BLASTX nr result
ID: Glycyrrhiza24_contig00008043
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza24_contig00008043
(1242 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003552404.1| PREDICTED: E3 ubiquitin-protein ligase At3g0... 323 7e-86
ref|XP_003534550.1| PREDICTED: E3 ubiquitin-protein ligase At3g0... 320 6e-85
ref|XP_003548668.1| PREDICTED: uncharacterized protein LOC100804... 317 1e-84
ref|XP_003528846.1| PREDICTED: E3 ubiquitin-protein ligase At3g0... 304 4e-80
ref|XP_003622501.1| RING finger protein [Medicago truncatula] gi... 285 1e-74
>ref|XP_003552404.1| PREDICTED: E3 ubiquitin-protein ligase At3g02290-like [Glycine max]
Length = 184
Score = 323 bits (827), Expect = 7e-86
Identities = 155/188 (82%), Positives = 166/188 (88%)
Frame = +2
Query: 242 MGGCCCSARKHHLQGTLTPVYYYCPPTFEERESLTSNDGTTASLTAGFLFGLNLETSVPD 421
MGGCCCSARK HLQG PVYYYCPPTFEERESLTSNDG AS+ AGFL GLNLE S+PD
Sbjct: 1 MGGCCCSARKPHLQGA--PVYYYCPPTFEERESLTSNDGLNASVNAGFLVGLNLEASMPD 58
Query: 422 TFRSPPVPLPYDMVFGGSASADSESGRETVSVSSFETSITRDDIEESDCKAQAKSAPISP 601
TF+ PPVPLPYDMV GGSAS DSESGRETVS SFETSIT +D+EESDCKAQA SAP SP
Sbjct: 59 TFQPPPVPLPYDMVLGGSASTDSESGRETVS--SFETSITLEDVEESDCKAQANSAPTSP 116
Query: 602 GKAELSKSNGTQVLVTEEEDVCPICLDEYDDENPKNLTNCEHHFHLACILDWMERSDSCP 781
KA+LSKSN TQ LVTEEEDVCPICL+E+D ENP+NLT CEHHFHL+CIL+WMERSDSCP
Sbjct: 117 KKAQLSKSNVTQELVTEEEDVCPICLEEFDVENPRNLTKCEHHFHLSCILEWMERSDSCP 176
Query: 782 ICDQEMIF 805
ICDQEMIF
Sbjct: 177 ICDQEMIF 184
>ref|XP_003534550.1| PREDICTED: E3 ubiquitin-protein ligase At3g02290-like [Glycine max]
Length = 184
Score = 320 bits (819), Expect = 6e-85
Identities = 155/188 (82%), Positives = 165/188 (87%)
Frame = +2
Query: 242 MGGCCCSARKHHLQGTLTPVYYYCPPTFEERESLTSNDGTTASLTAGFLFGLNLETSVPD 421
MGGCCCSARK HLQG PVYYYCPPTFEERESLTSN+GT AS+ AGFL GLNLE S+PD
Sbjct: 1 MGGCCCSARKPHLQGA--PVYYYCPPTFEERESLTSNNGTNASVNAGFLIGLNLEASMPD 58
Query: 422 TFRSPPVPLPYDMVFGGSASADSESGRETVSVSSFETSITRDDIEESDCKAQAKSAPISP 601
TF+SPPVPLPYDMV GGSAS SESGRETVS SFET ITR+D+EESDCKAQA SA SP
Sbjct: 59 TFQSPPVPLPYDMVLGGSASTYSESGRETVS--SFETLITREDVEESDCKAQANSALTSP 116
Query: 602 GKAELSKSNGTQVLVTEEEDVCPICLDEYDDENPKNLTNCEHHFHLACILDWMERSDSCP 781
KA+L KSN TQVLVTEEEDVCPICL+EYD ENP NLT CEHHFHL+CIL+WMERSDSCP
Sbjct: 117 RKAQLPKSNVTQVLVTEEEDVCPICLEEYDVENPSNLTKCEHHFHLSCILEWMERSDSCP 176
Query: 782 ICDQEMIF 805
ICDQEMIF
Sbjct: 177 ICDQEMIF 184
>ref|XP_003548668.1| PREDICTED: uncharacterized protein LOC100804435 [Glycine max]
Length = 227
Score = 317 bits (812), Expect(2) = 1e-84
Identities = 152/194 (78%), Positives = 161/194 (82%)
Frame = +2
Query: 224 KKNYWKMGGCCCSARKHHLQGTLTPVYYYCPPTFEERESLTSNDGTTASLTAGFLFGLNL 403
+K+ WKMGGCCCSARK HL GT PVYYYCPPT EERESLTSNDG SLT G L GLNL
Sbjct: 31 EKDCWKMGGCCCSARKPHLHGT--PVYYYCPPTLEERESLTSNDGRAMSLTTGLLVGLNL 88
