 168/197 (85%), Positives = 172/197 (87%)
 Frame = -2

Query: 591 VTIWTQPSQGPANLVRDASCWQREHEWRQDIAVVTKWLSGVSPYRWLSSKSSAPTNSKLA 412
           VTIWTQPSQGPANLVRDASCW+REHEWRQDIAV TKWLSGVSPYRWLSSKSSA  +SKL 
Sbjct: 176 VTIWTQPSQGPANLVRDASCWRREHEWRQDIAVATKWLSGVSPYRWLSSKSSATPDSKLT 235

Query: 411 FEEKFLSQQSQTSARWPNFLCVCSVFSSGSVQLHWSQWPPSQNGSTPKWFCTSKGLLGCG 232
           FEEKFLSQQSQTSARWPNFLCVCSVFSSGSVQLHWSQWPP+Q  STP+WF TSKGLLGCG
Sbjct: 236 FEEKFLSQQSQTSARWPNFLCVCSVFSSGSVQLHWSQWPPNQKDSTPRWFHTSKGLLGCG 295

Query: 231 PSGIMAGDAIITDSGAMHVAGVPIVNPSTIVVWEVTPGPGNGFQXXXXXXXXXXXXXXXX 52
           PSGIMAGDAIITDSGAMHVAGVPIVNPSTIVVWEVTPGPGNGFQ                
Sbjct: 296 PSGIMAGDAIITDSGAMHVAGVPIVNPSTIVVWEVTPGPGNGFQSCPMTSTKSGVPPHIP 355

Query: 51  PNWAGFAPLAAYLFSWQ 1
           PNW GFAPLAAYLF WQ
Sbjct: 356 PNWDGFAPLAAYLFCWQ 372


>ref|XP_002519035.1| conserved hypothetical protein [Ricinus communis]
           gi|223541698|gb|EEF43246.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1255

 Score =  344 bits (882), Expect = 7e-93
 Identities = 162/198 (81%), Positives = 172/198 (86%), Gaps = 1/198 (0%)
 Frame = -2

Query: 591 VTIWTQPSQGPANLVRDASCWQREHEWRQDIAVVTKWLSGVSPYRWLSSKSSAPTNSKLA 412
           +TIWTQPSQGP N+VRDASCWQREHEWRQDIAVVTKWLSGVSPYRWLSSKSS+ TNSK  
Sbjct: 180 ITIWTQPSQGPVNMVRDASCWQREHEWRQDIAVVTKWLSGVSPYRWLSSKSSSSTNSKST 239

Query: 411 FEEKFLSQQSQTSARWPNFLCVCSVFSSGSVQLHWSQWPPSQNGSTPKWFCTSKGLLGCG 232
           FEEKFLSQQSQTSARWPNFLCVCSVFSSGSVQLHWSQWPPS+  +TP+WFCTSKGLLG G
Sbjct: 240 FEEKFLSQQSQTSARWPNFLCVCSVFSSGSVQLHWSQWPPSRTNATPEWFCTSKGLLGAG 299

Query: 231 PSGIMAGDAIITDSGAMHVAGVPIVNPSTIVVWEVTPGPGNGFQ-XXXXXXXXXXXXXXX 55
           PSGIMA DAI+TDSGAMHVAGVPIVNPST+VVWEVTPG G+GFQ                
Sbjct: 300 PSGIMAADAIVTDSGAMHVAGVPIVNPSTVVVWEVTPGLGHGFQATPKTSISNGVPPSLN 359

Query: 54  XPNWAGFAPLAAYLFSWQ 1
            PNW+GFAPLAAYLFSWQ
Sbjct: 360 PPNWSGFAPLAAYLFSWQ 377


>ref|XP_004170159.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           16-like [Cucumis sativus]
          Length = 1143

 Score =  337 bits (864), Expect = 9e-91
 Identities = 163/197 (82%), Positives = 170/197 (86%), Gaps = 1/197 (0%)
 Frame = -2

Query: 588 TIWTQPSQGPANLVRDASCWQREHEWRQDIAVVTKWLSGVSPYRWLSSKSSAPTNSKLAF 409
           TIWTQPS+GPANLVRDASCWQ EHEWRQDIAVVTKWLSG+S YRWLSSKS++ +NSK  F
Sbjct: 67  TIWTQPSRGPANLVRDASCWQLEHEWRQDIAVVTKWLSGLSAYRWLSSKSNS-SNSKPNF 125

Query: 408 EEKFLSQQSQTSARWPNFLCVCSVFSSGSVQLHWSQWPPSQNGSTPKWFCTSKGLLGCGP 229
           EEKFL QQSQTSARWPNFLCVCSVFSSGSVQLHWSQWPPSQN S PKWFCTSKGLLG GP
Sbjct: 126 EEKFLPQQSQTSARWPNFLCVCSVFSSGSVQLHWSQWPPSQNSSPPKWFCTSKGLLGAGP 185

Query: 228 SGIMAGDAIITDSGAMHVAGVPIVNPSTIVVWEVTPGPGNGFQ-XXXXXXXXXXXXXXXX 52
           SGIMA DAIITDSGAMHVAGVPIVNPST+VVWEVTPGPGNGFQ                 
Sbjct: 186 SGIMAADAIITDSGAMHVAGVPIVNPSTVVVWEVTPGPGNGFQATPKTTTNNGVPAPLNP 245

Query: 51  PNWAGFAPLAAYLFSWQ 1
           PNW+GFAPLAAYLFSWQ
Sbjct: 246 PNWSGFAPLAAYLFSWQ 262


>ref|XP_004146647.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           16-like [Cucumis sativus]
          Length = 1220

 Score =  337 bits (864), Expect = 9e-91
 Identities = 163/197 (82%), Positives = 170/197 (86%), Gaps = 1/197 (0%)
 Frame = -2

Query: 588 TIWTQPSQGPANLVRDASCWQREHEWRQDIAVVTKWLSGVSPYRWLSSKSSAPTNSKLAF 409
           TIWTQPS+GPANLVRDASCWQ EHEWRQDIAVVTKWLSG+S YRWLSSKS++ +NSK  F
Sbjct: 144 TIWTQPSRGPANLVRDASCWQLEHEWRQDIAVVTKWLSGLSAYRWLSSKSNS-SNSKPNF 202

Query: 408 EEKFLSQQSQTSARWPNFLCVCSVFSSGSVQLHWSQWPPSQNGSTPKWFCTSKGLLGCGP 229
           EEKFL QQSQTSARWPNFLCVCSVFSSGSVQLHWSQWPPSQN S PKWFCTSKGLLG GP
Sbjct: 203 EEKFLPQQSQTSARWPNFLCVCSVFSSGSVQLHWSQWPPSQNSSPPKWFCTSKGLLGAGP 262

Query: 228 SGIMAGDAIITDSGAMHVAGVPIVNPSTIVVWEVTPGPGNGFQ-XXXXXXXXXXXXXXXX 52
           SGIMA DAIITDSGAMHVAGVPIVNPST+VVWEVTPGPGNGFQ                 
Sbjct: 263 SGIMAADAIITDSGAMHVAGVPIVNPSTVVVWEVTPGPGNGFQATPKTTTNNGVPAPLNP 322

Query: 51  PNWAGFAPLAAYLFSWQ 1
           PNW+GFAPLAAYLFSWQ
Sbjct: 323 PNWSGFAPLAAYLFSWQ 339


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