Query: 404 ETSVPDTFRSPPVPLPYDMVFGGSASADSESGRETVSVSSFETSITRDDIEESDCKAQAK 583
ETS PDT++SPP P PYDMV GG AS DSESGR TVS SSFET IT DD+EESDCKA+A
Sbjct: 89 ETSTPDTYQSPPAPPPYDMVLGGPASTDSESGRVTVSGSSFETLITCDDLEESDCKAKAN 148
Query: 584 SAPISPGKAELSKSNGTQVLVTEEEDVCPICLDEYDDENPKNLTNCEHHFHLACILDWME 763
SAPISP KAELSKS LVTEEED CPICLDEYD ENPK LT CEHHFHL+CIL+WME
Sbjct: 149 SAPISPSKAELSKSKEFHALVTEEEDGCPICLDEYDVENPKTLTKCEHHFHLSCILEWME 208
Query: 764 RSDSCPICDQEMIF 805
RSDSCPIC+QEMIF
Sbjct: 209 RSDSCPICNQEMIF 222
Score = 24.3 bits (51), Expect(2) = 1e-84
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +3
Query: 153 MIPF*CQITKKNETINDTFD*ITER 227
+I F ITK+N+ I FD +TE+
Sbjct: 8 LILFRSHITKENDNITGRFDYLTEK 32
>ref|XP_003528846.1| PREDICTED: E3 ubiquitin-protein ligase At3g02290-like [Glycine max]
Length = 191
Score = 304 bits (778), Expect = 4e-80
Identities = 147/188 (78%), Positives = 152/188 (80%)
Frame = +2
Query: 242 MGGCCCSARKHHLQGTLTPVYYYCPPTFEERESLTSNDGTTASLTAGFLFGLNLETSVPD 421
MGGCCCSARK HL GT PVYYYCPPT EE ESLTSNDGT SLT G L GLNLETS PD
Sbjct: 1 MGGCCCSARKPHLHGT--PVYYYCPPTLEEHESLTSNDGTATSLTTGLLVGLNLETSTPD 58
Query: 422 TFRSPPVPLPYDMVFGGSASADSESGRETVSVSSFETSITRDDIEESDCKAQAKSAPISP 601
T+ PP PLPYDMV GG AS DSESGRETVS SSFET IT D EESDCK +A SAPISP
Sbjct: 59 TYHPPPAPLPYDMVLGGPASTDSESGRETVSGSSFETLITCKDPEESDCKIKANSAPISP 118
Query: 602 GKAELSKSNGTQVLVTEEEDVCPICLDEYDDENPKNLTNCEHHFHLACILDWMERSDSCP 781
KA LSKS LVTEEED CPICL+EYD ENPK LT CEHHFHL+CIL+WMERSDSCP
Sbjct: 119 SKAGLSKSKEFHALVTEEEDGCPICLEEYDVENPKTLTKCEHHFHLSCILEWMERSDSCP 178
Query: 782 ICDQEMIF 805
ICDQEMIF
Sbjct: 179 ICDQEMIF 186
>ref|XP_003622501.1| RING finger protein [Medicago truncatula]
gi|357514547|ref|XP_003627562.1| RING finger protein
[Medicago truncatula] gi|355497516|gb|AES78719.1| RING
finger protein [Medicago truncatula]
gi|355521584|gb|AET02038.1| RING finger protein
[Medicago truncatula] gi|388504160|gb|AFK40146.1|
unknown [Medicago truncatula]
Length = 191
Score = 285 bits (730), Expect = 1e-74
Identities = 137/188 (72%), Positives = 149/188 (79%)
Frame = +2
Query: 242 MGGCCCSARKHHLQGTLTPVYYYCPPTFEERESLTSNDGTTASLTAGFLFGLNLETSVPD 421
MGGCCCSARK HL GT PVYYYCPP EE + L SND SLTAG L GLN+E S PD
Sbjct: 1 MGGCCCSARKTHLHGT--PVYYYCPPILEEHDPLASNDAANDSLTAGLLVGLNVEESTPD 58
Query: 422 TFRSPPVPLPYDMVFGGSASADSESGRETVSVSSFETSITRDDIEESDCKAQAKSAPISP 601
T++ PP PLPYD+V G S DSESG++TVS SSFET +T +DIEESD KAQAKSAPISP
Sbjct: 59 TYQPPPAPLPYDVVLGVPVSTDSESGKDTVSGSSFETLVTCEDIEESDLKAQAKSAPISP 118
Query: 602 GKAELSKSNGTQVLVTEEEDVCPICLDEYDDENPKNLTNCEHHFHLACILDWMERSDSCP 781
KAEL KSN LV EEED CPICL+EYD ENPK L+ CEHHFHLACIL+WMERSDSCP
Sbjct: 119 TKAELWKSNELHALVIEEEDGCPICLEEYDVENPKTLSKCEHHFHLACILEWMERSDSCP 178
Query: 782 ICDQEMIF 805
ICDQEMIF
Sbjct: 179 ICDQEMIF 186